EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000000418 (Gene tree)
Gene ID: 102683899
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 15414 bases
Position: chrJH591430.1:505861-521274
Accession: 102683899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000458	TRM13	PF05206.14	1.4e-86	1	1
ENSLOCP00000000458	zf-U11-48K	PF05253.12	1.8e-10	1	1
ENSLOCP00000000458	zf-TRM13_CCCH	PF11722.8	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000458	-	2828	XM_006643089	ENSLOCP00000000458	463 (aa)	XP_006643152	W5LWF1

Gene Model

Click here to download ENSLOCG00000000418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000418	trmt13	97	58.952	ENSG00000122435	TRMT13	96	59.712	Homo_sapiens
ENSLOCG00000000418	trmt13	97	52.323	ENSAPOG00000015131	trmt13	99	52.323	Acanthochromis_polyacanthus
ENSLOCG00000000418	trmt13	97	58.478	ENSAMEG00000008917	TRMT13	95	58.297	Ailuropoda_melanoleuca
ENSLOCG00000000418	trmt13	100	55.000	ENSACIG00000005804	trmt13	96	54.158	Amphilophus_citrinellus
ENSLOCG00000000418	trmt13	97	52.632	ENSAOCG00000023585	trmt13	99	52.632	Amphiprion_ocellaris
ENSLOCG00000000418	trmt13	97	52.621	ENSAPEG00000004025	trmt13	99	52.227	Amphiprion_percula
ENSLOCG00000000418	trmt13	98	55.319	ENSATEG00000006597	trmt13	97	55.319	Anabas_testudineus
ENSLOCG00000000418	trmt13	90	59.859	ENSAPLG00000014924	TRMT13	99	59.390	Anas_platyrhynchos
ENSLOCG00000000418	trmt13	97	57.792	ENSACAG00000003498	TRMT13	98	57.792	Anolis_carolinensis
ENSLOCG00000000418	trmt13	97	59.130	ENSANAG00000019525	TRMT13	86	69.149	Aotus_nancymaae
ENSLOCG00000000418	trmt13	98	55.844	ENSACLG00000020018	trmt13	99	55.844	Astatotilapia_calliptera
ENSLOCG00000000418	trmt13	99	60.632	ENSAMXG00000017963	trmt13	100	60.677	Astyanax_mexicanus
ENSLOCG00000000418	trmt13	97	58.190	ENSBTAG00000015781	TRMT13	96	57.792	Bos_taurus
ENSLOCG00000000418	trmt13	97	58.952	ENSCJAG00000000200	TRMT13	89	77.863	Callithrix_jacchus
ENSLOCG00000000418	trmt13	64	56.352	ENSCAFG00000020021	TRMT13	96	56.352	Canis_familiaris
ENSLOCG00000000418	trmt13	56	67.181	ENSCAFG00020011572	TRMT13	90	67.181	Canis_lupus_dingo
ENSLOCG00000000418	trmt13	97	59.052	ENSCHIG00000015395	TRMT13	96	58.658	Capra_hircus
ENSLOCG00000000418	trmt13	97	58.531	ENSTSYG00000010811	TRMT13	96	65.979	Carlito_syrichta
ENSLOCG00000000418	trmt13	72	47.674	ENSCAPG00000009085	TRMT13	95	48.266	Cavia_aperea
ENSLOCG00000000418	trmt13	98	58.785	ENSCPOG00000000694	TRMT13	96	58.747	Cavia_porcellus
ENSLOCG00000000418	trmt13	97	59.130	ENSCCAG00000023772	TRMT13	86	68.085	Cebus_capucinus
ENSLOCG00000000418	trmt13	99	57.692	ENSCATG00000033556	TRMT13	95	63.462	Cercocebus_atys
ENSLOCG00000000418	trmt13	88	58.173	ENSCLAG00000008220	TRMT13	98	58.950	Chinchilla_lanigera
ENSLOCG00000000418	trmt13	99	57.906	ENSCSAG00000001506	TRMT13	97	57.479	Chlorocebus_sabaeus
ENSLOCG00000000418	trmt13	98	59.091	ENSCPBG00000026671	TRMT13	97	59.091	Chrysemys_picta_bellii
ENSLOCG00000000418	trmt13	99	57.906	ENSCANG00000034659	TRMT13	95	64.423	Colobus_angolensis_palliatus
ENSLOCG00000000418	trmt13	97	59.740	ENSCGRG00001021601	Trmt13	95	59.698	Cricetulus_griseus_chok1gshd
