EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6870 bases
Position: chrJH591530.1:50794-57663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000323	zf-CCHC	PF00098.23	1.1e-18	1	2
ENSLOCP00000000323	zf-CCHC	PF00098.23	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000323	-	906	-	ENSLOCP00000000323	302 (aa)	-	W5LW16

Gene Model

Click here to download ENSLOCG00000000297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000297	-	86	48.252	ENSLOCG00000017501	-	87	48.252
ENSLOCG00000000297	-	88	70.000	ENSLOCG00000017327	-	100	70.000
ENSLOCG00000000297	-	93	54.717	ENSLOCG00000017328	-	93	54.717
ENSLOCG00000000297	-	84	60.714	ENSLOCG00000017824	-	100	60.714
ENSLOCG00000000297	-	95	56.604	ENSLOCG00000017670	-	88	56.604
ENSLOCG00000000297	-	96	52.147	ENSLOCG00000018075	-	83	52.147
ENSLOCG00000000297	-	99	46.875	ENSLOCG00000010606	-	100	46.875
ENSLOCG00000000297	-	94	46.643	ENSLOCG00000000361	-	99	46.643
ENSLOCG00000000297	-	88	57.241	ENSLOCG00000017623	-	58	57.241
ENSLOCG00000000297	-	99	40.604	ENSLOCG00000008338	-	98	40.604
ENSLOCG00000000297	-	87	44.898	ENSLOCG00000017694	-	84	44.898
ENSLOCG00000000297	-	94	55.901	ENSLOCG00000017303	-	85	55.901
ENSLOCG00000000297	-	93	69.672	ENSLOCG00000017302	-	92	69.672
ENSLOCG00000000297	-	94	60.959	ENSLOCG00000017305	-	100	60.959
ENSLOCG00000000297	-	89	46.753	ENSLOCG00000006695	-	89	46.753
ENSLOCG00000000297	-	92	54.717	ENSLOCG00000017503	-	88	54.717
ENSLOCG00000000297	-	90	58.442	ENSLOCG00000017974	-	81	57.233
ENSLOCG00000000297	-	93	58.197	ENSLOCG00000018355	-	93	58.197
ENSLOCG00000000297	-	93	54.545	ENSLOCG00000017641	-	100	54.545
ENSLOCG00000000297	-	87	47.973	ENSLOCG00000017867	-	86	47.973
ENSLOCG00000000297	-	92	53.047	ENSLOCG00000000632	-	90	53.047
ENSLOCG00000000297	-	95	58.228	ENSLOCG00000017639	-	87	58.228
ENSLOCG00000000297	-	94	49.315	ENSLOCG00000002624	-	82	49.315
ENSLOCG00000000297	-	97	53.383	ENSLOCG00000000320	-	94	53.383
ENSLOCG00000000297	-	59	65.217	ENSLOCG00000017666	-	90	65.217
ENSLOCG00000000297	-	95	63.763	ENSLOCG00000012680	-	99	63.763
ENSLOCG00000000297	-	90	53.548	ENSLOCG00000017530	-	90	53.548
ENSLOCG00000000297	-	91	50.362	ENSLOCG00000000602	-	100	50.362

