EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000320 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 9826 bases
Position: chrJH591500.1:7725-17550
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000346	zf-CCHC	PF00098.23	7.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000346	-	948	-	ENSLOCP00000000346	316 (aa)	-	W5LW39

Gene Model

Click here to download ENSLOCG00000000320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000320	-	86	41.304	ENSLOCG00000010606	-	100	41.304
ENSLOCG00000000320	-	81	52.212	ENSLOCG00000017327	-	100	52.212
ENSLOCG00000000320	-	93	51.145	ENSLOCG00000017328	-	98	51.145
ENSLOCG00000000320	-	77	52.174	ENSLOCG00000002624	-	78	52.174
ENSLOCG00000000320	-	84	47.200	ENSLOCG00000017641	-	100	47.200
ENSLOCG00000000320	-	94	53.383	ENSLOCG00000000297	-	97	53.383
ENSLOCG00000000320	-	93	56.154	ENSLOCG00000017974	-	87	56.154
ENSLOCG00000000320	-	80	46.847	ENSLOCG00000017305	-	100	46.847
ENSLOCG00000000320	-	86	43.966	ENSLOCG00000017694	-	92	43.966
ENSLOCG00000000320	-	93	53.846	ENSLOCG00000018355	-	98	53.846
ENSLOCG00000000320	-	94	49.704	ENSLOCG00000018075	-	86	49.704
ENSLOCG00000000320	-	91	41.353	ENSLOCG00000017501	-	98	41.353
ENSLOCG00000000320	-	93	68.702	ENSLOCG00000017503	-	93	68.702
ENSLOCG00000000320	-	85	46.014	ENSLOCG00000000602	-	100	46.014
ENSLOCG00000000320	-	77	48.113	ENSLOCG00000017824	-	100	48.113
ENSLOCG00000000320	-	95	59.398	ENSLOCG00000017670	-	95	59.398
ENSLOCG00000000320	-	93	53.906	ENSLOCG00000017530	-	99	53.906
ENSLOCG00000000320	-	89	42.500	ENSLOCG00000000361	-	99	42.500
ENSLOCG00000000320	-	92	46.154	ENSLOCG00000000632	-	96	46.154
ENSLOCG00000000320	-	95	54.545	ENSLOCG00000012680	-	99	54.545
ENSLOCG00000000320	-	93	54.962	ENSLOCG00000017302	-	97	54.962
ENSLOCG00000000320	-	91	53.030	ENSLOCG00000017623	-	75	53.030
ENSLOCG00000000320	-	92	46.552	ENSLOCG00000008338	-	97	46.552
ENSLOCG00000000320	-	87	43.396	ENSLOCG00000006695	-	99	43.396
ENSLOCG00000000320	-	94	55.639	ENSLOCG00000017303	-	89	55.639
ENSLOCG00000000320	-	94	58.647	ENSLOCG00000017639	-	93	58.647
ENSLOCG00000000320	-	91	47.368	ENSLOCG00000017867	-	92	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000320	-	87	34.848	ENSATEG00000004599	-	67	36.641	Anabas_testudineus
ENSLOCG00000000320	-	75	42.202	ENSACLG00000019919	-	84	42.202	Astatotilapia_calliptera
ENSLOCG00000000320	-	97	41.538	ENSACLG00000015881	-	88	41.538	Astatotilapia_calliptera
ENSLOCG00000000320	-	97	41.538	ENSACLG00000011316	-	85	41.538	Astatotilapia_calliptera
ENSLOCG00000000320	-	97	41.538	ENSACLG00000014014	-	83	41.538	Astatotilapia_calliptera
ENSLOCG00000000320	-	87	32.759	ENSAMXG00000037658	-	62	32.759	Astyanax_mexicanus
ENSLOCG00000000320	-	90	38.525	ENSAMXG00000033087	-	51	38.525	Astyanax_mexicanus
ENSLOCG00000000320	-	89	34.615	ENSCAFG00000025206	ZCCHC3	55	34.615	Canis_familiaris
ENSLOCG00000000320	-	89	34.615	ENSCANG00000010812	ZCCHC3	55	34.615	Colobus_angolensis_palliatus
ENSLOCG00000000320	-	92	36.994	ENSELUG00000017799	-	53	36.994	Esox_lucius
ENSLOCG00000000320	-	87	36.538	ENSELUG00000002602	-	81	36.538	Esox_lucius
ENSLOCG00000000320	-	93	40.152	ENSGACG00000018075	-	99	40.152	Gasterosteus_aculeatus
ENSLOCG00000000320	-	94	40.152	ENSGACG00000000773	-	98	40.152	Gasterosteus_aculeatus
