EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000112 (Gene tree)
Gene ID: 102684042
Gene Symbol: -
Alias: -
Full Name: cold-inducible RNA-binding protein B-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 574 bases
Position: chrJH591719.1:20766-21339
Accession: 102684042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000126	RRM_1	PF00076.22	4.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000126	-	363	XM_006643421	ENSLOCP00000000126	121 (aa)	XP_006643484	W5LVG9

Gene Model

Click here to download ENSLOCG00000000112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000112	-	73	82.222	ENSLOCG00000005031	-	58	82.353
ENSLOCG00000000112	-	69	34.722	ENSLOCG00000012575	ELAVL2	56	34.722
ENSLOCG00000000112	-	76	44.872	ENSLOCG00000004675	msi2b	63	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000112	-	71	73.256	ENSG00000102317	RBM3	52	74.390	Homo_sapiens
ENSLOCG00000000112	-	86	85.577	ENSG00000099622	CIRBP	95	91.667	Homo_sapiens
ENSLOCG00000000112	-	82	69.697	ENSAMEG00000012653	RBM3	51	75.610	Ailuropoda_melanoleuca
ENSLOCG00000000112	-	69	75.000	ENSACAG00000013718	-	54	74.390	Anolis_carolinensis
ENSLOCG00000000112	-	66	80.000	ENSACAG00000023931	-	55	80.488	Anolis_carolinensis
ENSLOCG00000000112	-	94	71.930	ENSANAG00000027805	-	56	83.333	Aotus_nancymaae
ENSLOCG00000000112	-	82	59.596	ENSANAG00000028569	-	50	63.415	Aotus_nancymaae
ENSLOCG00000000112	-	82	68.687	ENSANAG00000028883	-	84	68.421	Aotus_nancymaae
ENSLOCG00000000112	-	78	70.213	ENSBTAG00000025848	RBM3	80	69.444	Bos_taurus
ENSLOCG00000000112	-	74	72.222	ENSCJAG00000047341	-	84	68.421	Callithrix_jacchus
ENSLOCG00000000112	-	74	58.889	ENSCJAG00000047359	-	58	59.756	Callithrix_jacchus
ENSLOCG00000000112	-	90	62.727	ENSCAFG00000016002	-	55	73.171	Canis_familiaris
ENSLOCG00000000112	-	82	67.677	ENSCAFG00000015485	RBM3	51	73.171	Canis_familiaris
ENSLOCG00000000112	-	60	69.444	ENSCAFG00020021344	-	80	69.444	Canis_lupus_dingo
ENSLOCG00000000112	-	82	67.677	ENSCAFG00020017705	-	69	73.171	Canis_lupus_dingo
ENSLOCG00000000112	-	74	65.556	ENSCAFG00020020106	-	77	69.136	Canis_lupus_dingo
ENSLOCG00000000112	-	83	68.000	ENSCHIG00000009007	RBM3	58	73.171	Capra_hircus
ENSLOCG00000000112	-	71	63.953	ENSTSYG00000035220	-	59	64.634	Carlito_syrichta
ENSLOCG00000000112	-	83	60.396	ENSTSYG00000035938	-	58	67.073	Carlito_syrichta
ENSLOCG00000000112	-	71	74.419	ENSTSYG00000008670	-	80	72.222	Carlito_syrichta
ENSLOCG00000000112	-	72	59.770	ENSTSYG00000034265	-	55	60.241	Carlito_syrichta
ENSLOCG00000000112	-	94	57.018	ENSTSYG00000031540	-	59	64.634	Carlito_syrichta
ENSLOCG00000000112	-	74	72.222	ENSCAPG00000005923	RBM3	51	74.390	Cavia_aperea
ENSLOCG00000000112	-	74	73.333	ENSCPOG00000003553	RBM3	52	75.610	Cavia_porcellus
