EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000361 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 16755 bases
Position: chrJH591500.1:65537-82291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000396	zf-CCHC	PF00098.23	5.4e-17	1	2
ENSLOCP00000000396	zf-CCHC	PF00098.23	5.4e-17	2	2
ENSLOCP00000000435	zf-CCHC	PF00098.23	5.9e-11	1	2
ENSLOCP00000000435	zf-CCHC	PF00098.23	5.9e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000435	-	519	-	ENSLOCP00000000435	173 (aa)	-	W5LWC8
ENSLOCT00000000396	-	846	-	ENSLOCP00000000396	282 (aa)	-	W5LW89

Gene Model

Click here to download ENSLOCG00000000361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000361	-	95	48.322	ENSLOCG00000017503	-	83	48.322
ENSLOCG00000000361	-	93	44.444	ENSLOCG00000017501	-	95	42.038
ENSLOCG00000000361	-	95	57.718	ENSLOCG00000017302	-	86	57.718
ENSLOCG00000000361	-	94	45.217	ENSLOCG00000017694	-	92	42.500
ENSLOCG00000000361	-	99	45.675	ENSLOCG00000012680	-	99	45.675
ENSLOCG00000000361	-	86	84.733	ENSLOCG00000008338	-	93	84.733
ENSLOCG00000000361	-	89	81.159	ENSLOCG00000017824	-	99	81.159
ENSLOCG00000000361	-	97	45.763	ENSLOCG00000010606	-	99	45.763
ENSLOCG00000000361	-	90	52.482	ENSLOCG00000017641	-	99	52.482
ENSLOCG00000000361	-	98	44.628	ENSLOCG00000000632	-	96	44.628
ENSLOCG00000000361	-	96	48.993	ENSLOCG00000017670	-	82	48.993
ENSLOCG00000000361	-	93	88.028	ENSLOCG00000017305	-	99	88.028
ENSLOCG00000000361	-	96	48.993	ENSLOCG00000017303	-	79	48.993
ENSLOCG00000000361	-	95	42.857	ENSLOCG00000017530	-	91	41.667
ENSLOCG00000000361	-	99	42.500	ENSLOCG00000000320	-	89	42.500
ENSLOCG00000000361	-	92	48.201	ENSLOCG00000017623	-	56	48.201
ENSLOCG00000000361	-	93	45.890	ENSLOCG00000017974	-	80	42.038
ENSLOCG00000000361	-	94	44.371	ENSLOCG00000002624	-	85	44.371
ENSLOCG00000000361	-	96	43.443	ENSLOCG00000006695	-	91	39.873
ENSLOCG00000000361	-	100	43.373	ENSLOCG00000017328	-	97	43.373
ENSLOCG00000000361	-	94	58.333	ENSLOCG00000017327	-	99	58.333
ENSLOCG00000000361	-	96	59.732	ENSLOCG00000018355	-	87	59.732
ENSLOCG00000000361	-	91	41.026	ENSLOCG00000017867	-	93	36.025
ENSLOCG00000000361	-	96	39.706	ENSLOCG00000000602	-	99	39.706
ENSLOCG00000000361	-	96	49.664	ENSLOCG00000017639	-	82	49.664
ENSLOCG00000000361	-	99	46.643	ENSLOCG00000000297	-	94	46.643
ENSLOCG00000000361	-	97	47.651	ENSLOCG00000018075	-	76	47.651
ENSLOCG00000000361	-	54	61.364	ENSLOCG00000017666	-	86	61.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000361	-	94	37.705	ENSAMEG00000013999	ZCCHC3	50	34.177	Ailuropoda_melanoleuca
ENSLOCG00000000361	-	90	43.103	ENSATEG00000004599	-	61	43.103	Anabas_testudineus
ENSLOCG00000000361	-	100	52.941	ENSACLG00000015881	-	78	52.941	Astatotilapia_calliptera
ENSLOCG00000000361	-	95	52.941	ENSACLG00000014014	-	69	52.941	Astatotilapia_calliptera
ENSLOCG00000000361	-	90	52.212	ENSACLG00000019919	-	89	52.212	Astatotilapia_calliptera
ENSLOCG00000000361	-	95	52.941	ENSACLG00000011316	-	70	52.941	Astatotilapia_calliptera
ENSLOCG00000000361	-	91	32.857	ENSAMXG00000035711	-	69	32.857	Astyanax_mexicanus
ENSLOCG00000000361	-	94	37.705	ENSCAFG00000025206	ZCCHC3	55	34.177	Canis_familiaris
ENSLOCG00000000361	-	94	37.705	ENSCANG00000010812	ZCCHC3	56	34.177	Colobus_angolensis_palliatus
ENSLOCG00000000361	-	88	38.532	ENSELUG00000002602	-	78	35.333	Esox_lucius
ENSLOCG00000000361	-	93	49.573	ENSGACG00000018075	-	94	45.912	Gasterosteus_aculeatus
ENSLOCG00000000361	-	98	44.706	ENSGACG00000000773	-	98	44.706	Gasterosteus_aculeatus
ENSLOCG00000000361	-	90	40.171	ENSHBUG00000011697	-	61	40.171	Haplochromis_burtoni
