EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000106 (Gene tree)
Gene ID: 102683838
Gene Symbol: -
Alias: -
Full Name: cold-inducible RNA-binding protein B-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4077 bases
Position: chrJH591719.1:13252-17328
Accession: 102683838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000120	RRM_1	PF00076.22	5.5e-25	1	1
ENSLOCP00000000115	RRM_1	PF00076.22	7.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000115	-	642	-	ENSLOCP00000000115	213 (aa)	-	W5LVF8
ENSLOCT00000000120	-	547	XM_006643420	ENSLOCP00000000120	178 (aa)	XP_015195399	W5LVG3

Gene Model

Click here to download ENSLOCG00000000106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000106	-	61	45.946	ENSLOCG00000004675	msi2b	59	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000106	-	99	70.000	ENSG00000099622	CIRBP	98	92.308	Homo_sapiens
ENSLOCG00000000106	-	99	54.802	ENSAMEG00000012653	RBM3	51	74.390	Ailuropoda_melanoleuca
ENSLOCG00000000106	-	99	59.777	ENSAMEG00000003278	CIRBP	51	57.838	Ailuropoda_melanoleuca
ENSLOCG00000000106	-	53	88.542	ENSACAG00000000441	CIRBP	98	61.735	Anolis_carolinensis
ENSLOCG00000000106	-	98	55.618	ENSACAG00000013718	-	99	48.469	Anolis_carolinensis
ENSLOCG00000000106	-	67	72.500	ENSANAG00000027805	-	95	50.235	Aotus_nancymaae
ENSLOCG00000000106	-	98	49.714	ENSANAG00000028569	-	50	60.976	Aotus_nancymaae
ENSLOCG00000000106	-	99	68.156	ENSANAG00000036495	-	96	62.983	Aotus_nancymaae
ENSLOCG00000000106	-	98	55.429	ENSANAG00000028883	-	84	68.421	Aotus_nancymaae
ENSLOCG00000000106	-	54	68.041	ENSBTAG00000025848	RBM3	80	69.444	Bos_taurus
ENSLOCG00000000106	-	99	68.508	ENSBTAG00000007480	CIRBP	77	57.071	Bos_taurus
ENSLOCG00000000106	-	56	56.566	ENSCJAG00000047359	-	58	59.756	Callithrix_jacchus
ENSLOCG00000000106	-	56	67.677	ENSCJAG00000047341	-	84	68.421	Callithrix_jacchus
ENSLOCG00000000106	-	99	70.000	ENSCJAG00000005504	CIRBP	99	63.187	Callithrix_jacchus
ENSLOCG00000000106	-	89	48.947	ENSCAFG00000015485	RBM3	51	71.951	Canis_familiaris
ENSLOCG00000000106	-	99	70.950	ENSCAFG00000019506	CIRBP	90	63.736	Canis_familiaris
ENSLOCG00000000106	-	98	50.286	ENSCAFG00000016002	-	55	71.951	Canis_familiaris
ENSLOCG00000000106	-	99	70.950	ENSCAFG00020017138	CIRBP	90	63.736	Canis_lupus_dingo
ENSLOCG00000000106	-	56	66.667	ENSCAFG00020017705	-	69	71.951	Canis_lupus_dingo
ENSLOCG00000000106	-	58	66.346	ENSCHIG00000009007	RBM3	99	48.958	Capra_hircus
ENSLOCG00000000106	-	99	68.539	ENSCHIG00000021288	CIRBP	98	57.711	Capra_hircus
ENSLOCG00000000106	-	67	55.738	ENSTSYG00000031540	-	59	63.415	Carlito_syrichta
ENSLOCG00000000106	-	98	48.571	ENSTSYG00000035938	-	58	65.854	Carlito_syrichta
ENSLOCG00000000106	-	98	53.107	ENSCAPG00000005923	RBM3	51	73.171	Cavia_aperea
ENSLOCG00000000106	-	98	53.672	ENSCPOG00000003553	RBM3	52	74.390	Cavia_porcellus