ENSLOCG00000000112	-	82	68.687	ENSCCAG00000038019	-	84	68.421	Cebus_capucinus
ENSLOCG00000000112	-	98	53.390	ENSCCAG00000035552	-	55	59.756	Cebus_capucinus
ENSLOCG00000000112	-	71	73.256	ENSCATG00000029986	-	80	70.833	Cercocebus_atys
ENSLOCG00000000112	-	71	72.093	ENSCATG00000038524	-	52	73.171	Cercocebus_atys
ENSLOCG00000000112	-	74	73.333	ENSCLAG00000002908	RBM3	52	75.610	Chinchilla_lanigera
ENSLOCG00000000112	-	71	73.256	ENSCSAG00000013242	RBM3	52	74.390	Chlorocebus_sabaeus
ENSLOCG00000000112	-	71	72.093	ENSCHOG00000007642	RBM3	53	73.171	Choloepus_hoffmanni
ENSLOCG00000000112	-	79	86.316	ENSCPBG00000022930	CIRBP	56	86.316	Chrysemys_picta_bellii
ENSLOCG00000000112	-	66	71.250	ENSCPBG00000021859	RBM3	53	71.951	Chrysemys_picta_bellii
ENSLOCG00000000112	-	66	80.000	ENSCPBG00000021863	-	55	80.488	Chrysemys_picta_bellii
ENSLOCG00000000112	-	71	73.256	ENSCANG00000037907	-	80	70.833	Colobus_angolensis_palliatus
ENSLOCG00000000112	-	96	50.427	ENSCANG00000031890	-	54	53.659	Colobus_angolensis_palliatus
ENSLOCG00000000112	-	79	85.417	ENSCANG00000037000	CIRBP	51	87.805	Colobus_angolensis_palliatus
ENSLOCG00000000112	-	71	73.256	ENSCANG00000014668	-	52	74.390	Colobus_angolensis_palliatus
ENSLOCG00000000112	-	82	69.697	ENSCGRG00001018909	Rbm3	53	75.610	Cricetulus_griseus_chok1gshd
ENSLOCG00000000112	-	82	69.697	ENSCGRG00000014636	Rbm3	53	75.610	Cricetulus_griseus_crigri
ENSLOCG00000000112	-	71	73.256	ENSDNOG00000032565	-	53	74.390	Dasypus_novemcinctus
ENSLOCG00000000112	-	71	73.256	ENSDNOG00000049801	-	51	74.390	Dasypus_novemcinctus
ENSLOCG00000000112	-	99	47.967	ENSDNOG00000043650	-	54	53.012	Dasypus_novemcinctus
ENSLOCG00000000112	-	83	60.000	ENSDNOG00000033435	-	52	63.855	Dasypus_novemcinctus
ENSLOCG00000000112	-	83	61.000	ENSDNOG00000040058	-	51	65.060	Dasypus_novemcinctus
ENSLOCG00000000112	-	69	75.000	ENSDORG00000000182	Rbm3	52	75.610	Dipodomys_ordii
ENSLOCG00000000112	-	98	57.937	ENSEASG00005008251	RBM3	59	63.333	Equus_asinus_asinus
ENSLOCG00000000112	-	78	50.000	ENSEASG00005023389	-	69	53.659	Equus_asinus_asinus
ENSLOCG00000000112	-	98	66.102	ENSECAG00000024257	RBM3	80	72.222	Equus_caballus
ENSLOCG00000000112	-	69	49.398	ENSECAG00000002141	-	92	51.899	Equus_caballus
ENSLOCG00000000112	-	67	69.136	ENSELUG00000004652	-	61	68.675	Esox_lucius
ENSLOCG00000000112	-	55	74.242	ENSFCAG00000030938	-	76	70.000	Felis_catus
ENSLOCG00000000112	-	98	52.941	ENSFCAG00000021952	-	92	57.317	Felis_catus
ENSLOCG00000000112	-	74	73.333	ENSFCAG00000002245	RBM3	51	75.610	Felis_catus
ENSLOCG00000000112	-	75	84.615	ENSFALG00000014000	CIRBP	55	87.805	Ficedula_albicollis
ENSLOCG00000000112	-	74	73.333	ENSFDAG00000007909	RBM3	52	75.610	Fukomys_damarensis
ENSLOCG00000000112	-	66	72.500	ENSGAGG00000016475	RBM3	54	73.171	Gopherus_agassizii
ENSLOCG00000000112	-	66	80.000	ENSGAGG00000016473	-	55	80.488	Gopherus_agassizii