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000297	-	86	33.103	ENSATEG00000004599	-	63	37.241	Anabas_testudineus
ENSLOCG00000000297	-	94	42.073	ENSACLG00000011316	-	78	42.073	Astatotilapia_calliptera
ENSLOCG00000000297	-	84	43.262	ENSACLG00000019919	-	89	43.262	Astatotilapia_calliptera
ENSLOCG00000000297	-	96	37.288	ENSACLG00000019767	-	58	37.288	Astatotilapia_calliptera
ENSLOCG00000000297	-	95	38.655	ENSACLG00000019815	-	59	38.655	Astatotilapia_calliptera
ENSLOCG00000000297	-	94	42.073	ENSACLG00000015881	-	80	42.073	Astatotilapia_calliptera
ENSLOCG00000000297	-	94	42.073	ENSACLG00000014014	-	77	42.073	Astatotilapia_calliptera
ENSLOCG00000000297	-	94	30.625	ENSAMXG00000035711	-	79	30.625	Astyanax_mexicanus
ENSLOCG00000000297	-	90	38.411	ENSCAFG00000025206	ZCCHC3	53	38.411	Canis_familiaris
ENSLOCG00000000297	-	90	38.411	ENSCANG00000010812	ZCCHC3	54	38.411	Colobus_angolensis_palliatus
ENSLOCG00000000297	-	91	35.503	ENSELUG00000002602	-	88	35.503	Esox_lucius
ENSLOCG00000000297	-	94	42.077	ENSGACG00000018075	-	100	42.077	Gasterosteus_aculeatus
ENSLOCG00000000297	-	95	41.398	ENSGACG00000000773	-	99	41.398	Gasterosteus_aculeatus
ENSLOCG00000000297	-	89	32.117	ENSHBUG00000005879	-	54	30.667	Haplochromis_burtoni
ENSLOCG00000000297	-	90	42.208	ENSHBUG00000001589	-	79	42.208	Haplochromis_burtoni
ENSLOCG00000000297	-	92	35.758	ENSHBUG00000011697	-	74	35.758	Haplochromis_burtoni
ENSLOCG00000000297	-	70	42.063	ENSIPUG00000013198	-	58	42.063	Ictalurus_punctatus
ENSLOCG00000000297	-	87	37.748	ENSLAFG00000030593	ZCCHC3	54	37.748	Loxodonta_africana
ENSLOCG00000000297	-	94	42.073	ENSMZEG00005028553	-	79	42.073	Maylandia_zebra
ENSLOCG00000000297	-	96	38.136	ENSMZEG00005028125	-	56	37.815	Maylandia_zebra
ENSLOCG00000000297	-	93	42.073	ENSMZEG00005028130	-	77	42.073	Maylandia_zebra
ENSLOCG00000000297	-	95	38.983	ENSMZEG00005025868	-	58	38.983	Maylandia_zebra
ENSLOCG00000000297	-	95	38.983	ENSMZEG00005025869	-	58	38.983	Maylandia_zebra
ENSLOCG00000000297	-	77	45.652	ENSMZEG00005025873	-	77	45.312	Maylandia_zebra
ENSLOCG00000000297	-	81	45.312	ENSMZEG00005028547	-	96	45.312	Maylandia_zebra
ENSLOCG00000000297	-	95	38.983	ENSMZEG00005025871	-	58	38.983	Maylandia_zebra
ENSLOCG00000000297	-	90	32.639	ENSNBRG00000022137	-	75	31.210	Neolamprologus_brichardi
ENSLOCG00000000297	-	93	39.326	ENSNBRG00000024091	-	50	39.326	Neolamprologus_brichardi
ENSLOCG00000000297	-	92	41.250	ENSNBRG00000024092	-	80	41.250	Neolamprologus_brichardi
ENSLOCG00000000297	-	87	38.411	ENSPPAG00000010453	-	56	38.411	Pan_paniscus
ENSLOCG00000000297	-	82	40.288	ENSPTIG00000009393	ZCCHC3	60	40.288	Panthera_tigris_altaica
ENSLOCG00000000297	-	96	41.525	ENSPKIG00000015947	-	74	41.525	Paramormyrops_kingsleyae
ENSLOCG00000000297	-	50	55.000	ENSPKIG00000015924	-	60	55.000	Paramormyrops_kingsleyae
ENSLOCG00000000297	-	93	31.707	ENSPNYG00000002656	-	91	32.164	Pundamilia_nyererei
ENSLOCG00000000297	-	79	38.931	ENSPNAG00000007153	-	74	38.931	Pygocentrus_nattereri
ENSLOCG00000000297	-	53	45.902	ENSPNAG00000002955	-	71	45.902	Pygocentrus_nattereri
ENSLOCG00000000297	-	89	41.611	ENSPNAG00000004865	-	77	41.611	Pygocentrus_nattereri
ENSLOCG00000000297	-	96	35.955	ENSSFOG00015012405	-	90	35.955	Scleropages_formosus
ENSLOCG00000000297	-	88	35.333	ENSSFOG00015017573	-	76	35.333	Scleropages_formosus
ENSLOCG00000000297	-	88	40.000	ENSSFOG00015015819	-	70	41.353	Scleropages_formosus
ENSLOCG00000000297	-	90	38.411	ENSVPAG00000011267	-	60	38.411	Vicugna_pacos
ENSLOCG00000000297	-	91	33.974	ENSXETG00000034120	-	80	33.974	Xenopus_tropicalis
ENSLOCG00000000297	-	88	35.043	ENSXETG00000032297	-	87	35.043	Xenopus_tropicalis
ENSLOCG00000000297	-	100	35.897	ENSXETG00000030090	-	99	35.897	Xenopus_tropicalis
ENSLOCG00000000297	-	92	34.746	ENSXETG00000031282	-	87	35.043	Xenopus_tropicalis
ENSLOCG00000000297	-	90	36.129	ENSXETG00000033641	-	94	36.129	Xenopus_tropicalis
ENSLOCG00000000297	-	89	42.767	ENSXETG00000034305	-	97	42.767	Xenopus_tropicalis
ENSLOCG00000000297	-	100	32.270	ENSXETG00000032242	-	100	32.270	Xenopus_tropicalis
ENSLOCG00000000297	-	90	34.746	ENSXETG00000032402	-	87	35.043	Xenopus_tropicalis
ENSLOCG00000000297	-	91	33.974	ENSXETG00000033566	-	80	33.974	Xenopus_tropicalis
ENSLOCG00000000297	-	93	30.435	ENSXETG00000033143	-	88	30.435	Xenopus_tropicalis
ENSLOCG00000000297	-	88	34.694	ENSXETG00000030911	-	76	34.694	Xenopus_tropicalis
ENSLOCG00000000297	-	91	33.974	ENSXETG00000033553	-	80	33.974	Xenopus_tropicalis
ENSLOCG00000000297	-	91	33.333	ENSXETG00000034004	-	80	33.333	Xenopus_tropicalis
ENSLOCG00000000297	-	90	33.898	ENSXETG00000031539	-	79	33.898	Xenopus_tropicalis
ENSLOCG00000000297	-	92	36.667	ENSXETG00000030161	-	96	36.667	Xenopus_tropicalis
ENSLOCG00000000297	-	92	32.852	ENSXETG00000033341	-	99	32.852	Xenopus_tropicalis
ENSLOCG00000000297	-	91	33.974	ENSXETG00000033661	-	80	33.974	Xenopus_tropicalis