ENSLOCG00000000106	-	56	67.677	ENSCCAG00000038019	-	84	68.421	Cebus_capucinus
ENSLOCG00000000106	-	91	61.735	ENSCCAG00000034994	CIRBP	98	57.426	Cebus_capucinus
ENSLOCG00000000106	-	98	45.506	ENSCCAG00000035552	-	55	57.317	Cebus_capucinus
ENSLOCG00000000106	-	99	71.978	ENSCATG00000042253	CIRBP	99	57.000	Cercocebus_atys
ENSLOCG00000000106	-	99	70.950	ENSCLAG00000016087	CIRBP	99	62.637	Chinchilla_lanigera
ENSLOCG00000000106	-	98	53.143	ENSCLAG00000002908	RBM3	52	74.390	Chinchilla_lanigera
ENSLOCG00000000106	-	99	69.444	ENSCSAG00000012245	CIRBP	98	57.921	Chlorocebus_sabaeus
ENSLOCG00000000106	-	89	47.368	ENSCHOG00000007642	RBM3	53	71.951	Choloepus_hoffmanni
ENSLOCG00000000106	-	99	66.480	ENSCPBG00000022930	CIRBP	99	59.259	Chrysemys_picta_bellii
ENSLOCG00000000106	-	98	58.523	ENSCPBG00000021863	-	99	55.866	Chrysemys_picta_bellii
ENSLOCG00000000106	-	99	70.000	ENSCANG00000037000	CIRBP	99	63.187	Colobus_angolensis_palliatus
ENSLOCG00000000106	-	98	43.429	ENSCANG00000031890	-	54	56.098	Colobus_angolensis_palliatus
ENSLOCG00000000106	-	98	53.143	ENSCGRG00001018909	Rbm3	53	74.390	Cricetulus_griseus_chok1gshd
ENSLOCG00000000106	-	98	53.143	ENSCGRG00000014636	Rbm3	53	74.390	Cricetulus_griseus_crigri
ENSLOCG00000000106	-	99	69.832	ENSCGRG00000013689	Cirbp	99	62.637	Cricetulus_griseus_crigri
ENSLOCG00000000106	-	69	54.098	ENSDNOG00000033435	-	96	41.361	Dasypus_novemcinctus
ENSLOCG00000000106	-	99	53.107	ENSDNOG00000035132	-	50	68.182	Dasypus_novemcinctus
ENSLOCG00000000106	-	98	53.977	ENSDNOG00000032565	-	53	73.171	Dasypus_novemcinctus
ENSLOCG00000000106	-	89	39.153	ENSDNOG00000043650	-	54	54.217	Dasypus_novemcinctus
ENSLOCG00000000106	-	98	48.571	ENSDNOG00000040058	-	51	63.855	Dasypus_novemcinctus
ENSLOCG00000000106	-	99	54.802	ENSDNOG00000049801	-	51	73.171	Dasypus_novemcinctus
ENSLOCG00000000106	-	99	70.391	ENSDORG00000023540	Cirbp	99	62.637	Dipodomys_ordii
ENSLOCG00000000106	-	68	42.742	ENSEASG00005023389	-	69	53.659	Equus_asinus_asinus
ENSLOCG00000000106	-	58	58.036	ENSEASG00005008251	RBM3	59	61.111	Equus_asinus_asinus
ENSLOCG00000000106	-	99	71.111	ENSEASG00005021677	CIRBP	74	63.388	Equus_asinus_asinus
ENSLOCG00000000106	-	58	68.269	ENSECAG00000024257	RBM3	80	72.222	Equus_caballus
ENSLOCG00000000106	-	100	65.922	ENSELUG00000019617	-	97	61.053	Esox_lucius
ENSLOCG00000000106	-	70	50.794	ENSFCAG00000021952	-	92	57.317	Felis_catus
ENSLOCG00000000106	-	99	69.832	ENSFCAG00000013724	CIRBP	99	62.088	Felis_catus
ENSLOCG00000000106	-	55	68.367	ENSFCAG00000002245	RBM3	51	74.390	Felis_catus
ENSLOCG00000000106	-	99	61.453	ENSFALG00000014000	CIRBP	95	61.582	Ficedula_albicollis
ENSLOCG00000000106	-	99	70.391	ENSFDAG00000002848	CIRBP	96	63.536	Fukomys_damarensis
ENSLOCG00000000106	-	98	53.143	ENSFDAG00000007909	RBM3	52	74.390	Fukomys_damarensis
ENSLOCG00000000106	-	99	72.067	ENSGALG00000030918	CIRBP	98	59.000	Gallus_gallus