ENSLOCG00000000112	-	80	61.856	ENSGGOG00000025080	-	66	66.667	Gorilla_gorilla
ENSLOCG00000000112	-	71	73.256	ENSGGOG00000005864	RBM3	80	70.833	Gorilla_gorilla
ENSLOCG00000000112	-	87	60.952	ENSHGLG00000013635	-	52	68.293	Heterocephalus_glaber_female
ENSLOCG00000000112	-	69	75.000	ENSHGLG00000006552	RBM3	53	75.610	Heterocephalus_glaber_female
ENSLOCG00000000112	-	95	65.812	ENSHGLG00000010919	-	59	74.390	Heterocephalus_glaber_female
ENSLOCG00000000112	-	95	65.812	ENSHGLG00100014556	-	59	74.390	Heterocephalus_glaber_male
ENSLOCG00000000112	-	69	75.000	ENSHGLG00100017487	-	52	75.610	Heterocephalus_glaber_male
ENSLOCG00000000112	-	87	60.952	ENSHGLG00100015330	-	52	68.293	Heterocephalus_glaber_male
ENSLOCG00000000112	-	69	75.904	ENSIPUG00000007089	RBM3	50	75.904	Ictalurus_punctatus
ENSLOCG00000000112	-	82	69.697	ENSSTOG00000027493	-	53	75.610	Ictidomys_tridecemlineatus
ENSLOCG00000000112	-	82	69.697	ENSJJAG00000012962	-	53	75.610	Jaculus_jaculus
ENSLOCG00000000112	-	70	84.706	ENSLACG00000014490	-	50	84.337	Latimeria_chalumnae
ENSLOCG00000000112	-	98	64.706	ENSLAFG00000007003	-	53	75.610	Loxodonta_africana
ENSLOCG00000000112	-	71	59.302	ENSLAFG00000029211	-	51	59.756	Loxodonta_africana
ENSLOCG00000000112	-	69	72.619	ENSMFAG00000003836	-	61	73.171	Macaca_fascicularis
ENSLOCG00000000112	-	71	73.256	ENSMFAG00000003694	RBM3	80	70.833	Macaca_fascicularis
ENSLOCG00000000112	-	79	85.417	ENSMFAG00000034048	CIRBP	51	87.805	Macaca_fascicularis
ENSLOCG00000000112	-	60	70.833	ENSMMUG00000018349	-	80	70.833	Macaca_mulatta
ENSLOCG00000000112	-	69	72.619	ENSMMUG00000037648	-	52	73.171	Macaca_mulatta
ENSLOCG00000000112	-	79	85.417	ENSMMUG00000022101	CIRBP	94	90.000	Macaca_mulatta
ENSLOCG00000000112	-	71	73.256	ENSMNEG00000042115	-	80	70.833	Macaca_nemestrina
ENSLOCG00000000112	-	69	72.619	ENSMNEG00000000984	-	52	73.171	Macaca_nemestrina
ENSLOCG00000000112	-	90	64.220	ENSMLEG00000027951	-	52	71.951	Mandrillus_leucophaeus
ENSLOCG00000000112	-	71	73.256	ENSMLEG00000041745	-	80	70.833	Mandrillus_leucophaeus
ENSLOCG00000000112	-	82	69.697	ENSMAUG00000016488	-	53	75.610	Mesocricetus_auratus
ENSLOCG00000000112	-	71	70.930	ENSMAUG00000008646	-	62	71.951	Mesocricetus_auratus
ENSLOCG00000000112	-	75	69.565	ENSMICG00000028982	-	83	67.500	Microcebus_murinus
ENSLOCG00000000112	-	92	55.856	ENSMICG00000045835	-	59	60.976	Microcebus_murinus
ENSLOCG00000000112	-	71	74.419	ENSMICG00000047440	-	52	75.610	Microcebus_murinus
ENSLOCG00000000112	-	82	69.697	ENSMOCG00000001511	Rbm3	53	75.610	Microtus_ochrogaster
ENSLOCG00000000112	-	78	70.213	MGP_CAROLIEiJ_G0032914	-	80	72.222	Mus_caroli
ENSLOCG00000000112	-	79	84.375	MGP_CAROLIEiJ_G0015568	Cirbp	76	86.585	Mus_caroli
ENSLOCG00000000112	-	69	75.000	ENSMUSG00000031167	Rbm3	80	72.222	Mus_musculus