ENSLOCG00000000418	trmt13	51	54.000	ENSCGRG00000000093	-	96	53.968	Cricetulus_griseus_crigri
ENSLOCG00000000418	trmt13	99	52.484	ENSCSEG00000000591	trmt13	99	52.484	Cynoglossus_semilaevis
ENSLOCG00000000418	trmt13	97	52.211	ENSCVAG00000017342	trmt13	94	52.421	Cyprinodon_variegatus
ENSLOCG00000000418	trmt13	99	62.766	ENSDARG00000102846	trmt13	99	62.179	Danio_rerio
ENSLOCG00000000418	trmt13	56	66.920	ENSDNOG00000001710	TRMT13	80	66.920	Dasypus_novemcinctus
ENSLOCG00000000418	trmt13	97	58.134	ENSDORG00000015808	Trmt13	95	57.516	Dipodomys_ordii
ENSLOCG00000000418	trmt13	97	35.974	FBgn0037435	CG18048	94	35.332	Drosophila_melanogaster
ENSLOCG00000000418	trmt13	97	50.647	ENSETEG00000005819	TRMT13	96	50.644	Echinops_telfairi
ENSLOCG00000000418	trmt13	96	47.335	ENSEBUG00000014444	trmt13	97	47.122	Eptatretus_burgeri
ENSLOCG00000000418	trmt13	97	58.297	ENSEASG00005015918	TRMT13	95	57.860	Equus_asinus_asinus
ENSLOCG00000000418	trmt13	97	58.079	ENSECAG00000022626	TRMT13	95	57.642	Equus_caballus
ENSLOCG00000000418	trmt13	76	61.111	ENSEEUG00000000294	TRMT13	73	61.111	Erinaceus_europaeus
ENSLOCG00000000418	trmt13	99	61.458	ENSELUG00000003803	trmt13	100	61.311	Esox_lucius
ENSLOCG00000000418	trmt13	97	59.130	ENSFCAG00000030618	TRMT13	96	58.273	Felis_catus
ENSLOCG00000000418	trmt13	96	60.310	ENSFALG00000002424	TRMT13	95	60.089	Ficedula_albicollis
ENSLOCG00000000418	trmt13	99	57.537	ENSFDAG00000006342	TRMT13	97	57.505	Fukomys_damarensis
ENSLOCG00000000418	trmt13	80	56.091	ENSFHEG00000022954	trmt13	100	55.854	Fundulus_heteroclitus
ENSLOCG00000000418	trmt13	96	52.809	ENSGMOG00000013223	trmt13	100	52.550	Gadus_morhua
ENSLOCG00000000418	trmt13	96	58.980	ENSGALG00000005290	TRMT13	98	59.101	Gallus_gallus
ENSLOCG00000000418	trmt13	81	53.608	ENSGAFG00000001577	trmt13	86	53.093	Gambusia_affinis
ENSLOCG00000000418	trmt13	99	55.724	ENSGACG00000013428	trmt13	99	55.724	Gasterosteus_aculeatus
ENSLOCG00000000418	trmt13	98	58.747	ENSGAGG00000023303	TRMT13	96	67.547	Gopherus_agassizii
ENSLOCG00000000418	trmt13	97	59.389	ENSGGOG00000005616	TRMT13	86	69.149	Gorilla_gorilla
ENSLOCG00000000418	trmt13	98	56.129	ENSHBUG00000007754	trmt13	99	56.129	Haplochromis_burtoni
ENSLOCG00000000418	trmt13	97	59.524	ENSHGLG00000002164	TRMT13	95	59.524	Heterocephalus_glaber_female
ENSLOCG00000000418	trmt13	97	59.524	ENSHGLG00100001618	TRMT13	95	59.524	Heterocephalus_glaber_male
ENSLOCG00000000418	trmt13	96	50.885	ENSHCOG00000020553	trmt13	96	50.554	Hippocampus_comes
ENSLOCG00000000418	trmt13	99	61.957	ENSIPUG00000024787	trmt13	99	61.790	Ictalurus_punctatus
ENSLOCG00000000418	trmt13	97	58.388	ENSSTOG00000013483	TRMT13	96	57.952	Ictidomys_tridecemlineatus
ENSLOCG00000000418	trmt13	97	57.609	ENSJJAG00000018012	Trmt13	97	57.359	Jaculus_jaculus
ENSLOCG00000000418	trmt13	63	54.915	ENSKMAG00000007639	trmt13	92	54.915	Kryptolebias_marmoratus
ENSLOCG00000000418	trmt13	97	54.008	ENSLBEG00000020238	trmt13	99	53.814	Labrus_bergylta
ENSLOCG00000000418	trmt13	99	59.442	ENSLACG00000013153	TRMT13	99	59.227	Latimeria_chalumnae
ENSLOCG00000000418	trmt13	77	54.987	ENSLAFG00000002383	TRMT13	99	54.987	Loxodonta_africana
