EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000000093 (Gene tree)
Gene ID: 102699189
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 15532 bases
Position: chrJH591430.1:23894-39425
Accession: 102699189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000108	RTC	PF01137.21	1.9e-85	1	1
ENSLOCP00000000108	RTC_insert	PF05189.13	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000108	-	5256	XM_006643080	ENSLOCP00000000108	367 (aa)	XP_006643143	W5LVF1

Gene Model

Click here to download ENSLOCG00000000093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000093	rtca	99	73.224	ENSG00000137996	RTCA	100	73.224	Homo_sapiens
ENSLOCG00000000093	rtca	99	74.795	ENSAPOG00000001345	rtca	99	74.795	Acanthochromis_polyacanthus
ENSLOCG00000000093	rtca	73	73.606	ENSAMEG00000008855	RTCA	100	73.606	Ailuropoda_melanoleuca
ENSLOCG00000000093	rtca	99	75.068	ENSACIG00000019643	rtca	100	75.068	Amphilophus_citrinellus
ENSLOCG00000000093	rtca	99	74.795	ENSAOCG00000014979	rtca	99	74.795	Amphiprion_ocellaris
ENSLOCG00000000093	rtca	99	74.795	ENSAPEG00000006945	rtca	99	74.795	Amphiprion_percula
ENSLOCG00000000093	rtca	95	76.000	ENSATEG00000006315	rtca	96	76.000	Anabas_testudineus
ENSLOCG00000000093	rtca	95	67.705	ENSAPLG00000015430	RTCA	100	67.705	Anas_platyrhynchos
ENSLOCG00000000093	rtca	99	72.678	ENSANAG00000025446	RTCA	100	72.678	Aotus_nancymaae
ENSLOCG00000000093	rtca	99	74.795	ENSACLG00000020770	rtca	99	74.795	Astatotilapia_calliptera
ENSLOCG00000000093	rtca	99	79.178	ENSAMXG00000043271	rtca	100	79.178	Astyanax_mexicanus
ENSLOCG00000000093	rtca	99	73.224	ENSBTAG00000006321	RTCA	100	73.224	Bos_taurus
ENSLOCG00000000093	rtca	99	72.678	ENSCJAG00000003398	RTCA	100	72.678	Callithrix_jacchus
ENSLOCG00000000093	rtca	99	72.678	ENSCAFG00000020010	RTCA	68	72.678	Canis_familiaris
ENSLOCG00000000093	rtca	99	72.678	ENSCAFG00020011528	RTCA	57	72.678	Canis_lupus_dingo
ENSLOCG00000000093	rtca	99	72.951	ENSCHIG00000018937	RTCA	100	72.951	Capra_hircus
ENSLOCG00000000093	rtca	99	72.404	ENSTSYG00000011305	RTCA	100	72.404	Carlito_syrichta
ENSLOCG00000000093	rtca	99	72.404	ENSCCAG00000021844	RTCA	99	74.174	Cebus_capucinus
ENSLOCG00000000093	rtca	99	70.449	ENSCATG00000019364	RTCA	100	72.492	Cercocebus_atys
ENSLOCG00000000093	rtca	86	74.051	ENSCLAG00000006125	RTCA	100	74.051	Chinchilla_lanigera
ENSLOCG00000000093	rtca	99	72.951	ENSCSAG00000001509	RTCA	100	72.951	Chlorocebus_sabaeus
ENSLOCG00000000093	rtca	99	72.603	ENSCHOG00000005211	RTCA	99	72.603	Choloepus_hoffmanni
ENSLOCG00000000093	rtca	99	69.890	ENSCPBG00000026658	RTCA	99	69.890	Chrysemys_picta_bellii