ENSLOCG00000000106	-	98	58.523	ENSGAGG00000016473	-	99	55.866	Gopherus_agassizii
ENSLOCG00000000106	-	56	59.000	ENSGGOG00000025080	-	66	65.385	Gorilla_gorilla
ENSLOCG00000000106	-	99	70.000	ENSGGOG00000002338	CIRBP	98	57.921	Gorilla_gorilla
ENSLOCG00000000106	-	98	50.282	ENSHGLG00000013635	-	52	68.293	Heterocephalus_glaber_female
ENSLOCG00000000106	-	56	66.667	ENSHGLG00000006552	RBM3	53	74.390	Heterocephalus_glaber_female
ENSLOCG00000000106	-	99	71.508	ENSHGLG00000005839	CIRBP	99	63.736	Heterocephalus_glaber_female
ENSLOCG00000000106	-	74	62.687	ENSHGLG00000010919	-	59	73.171	Heterocephalus_glaber_female
ENSLOCG00000000106	-	99	71.508	ENSHGLG00100004955	CIRBP	99	63.736	Heterocephalus_glaber_male
ENSLOCG00000000106	-	56	66.667	ENSHGLG00100017487	-	52	74.390	Heterocephalus_glaber_male
ENSLOCG00000000106	-	98	50.282	ENSHGLG00100015330	-	52	68.293	Heterocephalus_glaber_male
ENSLOCG00000000106	-	53	61.458	ENSHGLG00100005516	-	97	43.719	Heterocephalus_glaber_male
ENSLOCG00000000106	-	74	62.687	ENSHGLG00100014556	-	59	73.171	Heterocephalus_glaber_male
ENSLOCG00000000106	-	99	70.950	ENSSTOG00000027646	CIRBP	96	62.983	Ictidomys_tridecemlineatus
ENSLOCG00000000106	-	56	68.687	ENSSTOG00000027493	-	53	74.390	Ictidomys_tridecemlineatus
ENSLOCG00000000106	-	99	69.274	ENSJJAG00000013649	Cirbp	96	62.431	Jaculus_jaculus
ENSLOCG00000000106	-	56	68.687	ENSJJAG00000012962	-	53	74.390	Jaculus_jaculus
ENSLOCG00000000106	-	98	53.409	ENSLAFG00000007003	-	53	74.390	Loxodonta_africana
ENSLOCG00000000106	-	97	47.458	ENSLAFG00000029211	-	51	58.537	Loxodonta_africana
ENSLOCG00000000106	-	99	64.804	ENSLAFG00000032156	-	96	61.878	Loxodonta_africana
ENSLOCG00000000106	-	99	71.111	ENSMFAG00000034048	CIRBP	99	63.187	Macaca_fascicularis
ENSLOCG00000000106	-	99	70.000	ENSMMUG00000022101	CIRBP	94	90.000	Macaca_mulatta
ENSLOCG00000000106	-	99	71.111	ENSMNEG00000033116	CIRBP	99	63.187	Macaca_nemestrina
ENSLOCG00000000106	-	99	71.978	ENSMLEG00000038347	CIRBP	99	57.000	Mandrillus_leucophaeus
ENSLOCG00000000106	-	98	54.802	ENSMLEG00000027951	-	98	46.907	Mandrillus_leucophaeus
ENSLOCG00000000106	-	99	72.067	ENSMGAG00000010253	CIRBP	99	57.547	Meleagris_gallopavo
ENSLOCG00000000106	-	98	53.143	ENSMAUG00000016488	-	53	74.390	Mesocricetus_auratus
ENSLOCG00000000106	-	99	69.274	ENSMAUG00000002162	CIRP	99	62.637	Mesocricetus_auratus
ENSLOCG00000000106	-	68	56.911	ENSMICG00000028982	-	83	70.000	Microcebus_murinus
ENSLOCG00000000106	-	78	51.748	ENSMICG00000045835	-	59	60.976	Microcebus_murinus
ENSLOCG00000000106	-	99	71.111	ENSMICG00000038000	CIRBP	96	62.983	Microcebus_murinus
ENSLOCG00000000106	-	99	70.391	ENSMOCG00000012643	Cirbp	99	62.637	Microtus_ochrogaster
ENSLOCG00000000106	-	56	68.687	ENSMOCG00000001511	Rbm3	53	74.390	Microtus_ochrogaster