ENSLOCG00000000320	-	80	33.121	ENSHBUG00000011697	-	67	33.121	Haplochromis_burtoni
ENSLOCG00000000320	-	95	40.602	ENSHBUG00000001589	-	88	40.602	Haplochromis_burtoni
ENSLOCG00000000320	-	65	43.902	ENSIPUG00000013198	-	58	43.902	Ictalurus_punctatus
ENSLOCG00000000320	-	89	33.846	ENSLAFG00000030593	ZCCHC3	56	33.846	Loxodonta_africana
ENSLOCG00000000320	-	97	40.602	ENSMZEG00005028130	-	83	40.602	Maylandia_zebra
ENSLOCG00000000320	-	98	43.077	ENSMZEG00005024527	-	57	43.077	Maylandia_zebra
ENSLOCG00000000320	-	75	40.777	ENSMZEG00005025873	-	77	43.077	Maylandia_zebra
ENSLOCG00000000320	-	97	41.538	ENSMZEG00005028553	-	85	41.538	Maylandia_zebra
ENSLOCG00000000320	-	79	44.037	ENSMZEG00005028547	-	69	44.037	Maylandia_zebra
ENSLOCG00000000320	-	89	39.231	ENSNBRG00000024092	-	78	39.231	Neolamprologus_brichardi
ENSLOCG00000000320	-	89	34.615	ENSOARG00000019161	ZCCHC3	53	34.615	Ovis_aries
ENSLOCG00000000320	-	89	34.615	ENSPPAG00000010453	-	58	34.615	Pan_paniscus
ENSLOCG00000000320	-	72	37.405	ENSPTIG00000009393	ZCCHC3	57	37.405	Panthera_tigris_altaica
ENSLOCG00000000320	-	91	39.370	ENSPKIG00000015947	-	74	39.370	Paramormyrops_kingsleyae
ENSLOCG00000000320	-	84	31.618	ENSPNYG00000002656	-	86	31.618	Pundamilia_nyererei
ENSLOCG00000000320	-	63	43.750	ENSPNAG00000007153	-	63	43.750	Pygocentrus_nattereri
ENSLOCG00000000320	-	91	37.121	ENSPNAG00000004865	-	84	37.121	Pygocentrus_nattereri
ENSLOCG00000000320	-	52	48.214	ENSPNAG00000002955	-	85	48.214	Pygocentrus_nattereri
ENSLOCG00000000320	-	81	40.351	ENSSFOG00015012405	-	79	40.351	Scleropages_formosus
ENSLOCG00000000320	-	91	36.719	ENSSFOG00015017573	-	92	36.719	Scleropages_formosus
ENSLOCG00000000320	-	86	39.130	ENSSFOG00015015819	-	72	42.553	Scleropages_formosus
ENSLOCG00000000320	-	59	35.897	ENSSFOG00015016511	-	64	42.593	Scleropages_formosus
ENSLOCG00000000320	-	89	33.846	ENSVPAG00000011267	-	62	33.846	Vicugna_pacos
ENSLOCG00000000320	-	85	35.766	ENSXETG00000033641	-	90	35.766	Xenopus_tropicalis
ENSLOCG00000000320	-	94	32.544	ENSXETG00000033566	-	88	32.544	Xenopus_tropicalis
ENSLOCG00000000320	-	94	32.544	ENSXETG00000034120	-	88	32.544	Xenopus_tropicalis
ENSLOCG00000000320	-	87	32.258	ENSXETG00000030911	-	80	32.258	Xenopus_tropicalis
ENSLOCG00000000320	-	87	30.894	ENSXETG00000032402	-	87	30.709	Xenopus_tropicalis
ENSLOCG00000000320	-	98	37.594	ENSXETG00000030090	-	92	37.594	Xenopus_tropicalis
ENSLOCG00000000320	-	98	32.061	ENSXETG00000033143	-	99	32.061	Xenopus_tropicalis
ENSLOCG00000000320	-	73	37.755	ENSXETG00000034305	-	86	37.755	Xenopus_tropicalis
ENSLOCG00000000320	-	94	32.544	ENSXETG00000033661	-	88	32.544	Xenopus_tropicalis
ENSLOCG00000000320	-	92	35.043	ENSXETG00000030161	-	93	35.043	Xenopus_tropicalis
ENSLOCG00000000320	-	90	31.447	ENSXETG00000031539	-	82	31.447	Xenopus_tropicalis
ENSLOCG00000000320	-	85	32.773	ENSXETG00000032242	-	100	32.773	Xenopus_tropicalis
ENSLOCG00000000320	-	86	30.709	ENSXETG00000032297	-	87	30.709	Xenopus_tropicalis
ENSLOCG00000000320	-	94	31.953	ENSXETG00000034004	-	88	31.953	Xenopus_tropicalis
ENSLOCG00000000320	-	88	30.894	ENSXETG00000031282	-	87	30.709	Xenopus_tropicalis
ENSLOCG00000000320	-	92	32.800	ENSXETG00000033553	-	86	32.800	Xenopus_tropicalis