ENSLOCG00000000093	rtca	98	55.028	ENSCING00000007875	-	98	55.028	Ciona_intestinalis
ENSLOCG00000000093	rtca	98	54.469	ENSCSAVG00000007269	-	98	54.469	Ciona_savignyi
ENSLOCG00000000093	rtca	99	72.678	ENSCANG00000040106	RTCA	100	72.678	Colobus_angolensis_palliatus
ENSLOCG00000000093	rtca	73	73.606	ENSCGRG00001013163	Rtca	85	73.606	Cricetulus_griseus_chok1gshd
ENSLOCG00000000093	rtca	99	71.978	ENSCSEG00000000530	rtca	98	71.978	Cynoglossus_semilaevis
ENSLOCG00000000093	rtca	99	61.622	ENSCVAG00000021809	rtca	100	61.622	Cyprinodon_variegatus
ENSLOCG00000000093	rtca	99	80.274	ENSDARG00000002215	rtca	100	80.274	Danio_rerio
ENSLOCG00000000093	rtca	99	73.425	ENSDNOG00000000456	RTCA	99	73.425	Dasypus_novemcinctus
ENSLOCG00000000093	rtca	99	74.044	ENSDORG00000005448	Rtca	100	74.044	Dipodomys_ordii
ENSLOCG00000000093	rtca	98	39.335	FBgn0025630	Rtca	99	39.335	Drosophila_melanogaster
ENSLOCG00000000093	rtca	95	51.862	ENSEBUG00000008556	rtca	96	51.862	Eptatretus_burgeri
ENSLOCG00000000093	rtca	99	73.770	ENSEASG00005015926	RTCA	100	73.770	Equus_asinus_asinus
ENSLOCG00000000093	rtca	99	73.770	ENSECAG00000019831	RTCA	100	73.770	Equus_caballus
ENSLOCG00000000093	rtca	91	66.763	ENSEEUG00000001165	RTCA	100	66.763	Erinaceus_europaeus
ENSLOCG00000000093	rtca	99	79.614	ENSELUG00000003741	rtca	99	79.614	Esox_lucius
ENSLOCG00000000093	rtca	99	72.951	ENSFCAG00000024460	RTCA	100	72.951	Felis_catus
ENSLOCG00000000093	rtca	92	68.639	ENSFALG00000002443	RTCA	91	68.639	Ficedula_albicollis
ENSLOCG00000000093	rtca	95	60.340	ENSFDAG00000016084	-	97	60.340	Fukomys_damarensis
ENSLOCG00000000093	rtca	99	73.224	ENSFDAG00000012070	-	100	73.224	Fukomys_damarensis
ENSLOCG00000000093	rtca	55	77.612	ENSFHEG00000002868	rtca	97	70.925	Fundulus_heteroclitus
ENSLOCG00000000093	rtca	99	74.795	ENSGMOG00000013264	rtca	100	74.795	Gadus_morhua
ENSLOCG00000000093	rtca	99	68.493	ENSGALG00000005277	RTCA	100	68.493	Gallus_gallus
ENSLOCG00000000093	rtca	99	74.521	ENSGAFG00000011853	rtca	99	74.521	Gambusia_affinis
ENSLOCG00000000093	rtca	99	75.616	ENSGACG00000013497	rtca	100	75.616	Gasterosteus_aculeatus
ENSLOCG00000000093	rtca	80	69.283	ENSGAGG00000023306	RTCA	100	69.283	Gopherus_agassizii
ENSLOCG00000000093	rtca	99	72.131	ENSGGOG00000044018	-	100	72.131	Gorilla_gorilla
ENSLOCG00000000093	rtca	99	72.678	ENSGGOG00000009546	-	100	72.678	Gorilla_gorilla
ENSLOCG00000000093	rtca	99	74.795	ENSHBUG00000002114	rtca	99	74.795	Haplochromis_burtoni
ENSLOCG00000000093	rtca	99	73.224	ENSHGLG00000002617	RTCA	100	73.224	Heterocephalus_glaber_female
