EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000179 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 16848 bases
Position: chrJH591754.1:528-17375
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000200	RVT_1	PF00078.27	4.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000200	-	1971	-	ENSLOCP00000000200	657 (aa)	-	W5LVP3

Gene Model

Click here to download ENSLOCG00000000179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000179	-	100	38.679	ENSLOCG00000008433	-	91	38.679
ENSLOCG00000000179	-	66	30.023	ENSLOCG00000000597	-	98	30.023
ENSLOCG00000000179	-	100	35.435	ENSLOCG00000013905	-	88	35.435
ENSLOCG00000000179	-	51	45.238	ENSLOCG00000018030	-	94	45.238
ENSLOCG00000000179	-	99	43.028	ENSLOCG00000000437	-	78	43.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000179	-	99	35.410	ENSACLG00000015899	-	88	35.410	Astatotilapia_calliptera
ENSLOCG00000000179	-	53	40.115	ENSACLG00000011312	-	51	40.115	Astatotilapia_calliptera
ENSLOCG00000000179	-	58	35.492	ENSACLG00000011319	-	100	35.492	Astatotilapia_calliptera
ENSLOCG00000000179	-	55	30.601	ENSAMXG00000035718	-	69	30.601	Astyanax_mexicanus
ENSLOCG00000000179	-	59	32.746	ENSELUG00000002589	-	82	32.746	Esox_lucius
ENSLOCG00000000179	-	55	35.342	ENSGAGG00000013921	-	98	35.342	Gopherus_agassizii
ENSLOCG00000000179	-	61	37.469	ENSHBUG00000020853	-	53	37.469	Haplochromis_burtoni
ENSLOCG00000000179	-	54	34.270	ENSHBUG00000011715	-	90	34.270	Haplochromis_burtoni
ENSLOCG00000000179	-	65	33.645	ENSMZEG00005025877	-	99	33.645	Maylandia_zebra
ENSLOCG00000000179	-	65	33.645	ENSMZEG00005008304	-	99	33.645	Maylandia_zebra
ENSLOCG00000000179	-	55	30.028	ENSNBRG00000022130	-	86	30.028	Neolamprologus_brichardi
ENSLOCG00000000179	-	100	34.384	ENSONIG00000021275	-	89	34.384	Oreochromis_niloticus
ENSLOCG00000000179	-	50	31.065	ENSORLG00000023713	-	84	31.065	Oryzias_latipes
ENSLOCG00000000179	-	60	33.580	ENSPLAG00000015080	-	95	33.580	Poecilia_latipinna
ENSLOCG00000000179	-	58	33.594	ENSPREG00000004933	-	96	33.594	Poecilia_reticulata
ENSLOCG00000000179	-	62	32.282	ENSPREG00000010319	-	99	32.282	Poecilia_reticulata
ENSLOCG00000000179	-	62	30.120	ENSSDUG00000015364	-	87	30.120	Seriola_dumerili
ENSLOCG00000000179	-	63	32.854	ENSXMAG00000023211	-	92	32.854	Xiphophorus_maculatus