ENSLOCG00000000106	-	99	60.674	ENSMODG00000005290	CIRBP	78	56.808	Monodelphis_domestica
ENSLOCG00000000106	-	99	69.832	MGP_CAROLIEiJ_G0015568	Cirbp	76	90.244	Mus_caroli
ENSLOCG00000000106	-	52	69.892	MGP_CAROLIEiJ_G0032914	-	80	72.222	Mus_caroli
ENSLOCG00000000106	-	99	69.832	ENSMUSG00000045193	Cirbp	76	90.244	Mus_musculus
ENSLOCG00000000106	-	99	69.274	MGP_PahariEiJ_G0030981	Cirbp	76	90.244	Mus_pahari
ENSLOCG00000000106	-	99	69.832	MGP_SPRETEiJ_G0016386	Cirbp	76	90.244	Mus_spretus
ENSLOCG00000000106	-	81	65.986	ENSMPUG00000008455	-	79	56.667	Mustela_putorius_furo
ENSLOCG00000000106	-	98	53.977	ENSMPUG00000013632	RBM3	53	74.390	Mustela_putorius_furo
ENSLOCG00000000106	-	99	70.391	ENSMLUG00000015007	CIRBP	96	63.536	Myotis_lucifugus
ENSLOCG00000000106	-	98	54.545	ENSNGAG00000012951	Rbm3	53	74.390	Nannospalax_galili
ENSLOCG00000000106	-	53	87.500	ENSNGAG00000001192	Cirbp	99	62.088	Nannospalax_galili
ENSLOCG00000000106	-	99	46.067	ENSNLEG00000031601	-	56	63.415	Nomascus_leucogenys
ENSLOCG00000000106	-	80	72.917	ENSNLEG00000028393	-	57	91.463	Nomascus_leucogenys
ENSLOCG00000000106	-	98	53.977	ENSODEG00000019283	-	52	70.732	Octodon_degus
ENSLOCG00000000106	-	99	69.832	ENSODEG00000012711	-	99	62.088	Octodon_degus
ENSLOCG00000000106	-	95	57.059	ENSODEG00000011721	-	99	50.777	Octodon_degus
ENSLOCG00000000106	-	98	52.571	ENSODEG00000020479	-	52	74.390	Octodon_degus
ENSLOCG00000000106	-	98	49.153	ENSODEG00000019976	-	52	68.293	Octodon_degus
ENSLOCG00000000106	-	80	54.861	ENSOANG00000012483	RBM3	96	51.333	Ornithorhynchus_anatinus
ENSLOCG00000000106	-	98	42.529	ENSOCUG00000027309	-	86	39.474	Oryctolagus_cuniculus
ENSLOCG00000000106	-	99	54.802	ENSOCUG00000002271	RBM3	51	73.171	Oryctolagus_cuniculus
ENSLOCG00000000106	-	98	54.749	ENSOGAG00000026654	RBM3	53	74.390	Otolemur_garnettii
ENSLOCG00000000106	-	99	71.111	ENSOGAG00000029550	CIRBP	96	62.983	Otolemur_garnettii
ENSLOCG00000000106	-	99	69.101	ENSOARG00000011412	CIRBP	87	57.426	Ovis_aries
ENSLOCG00000000106	-	58	56.731	ENSPPAG00000036405	-	71	63.415	Pan_paniscus
ENSLOCG00000000106	-	99	70.000	ENSPPAG00000033562	CIRBP	99	63.187	Pan_paniscus
ENSLOCG00000000106	-	99	70.391	ENSPPRG00000008838	CIRBP	99	62.637	Panthera_pardus
ENSLOCG00000000106	-	54	69.072	ENSPPRG00000013315	RBM3	51	74.390	Panthera_pardus
ENSLOCG00000000106	-	50	58.889	ENSPPRG00000011438	-	66	63.636	Panthera_pardus
ENSLOCG00000000106	-	61	53.211	ENSPTIG00000003747	-	50	59.756	Panthera_tigris_altaica
ENSLOCG00000000106	-	99	70.391	ENSPTIG00000012111	CIRBP	99	62.637	Panthera_tigris_altaica
ENSLOCG00000000106	-	54	69.072	ENSPTIG00000017702	RBM3	51	74.390	Panthera_tigris_altaica
ENSLOCG00000000106	-	58	56.731	ENSPTRG00000044048	-	71	63.415	Pan_troglodytes
ENSLOCG00000000106	-	99	70.000	ENSPTRG00000010192	CIRBP	99	63.187	Pan_troglodytes
ENSLOCG00000000106	-	99	71.111	ENSPANG00000032449	CIRBP	99	63.187	Papio_anubis