ENSLOCG00000000093	rtca	99	73.224	ENSHGLG00100006056	RTCA	100	73.224	Heterocephalus_glaber_male
ENSLOCG00000000093	rtca	100	68.665	ENSHCOG00000020628	rtca	90	68.665	Hippocampus_comes
ENSLOCG00000000093	rtca	99	79.178	ENSIPUG00000024803	rtca	100	79.178	Ictalurus_punctatus
ENSLOCG00000000093	rtca	99	64.208	ENSSTOG00000033099	-	100	64.208	Ictidomys_tridecemlineatus
ENSLOCG00000000093	rtca	99	67.760	ENSSTOG00000013528	-	100	67.760	Ictidomys_tridecemlineatus
ENSLOCG00000000093	rtca	99	51.913	ENSJJAG00000016178	Rtca	100	51.913	Jaculus_jaculus
ENSLOCG00000000093	rtca	99	73.425	ENSKMAG00000006651	rtca	99	73.425	Kryptolebias_marmoratus
ENSLOCG00000000093	rtca	87	77.188	ENSLBEG00000002448	-	99	77.188	Labrus_bergylta
ENSLOCG00000000093	rtca	98	78.212	ENSLBEG00000028971	rtca	98	78.212	Labrus_bergylta
ENSLOCG00000000093	rtca	99	71.507	ENSLACG00000013666	RTCA	100	71.507	Latimeria_chalumnae
ENSLOCG00000000093	rtca	99	72.404	ENSLAFG00000001473	RTCA	100	72.404	Loxodonta_africana
ENSLOCG00000000093	rtca	99	72.951	ENSMFAG00000034132	RTCA	100	72.951	Macaca_fascicularis
ENSLOCG00000000093	rtca	99	72.951	ENSMMUG00000019105	RTCA	100	72.951	Macaca_mulatta
ENSLOCG00000000093	rtca	84	72.492	ENSMNEG00000037163	RTCA	100	72.492	Macaca_nemestrina
ENSLOCG00000000093	rtca	99	59.563	ENSMLEG00000042151	RTCA	100	59.563	Mandrillus_leucophaeus
ENSLOCG00000000093	rtca	99	75.342	ENSMAMG00000016536	rtca	100	75.342	Mastacembelus_armatus
ENSLOCG00000000093	rtca	99	74.795	ENSMZEG00005017945	rtca	99	74.795	Maylandia_zebra
ENSLOCG00000000093	rtca	87	68.553	ENSMGAG00000006892	RTCA	99	68.553	Meleagris_gallopavo
ENSLOCG00000000093	rtca	99	73.497	ENSMAUG00000008488	Rtca	100	73.497	Mesocricetus_auratus
ENSLOCG00000000093	rtca	84	72.492	ENSMICG00000008643	RTCA	100	72.492	Microcebus_murinus
ENSLOCG00000000093	rtca	99	72.131	ENSMOCG00000016660	Rtca	100	72.131	Microtus_ochrogaster
ENSLOCG00000000093	rtca	83	75.490	ENSMMOG00000007750	rtca	99	75.490	Mola_mola
ENSLOCG00000000093	rtca	99	75.956	ENSMODG00000003557	RTCA	100	75.956	Monodelphis_domestica
ENSLOCG00000000093	rtca	99	75.068	ENSMALG00000020844	rtca	100	75.068	Monopterus_albus
ENSLOCG00000000093	rtca	99	72.404	MGP_CAROLIEiJ_G0025565	Rtca	100	73.239	Mus_caroli
ENSLOCG00000000093	rtca	99	71.858	ENSMUSG00000000339	Rtca	100	73.239	Mus_musculus
ENSLOCG00000000093	rtca	99	72.404	MGP_PahariEiJ_G0027011	Rtca	100	73.239	Mus_pahari
ENSLOCG00000000093	rtca	99	72.131	MGP_SPRETEiJ_G0026515	Rtca	100	72.535	Mus_spretus
ENSLOCG00000000093	rtca	99	73.497	ENSMPUG00000012119	RTCA	100	73.497	Mustela_putorius_furo