ENSLOCG00000000112	-	79	84.375	ENSMUSG00000045193	Cirbp	76	86.585	Mus_musculus
ENSLOCG00000000112	-	79	83.333	MGP_PahariEiJ_G0030981	Cirbp	76	86.585	Mus_pahari
ENSLOCG00000000112	-	69	75.000	MGP_PahariEiJ_G0031463	Rbm3	80	72.222	Mus_pahari
ENSLOCG00000000112	-	79	84.375	MGP_SPRETEiJ_G0016386	Cirbp	76	86.585	Mus_spretus
ENSLOCG00000000112	-	69	75.000	MGP_SPRETEiJ_G0034063	Rbm3	80	72.222	Mus_spretus
ENSLOCG00000000112	-	82	69.697	ENSMPUG00000013632	RBM3	53	75.610	Mustela_putorius_furo
ENSLOCG00000000112	-	69	75.000	ENSMLUG00000003996	RBM3	51	75.610	Myotis_lucifugus
ENSLOCG00000000112	-	82	69.697	ENSNGAG00000012951	Rbm3	53	75.610	Nannospalax_galili
ENSLOCG00000000112	-	84	60.784	ENSNLEG00000031601	-	56	65.060	Nomascus_leucogenys
ENSLOCG00000000112	-	71	73.256	ENSNLEG00000028027	-	80	70.833	Nomascus_leucogenys
ENSLOCG00000000112	-	71	70.930	ENSNLEG00000019350	-	52	71.951	Nomascus_leucogenys
ENSLOCG00000000112	-	79	85.417	ENSNLEG00000028393	-	57	87.805	Nomascus_leucogenys
ENSLOCG00000000112	-	51	77.419	ENSODEG00000009372	-	63	77.419	Octodon_degus
ENSLOCG00000000112	-	71	70.930	ENSODEG00000019234	-	53	71.951	Octodon_degus
ENSLOCG00000000112	-	91	60.909	ENSODEG00000019283	-	52	69.512	Octodon_degus
ENSLOCG00000000112	-	74	73.333	ENSODEG00000020479	-	52	75.610	Octodon_degus
ENSLOCG00000000112	-	69	78.571	ENSODEG00000000843	-	55	78.049	Octodon_degus
ENSLOCG00000000112	-	82	65.000	ENSODEG00000019976	-	52	69.512	Octodon_degus
ENSLOCG00000000112	-	79	86.316	ENSOANG00000012230	CIRBP	55	86.316	Ornithorhynchus_anatinus
ENSLOCG00000000112	-	83	52.000	ENSOCUG00000027309	-	55	55.422	Oryctolagus_cuniculus
ENSLOCG00000000112	-	98	63.866	ENSOCUG00000002271	RBM3	51	74.390	Oryctolagus_cuniculus
ENSLOCG00000000112	-	83	70.000	ENSOGAG00000026654	RBM3	53	75.610	Otolemur_garnettii
ENSLOCG00000000112	-	74	71.111	ENSOARG00000012250	RBM3	50	73.171	Ovis_aries
ENSLOCG00000000112	-	83	60.396	ENSPPAG00000036405	-	69	66.250	Pan_paniscus
ENSLOCG00000000112	-	71	73.256	ENSPPAG00000034179	RBM3	80	70.833	Pan_paniscus
ENSLOCG00000000112	-	74	73.333	ENSPPRG00000013315	RBM3	51	75.610	Panthera_pardus
ENSLOCG00000000112	-	60	68.056	ENSPPRG00000013361	-	80	68.056	Panthera_pardus
ENSLOCG00000000112	-	74	58.242	ENSPPRG00000011438	-	66	63.636	Panthera_pardus
ENSLOCG00000000112	-	74	73.333	ENSPTIG00000017702	RBM3	51	75.610	Panthera_tigris_altaica
ENSLOCG00000000112	-	91	54.054	ENSPTIG00000003747	-	50	59.756	Panthera_tigris_altaica
ENSLOCG00000000112	-	83	60.396	ENSPTRG00000044048	-	69	66.250	Pan_troglodytes
ENSLOCG00000000112	-	71	73.256	ENSPTRG00000021864	RBM3	80	70.833	Pan_troglodytes
ENSLOCG00000000112	-	71	73.256	ENSPANG00000034727	-	80	70.833	Papio_anubis
ENSLOCG00000000112	-	79	68.421	ENSPANG00000010520	-	55	71.951	Papio_anubis