ENSLOCG00000000361	-	84	35.878	ENSHBUG00000005879	-	55	32.026	Haplochromis_burtoni
ENSLOCG00000000361	-	95	51.261	ENSHBUG00000001589	-	76	51.261	Haplochromis_burtoni
ENSLOCG00000000361	-	74	41.228	ENSIPUG00000013198	-	58	41.228	Ictalurus_punctatus
ENSLOCG00000000361	-	94	38.525	ENSLAFG00000030593	ZCCHC3	57	34.810	Loxodonta_africana
ENSLOCG00000000361	-	100	52.941	ENSMZEG00005008237	-	51	52.941	Maylandia_zebra
ENSLOCG00000000361	-	77	48.485	ENSMZEG00005025873	-	88	48.485	Maylandia_zebra
ENSLOCG00000000361	-	100	52.941	ENSMZEG00005028130	-	79	52.941	Maylandia_zebra
ENSLOCG00000000361	-	85	52.174	ENSMZEG00005028547	-	96	52.174	Maylandia_zebra
ENSLOCG00000000361	-	95	52.941	ENSMZEG00005028553	-	71	52.941	Maylandia_zebra
ENSLOCG00000000361	-	95	50.420	ENSNBRG00000024092	-	74	50.420	Neolamprologus_brichardi
ENSLOCG00000000361	-	83	33.858	ENSNBRG00000022137	-	67	32.836	Neolamprologus_brichardi
ENSLOCG00000000361	-	100	50.820	ENSNBRG00000024091	-	51	50.820	Neolamprologus_brichardi
ENSLOCG00000000361	-	94	37.705	ENSOARG00000019161	ZCCHC3	50	34.459	Ovis_aries
ENSLOCG00000000361	-	94	37.705	ENSPPAG00000010453	-	53	37.705	Pan_paniscus
ENSLOCG00000000361	-	90	40.541	ENSPTIG00000009393	ZCCHC3	62	40.541	Panthera_tigris_altaica
ENSLOCG00000000361	-	52	57.627	ENSPKIG00000015924	-	58	57.627	Paramormyrops_kingsleyae
ENSLOCG00000000361	-	94	51.695	ENSPKIG00000015947	-	71	47.500	Paramormyrops_kingsleyae
ENSLOCG00000000361	-	95	31.579	ENSPNYG00000002656	-	81	32.639	Pundamilia_nyererei
ENSLOCG00000000361	-	93	44.915	ENSPNAG00000004865	-	75	44.915	Pygocentrus_nattereri
ENSLOCG00000000361	-	82	31.200	ENSPNAG00000010555	-	69	31.200	Pygocentrus_nattereri
ENSLOCG00000000361	-	71	49.412	ENSPNAG00000007153	-	60	49.412	Pygocentrus_nattereri
ENSLOCG00000000361	-	52	50.847	ENSPNAG00000002955	-	62	50.847	Pygocentrus_nattereri
ENSLOCG00000000361	-	93	50.427	ENSSFOG00015015819	-	65	52.041	Scleropages_formosus
ENSLOCG00000000361	-	93	50.847	ENSSFOG00015012405	-	78	50.847	Scleropages_formosus
ENSLOCG00000000361	-	100	44.915	ENSSFOG00015017573	-	83	44.915	Scleropages_formosus
ENSLOCG00000000361	-	70	46.429	ENSSFOG00015016511	-	66	57.377	Scleropages_formosus
ENSLOCG00000000361	-	94	36.885	ENSVPAG00000011267	-	63	33.544	Vicugna_pacos
ENSLOCG00000000361	-	93	34.783	ENSXETG00000032297	-	81	34.783	Xenopus_tropicalis
ENSLOCG00000000361	-	91	44.915	ENSXETG00000034305	-	91	44.915	Xenopus_tropicalis
ENSLOCG00000000361	-	90	37.931	ENSXETG00000033566	-	81	33.758	Xenopus_tropicalis
ENSLOCG00000000361	-	98	33.213	ENSXETG00000032242	-	99	33.213	Xenopus_tropicalis
ENSLOCG00000000361	-	96	30.545	ENSXETG00000033341	-	97	30.545	Xenopus_tropicalis
ENSLOCG00000000361	-	90	34.188	ENSXETG00000031539	-	71	34.188	Xenopus_tropicalis
ENSLOCG00000000361	-	96	32.759	ENSXETG00000033143	-	91	32.759	Xenopus_tropicalis
ENSLOCG00000000361	-	91	34.783	ENSXETG00000031282	-	81	34.783	Xenopus_tropicalis
ENSLOCG00000000361	-	91	34.783	ENSXETG00000032402	-	81	34.783	Xenopus_tropicalis
ENSLOCG00000000361	-	94	38.462	ENSXETG00000030090	-	76	38.462	Xenopus_tropicalis
ENSLOCG00000000361	-	98	35.000	ENSXETG00000030161	-	96	35.000	Xenopus_tropicalis
ENSLOCG00000000361	-	90	37.931	ENSXETG00000033661	-	81	33.758	Xenopus_tropicalis
ENSLOCG00000000361	-	84	39.316	ENSXETG00000033641	-	91	37.838	Xenopus_tropicalis
ENSLOCG00000000361	-	90	37.931	ENSXETG00000034120	-	81	33.758	Xenopus_tropicalis
ENSLOCG00000000361	-	90	37.931	ENSXETG00000033553	-	81	33.758	Xenopus_tropicalis
ENSLOCG00000000361	-	93	37.069	ENSXETG00000030911	-	81	33.121	Xenopus_tropicalis
ENSLOCG00000000361	-	90	37.069	ENSXETG00000034004	-	81	33.121	Xenopus_tropicalis