ENSLOCG00000000093	rtca	99	70.027	ENSMLUG00000009922	RTCA	100	70.027	Myotis_lucifugus
ENSLOCG00000000093	rtca	99	72.678	ENSNGAG00000011540	Rtca	99	72.678	Nannospalax_galili
ENSLOCG00000000093	rtca	99	74.795	ENSNBRG00000003062	rtca	99	74.795	Neolamprologus_brichardi
ENSLOCG00000000093	rtca	99	73.224	ENSNLEG00000031426	RTCA	100	73.224	Nomascus_leucogenys
ENSLOCG00000000093	rtca	73	69.517	ENSOPRG00000012092	RTCA	71	69.517	Ochotona_princeps
ENSLOCG00000000093	rtca	95	73.276	ENSODEG00000006990	RTCA	96	73.504	Octodon_degus
ENSLOCG00000000093	rtca	99	74.521	ENSONIG00000007753	rtca	99	74.521	Oreochromis_niloticus
ENSLOCG00000000093	rtca	86	72.240	ENSOANG00000012055	RTCA	98	72.240	Ornithorhynchus_anatinus
ENSLOCG00000000093	rtca	99	73.224	ENSOCUG00000014247	RTCA	100	73.224	Oryctolagus_cuniculus
ENSLOCG00000000093	rtca	99	76.712	ENSORLG00000013605	rtca	100	76.712	Oryzias_latipes
ENSLOCG00000000093	rtca	99	76.986	ENSORLG00020001904	rtca	100	76.986	Oryzias_latipes_hni
ENSLOCG00000000093	rtca	99	76.986	ENSORLG00015021064	rtca	100	76.986	Oryzias_latipes_hsok
ENSLOCG00000000093	rtca	99	75.616	ENSOMEG00000000756	rtca	100	75.616	Oryzias_melastigma
ENSLOCG00000000093	rtca	99	65.574	ENSOGAG00000005627	RTCA	100	65.574	Otolemur_garnettii
ENSLOCG00000000093	rtca	86	73.270	ENSOARG00000018122	RTCA	100	73.270	Ovis_aries
ENSLOCG00000000093	rtca	99	70.449	ENSPPAG00000035119	RTCA	100	72.492	Pan_paniscus
ENSLOCG00000000093	rtca	99	73.224	ENSPPRG00000000350	RTCA	100	73.224	Panthera_pardus
ENSLOCG00000000093	rtca	99	72.951	ENSPTIG00000012816	RTCA	100	72.951	Panthera_tigris_altaica
ENSLOCG00000000093	rtca	99	70.185	ENSPTRG00000001004	RTCA	100	72.168	Pan_troglodytes
ENSLOCG00000000093	rtca	99	72.951	ENSPANG00000000346	RTCA	100	72.951	Papio_anubis
ENSLOCG00000000093	rtca	99	80.274	ENSPKIG00000001653	rtca	100	80.274	Paramormyrops_kingsleyae
ENSLOCG00000000093	rtca	99	69.315	ENSPSIG00000011408	RTCA	100	69.315	Pelodiscus_sinensis
ENSLOCG00000000093	rtca	99	72.678	ENSPEMG00000018582	Rtca	100	72.678	Peromyscus_maniculatus_bairdii
ENSLOCG00000000093	rtca	98	56.825	ENSPMAG00000009110	rtca	98	56.825	Petromyzon_marinus
ENSLOCG00000000093	rtca	99	74.317	ENSPCIG00000007684	RTCA	100	74.317	Phascolarctos_cinereus
ENSLOCG00000000093	rtca	99	74.044	ENSPFOG00000004824	rtca	100	74.044	Poecilia_formosa
ENSLOCG00000000093	rtca	99	74.521	ENSPLAG00000011753	rtca	99	74.521	Poecilia_latipinna
ENSLOCG00000000093	rtca	99	74.521	ENSPMEG00000020469	rtca	99	74.521	Poecilia_mexicana
ENSLOCG00000000093	rtca	99	74.247	ENSPREG00000001365	rtca	99	74.247	Poecilia_reticulata