ENSLOCG00000000112	-	71	72.093	ENSPANG00000005561	-	57	73.171	Papio_anubis
ENSLOCG00000000112	-	88	73.585	ENSPKIG00000024430	CIRBP	83	72.277	Paramormyrops_kingsleyae
ENSLOCG00000000112	-	79	86.316	ENSPSIG00000002812	CIRBP	55	86.316	Pelodiscus_sinensis
ENSLOCG00000000112	-	66	71.250	ENSPSIG00000007145	RBM3	51	71.951	Pelodiscus_sinensis
ENSLOCG00000000112	-	82	69.697	ENSPEMG00000012411	Rbm3	53	75.610	Peromyscus_maniculatus_bairdii
ENSLOCG00000000112	-	71	73.256	ENSPPYG00000020314	RBM3	80	70.833	Pongo_abelii
ENSLOCG00000000112	-	70	64.706	ENSPPYG00000000510	-	84	64.634	Pongo_abelii
ENSLOCG00000000112	-	71	73.256	ENSPCOG00000014346	-	52	74.390	Propithecus_coquereli
ENSLOCG00000000112	-	83	68.000	ENSPCOG00000013194	-	69	72.603	Propithecus_coquereli
ENSLOCG00000000112	-	67	72.840	ENSPCOG00000017170	-	90	71.429	Propithecus_coquereli
ENSLOCG00000000112	-	82	69.697	ENSPVAG00000015630	RBM3	53	75.610	Pteropus_vampyrus
ENSLOCG00000000112	-	82	69.697	ENSRNOG00000005387	Rbm3	53	75.610	Rattus_norvegicus
ENSLOCG00000000112	-	79	85.417	ENSRBIG00000031290	CIRBP	51	87.805	Rhinopithecus_bieti
ENSLOCG00000000112	-	71	73.256	ENSRBIG00000040498	RBM3	80	70.833	Rhinopithecus_bieti
ENSLOCG00000000112	-	79	85.417	ENSRROG00000022862	CIRBP	51	87.805	Rhinopithecus_roxellana
ENSLOCG00000000112	-	71	73.256	ENSRROG00000034767	RBM3	80	70.833	Rhinopithecus_roxellana
ENSLOCG00000000112	-	83	53.465	ENSRROG00000035651	-	51	56.098	Rhinopithecus_roxellana
ENSLOCG00000000112	-	82	68.687	ENSSBOG00000005354	-	59	74.390	Saimiri_boliviensis_boliviensis
ENSLOCG00000000112	-	64	69.231	ENSSBOG00000020829	-	93	69.231	Saimiri_boliviensis_boliviensis
ENSLOCG00000000112	-	98	58.475	ENSSBOG00000035691	-	80	63.415	Saimiri_boliviensis_boliviensis
ENSLOCG00000000112	-	55	80.303	ENSSPUG00000000450	-	81	80.303	Sphenodon_punctatus
ENSLOCG00000000112	-	79	84.211	ENSSPUG00000006459	CIRBP	55	84.211	Sphenodon_punctatus
ENSLOCG00000000112	-	68	73.171	ENSSPUG00000000444	RBM3	55	73.171	Sphenodon_punctatus
ENSLOCG00000000112	-	98	51.261	ENSSSCG00000005430	-	51	65.789	Sus_scrofa
ENSLOCG00000000112	-	71	73.256	ENSSSCG00000021591	-	80	70.833	Sus_scrofa
ENSLOCG00000000112	-	79	86.316	ENSSSCG00000013427	CIRBP	55	86.316	Sus_scrofa
ENSLOCG00000000112	-	71	65.116	ENSSSCG00000030003	-	53	65.854	Sus_scrofa
ENSLOCG00000000112	-	79	86.316	ENSTGUG00000000884	CIRBP	57	86.316	Taeniopygia_guttata
ENSLOCG00000000112	-	82	68.687	ENSTTRG00000008587	RBM3	53	74.390	Tursiops_truncatus
ENSLOCG00000000112	-	82	69.697	ENSUAMG00000013289	RBM3	53	75.610	Ursus_americanus
ENSLOCG00000000112	-	82	69.697	ENSUMAG00000007785	RBM3	53	75.610	Ursus_maritimus
ENSLOCG00000000112	-	82	69.697	ENSVVUG00000017670	RBM3	80	72.222	Vulpes_vulpes
ENSLOCG00000000112	-	66	70.000	ENSVVUG00000006737	-	92	70.000	Vulpes_vulpes