ENSLOCG00000000106	-	89	46.316	ENSPANG00000010520	-	55	70.732	Papio_anubis
ENSLOCG00000000106	-	99	64.246	ENSPSIG00000002812	CIRBP	98	59.204	Pelodiscus_sinensis
ENSLOCG00000000106	-	99	69.832	ENSPEMG00000022859	Cirbp	99	62.637	Peromyscus_maniculatus_bairdii
ENSLOCG00000000106	-	98	53.143	ENSPEMG00000012411	Rbm3	53	74.390	Peromyscus_maniculatus_bairdii
ENSLOCG00000000106	-	99	64.045	ENSPCIG00000011223	-	71	62.983	Phascolarctos_cinereus
ENSLOCG00000000106	-	98	60.227	ENSPCIG00000015913	-	90	49.490	Phascolarctos_cinereus
ENSLOCG00000000106	-	72	53.247	ENSPCOG00000013194	-	69	71.233	Propithecus_coquereli
ENSLOCG00000000106	-	99	71.111	ENSPCOG00000028262	CIRBP	99	63.187	Propithecus_coquereli
ENSLOCG00000000106	-	99	69.832	ENSPVAG00000005629	CIRBP	96	63.536	Pteropus_vampyrus
ENSLOCG00000000106	-	98	54.545	ENSPVAG00000015630	RBM3	53	74.390	Pteropus_vampyrus
ENSLOCG00000000106	-	99	69.274	ENSRNOG00000015999	Cirbp	96	62.431	Rattus_norvegicus
ENSLOCG00000000106	-	56	68.687	ENSRNOG00000005387	Rbm3	53	74.390	Rattus_norvegicus
ENSLOCG00000000106	-	99	73.889	ENSRBIG00000031290	CIRBP	98	57.921	Rhinopithecus_bieti
ENSLOCG00000000106	-	81	47.020	ENSRROG00000035651	-	51	57.317	Rhinopithecus_roxellana
ENSLOCG00000000106	-	99	73.889	ENSRROG00000022862	CIRBP	98	57.921	Rhinopithecus_roxellana
ENSLOCG00000000106	-	56	67.677	ENSSBOG00000005354	-	59	73.171	Saimiri_boliviensis_boliviensis
ENSLOCG00000000106	-	99	73.333	ENSSBOG00000021043	CIRBP	99	63.187	Saimiri_boliviensis_boliviensis
ENSLOCG00000000106	-	70	56.800	ENSSBOG00000035691	-	80	62.195	Saimiri_boliviensis_boliviensis
ENSLOCG00000000106	-	99	64.972	ENSSPUG00000006459	CIRBP	96	58.511	Sphenodon_punctatus
ENSLOCG00000000106	-	89	52.356	ENSSPUG00000000444	RBM3	99	53.889	Sphenodon_punctatus
ENSLOCG00000000106	-	98	47.429	ENSSSCG00000030003	-	53	64.634	Sus_scrofa
ENSLOCG00000000106	-	98	48.023	ENSSSCG00000005430	-	51	64.474	Sus_scrofa
ENSLOCG00000000106	-	99	65.730	ENSSSCG00000013427	CIRBP	96	64.088	Sus_scrofa
ENSLOCG00000000106	-	99	65.537	ENSTGUG00000000884	CIRBP	99	59.574	Taeniopygia_guttata
ENSLOCG00000000106	-	98	53.143	ENSTTRG00000008587	RBM3	53	73.171	Tursiops_truncatus
ENSLOCG00000000106	-	99	70.000	ENSTTRG00000011049	CIRBP	98	58.416	Tursiops_truncatus
ENSLOCG00000000106	-	98	54.545	ENSUAMG00000013289	RBM3	53	74.390	Ursus_americanus
ENSLOCG00000000106	-	99	70.950	ENSUAMG00000014659	CIRBP	90	63.736	Ursus_americanus
ENSLOCG00000000106	-	99	70.391	ENSUMAG00000005794	CIRBP	75	63.736	Ursus_maritimus
ENSLOCG00000000106	-	98	54.545	ENSUMAG00000007785	RBM3	53	74.390	Ursus_maritimus
ENSLOCG00000000106	-	99	70.950	ENSVVUG00000022844	-	75	63.536	Vulpes_vulpes
ENSLOCG00000000106	-	98	53.672	ENSVVUG00000017670	RBM3	80	72.222	Vulpes_vulpes
ENSLOCG00000000106	-	99	61.932	ENSXETG00000003281	cirbp	96	58.696	Xenopus_tropicalis