ENSLOCG00000000093	rtca	99	72.951	ENSPPYG00000001115	RTCA	100	72.951	Pongo_abelii
ENSLOCG00000000093	rtca	99	70.492	ENSPCAG00000005076	RTCA	100	70.492	Procavia_capensis
ENSLOCG00000000093	rtca	99	72.678	ENSPCOG00000005603	RTCA	100	72.678	Propithecus_coquereli
ENSLOCG00000000093	rtca	99	69.393	ENSPVAG00000009478	RTCA	100	69.393	Pteropus_vampyrus
ENSLOCG00000000093	rtca	99	74.795	ENSPNYG00000004722	rtca	99	74.795	Pundamilia_nyererei
ENSLOCG00000000093	rtca	99	79.452	ENSPNAG00000022270	rtca	100	79.452	Pygocentrus_nattereri
ENSLOCG00000000093	rtca	99	71.585	ENSRNOG00000014575	Rtca	100	71.585	Rattus_norvegicus
ENSLOCG00000000093	rtca	99	70.449	ENSRBIG00000041180	RTCA	100	72.492	Rhinopithecus_bieti
ENSLOCG00000000093	rtca	99	72.951	ENSRROG00000024929	RTCA	100	72.951	Rhinopithecus_roxellana
ENSLOCG00000000093	rtca	99	71.858	ENSSBOG00000028626	RTCA	100	71.858	Saimiri_boliviensis_boliviensis
ENSLOCG00000000093	rtca	99	74.317	ENSSHAG00000001758	RTCA	100	74.317	Sarcophilus_harrisii
ENSLOCG00000000093	rtca	97	76.338	ENSSMAG00000014680	rtca	96	76.338	Scophthalmus_maximus
ENSLOCG00000000093	rtca	97	77.746	ENSSDUG00000015585	rtca	96	77.746	Seriola_dumerili
ENSLOCG00000000093	rtca	99	75.549	ENSSLDG00000018985	rtca	98	75.549	Seriola_lalandi_dorsalis
ENSLOCG00000000093	rtca	86	69.085	ENSSARG00000013993	RTCA	100	69.085	Sorex_araneus
ENSLOCG00000000093	rtca	99	75.342	ENSSPAG00000011938	rtca	99	75.342	Stegastes_partitus
ENSLOCG00000000093	rtca	99	72.951	ENSSSCG00000006865	RTCA	100	72.951	Sus_scrofa
ENSLOCG00000000093	rtca	99	68.493	ENSTGUG00000005154	RTCA	100	68.493	Taeniopygia_guttata
ENSLOCG00000000093	rtca	99	76.164	ENSTRUG00000008799	rtca	100	76.164	Takifugu_rubripes
ENSLOCG00000000093	rtca	99	76.164	ENSTNIG00000004725	rtca	100	76.164	Tetraodon_nigroviridis
ENSLOCG00000000093	rtca	57	62.136	ENSTBEG00000000943	RTCA	59	62.136	Tupaia_belangeri
ENSLOCG00000000093	rtca	99	70.185	ENSTTRG00000015327	RTCA	100	70.185	Tursiops_truncatus
ENSLOCG00000000093	rtca	93	73.178	ENSUAMG00000017265	RTCA	96	73.178	Ursus_americanus
ENSLOCG00000000093	rtca	99	72.678	ENSUMAG00000007881	RTCA	100	72.678	Ursus_maritimus
ENSLOCG00000000093	rtca	86	64.984	ENSVPAG00000001039	RTCA	84	64.984	Vicugna_pacos
ENSLOCG00000000093	rtca	99	72.678	ENSVVUG00000022041	RTCA	68	72.678	Vulpes_vulpes
ENSLOCG00000000093	rtca	98	61.326	ENSXETG00000031661	RTCA	98	61.326	Xenopus_tropicalis
ENSLOCG00000000093	rtca	99	63.014	ENSXCOG00000008002	rtca	100	63.014	Xiphophorus_couchianus
ENSLOCG00000000093	rtca	99	74.247	ENSXMAG00000005482	rtca	99	74.247	Xiphophorus_maculatus