ENSLOCG00000000418	trmt13	99	57.906	ENSMFAG00000034681	TRMT13	95	64.423	Macaca_fascicularis
ENSLOCG00000000418	trmt13	99	57.906	ENSMMUG00000004243	TRMT13	95	64.423	Macaca_mulatta
ENSLOCG00000000418	trmt13	99	57.906	ENSMNEG00000036102	TRMT13	95	64.423	Macaca_nemestrina
ENSLOCG00000000418	trmt13	99	57.692	ENSMLEG00000034258	TRMT13	95	63.462	Mandrillus_leucophaeus
ENSLOCG00000000418	trmt13	96	56.332	ENSMAMG00000016597	trmt13	96	56.332	Mastacembelus_armatus
ENSLOCG00000000418	trmt13	98	55.628	ENSMZEG00005020959	trmt13	99	55.628	Maylandia_zebra
ENSLOCG00000000418	trmt13	90	60.757	ENSMGAG00000006970	TRMT13	99	60.757	Meleagris_gallopavo
ENSLOCG00000000418	trmt13	98	59.013	ENSMAUG00000010448	Trmt13	96	58.798	Mesocricetus_auratus
ENSLOCG00000000418	trmt13	97	59.170	ENSMICG00000005283	TRMT13	96	58.993	Microcebus_murinus
ENSLOCG00000000418	trmt13	98	59.179	ENSMOCG00000019914	Trmt13	96	58.099	Microtus_ochrogaster
ENSLOCG00000000418	trmt13	56	52.060	ENSMMOG00000007762	trmt13	90	52.060	Mola_mola
ENSLOCG00000000418	trmt13	97	58.710	ENSMODG00000003646	TRMT13	96	58.710	Monodelphis_domestica
ENSLOCG00000000418	trmt13	97	54.222	ENSMALG00000020965	trmt13	97	54.222	Monopterus_albus
ENSLOCG00000000418	trmt13	98	59.091	MGP_CAROLIEiJ_G0025568	Trmt13	98	63.068	Mus_caroli
ENSLOCG00000000418	trmt13	97	59.653	ENSMUSG00000033439	Trmt13	98	64.205	Mus_musculus
ENSLOCG00000000418	trmt13	97	58.913	MGP_PahariEiJ_G0027014	Trmt13	98	61.932	Mus_pahari
ENSLOCG00000000418	trmt13	98	59.698	MGP_SPRETEiJ_G0026518	Trmt13	98	64.205	Mus_spretus
ENSLOCG00000000418	trmt13	78	56.522	ENSMPUG00000002078	-	97	56.250	Mustela_putorius_furo
ENSLOCG00000000418	trmt13	97	56.371	ENSMLUG00000002124	TRMT13	96	55.965	Myotis_lucifugus
ENSLOCG00000000418	trmt13	98	51.828	ENSNBRG00000006783	trmt13	98	51.828	Neolamprologus_brichardi
ENSLOCG00000000418	trmt13	97	58.952	ENSNLEG00000035917	TRMT13	86	69.149	Nomascus_leucogenys
ENSLOCG00000000418	trmt13	51	57.627	ENSMEUG00000013346	-	95	57.627	Notamacropus_eugenii
ENSLOCG00000000418	trmt13	64	67.568	ENSOPRG00000012048	TRMT13	62	67.568	Ochotona_princeps
ENSLOCG00000000418	trmt13	98	56.559	ENSONIG00000004574	trmt13	99	56.559	Oreochromis_niloticus
ENSLOCG00000000418	trmt13	90	57.611	ENSOANG00000012057	TRMT13	98	57.611	Ornithorhynchus_anatinus
ENSLOCG00000000418	trmt13	97	58.643	ENSOCUG00000023095	TRMT13	95	58.643	Oryctolagus_cuniculus
ENSLOCG00000000418	trmt13	97	51.304	ENSORLG00000003320	trmt13	98	51.836	Oryzias_latipes
ENSLOCG00000000418	trmt13	97	51.641	ENSORLG00020005972	trmt13	97	51.641	Oryzias_latipes_hni
ENSLOCG00000000418	trmt13	97	54.902	ENSORLG00015002270	trmt13	98	54.902	Oryzias_latipes_hsok
ENSLOCG00000000418	trmt13	97	54.386	ENSOMEG00000006724	trmt13	94	55.044	Oryzias_melastigma
ENSLOCG00000000418	trmt13	97	58.009	ENSOGAG00000005618	TRMT13	93	57.576	Otolemur_garnettii
ENSLOCG00000000418	trmt13	97	59.052	ENSOARG00000017983	TRMT13	96	58.658	Ovis_aries
ENSLOCG00000000418	trmt13	97	58.515	ENSPPAG00000043736	TRMT13	86	69.149	Pan_paniscus
ENSLOCG00000000418	trmt13	97	59.783	ENSPPRG00000003424	TRMT13	95	59.348	Panthera_pardus
ENSLOCG00000000418	trmt13	97	59.783	ENSPTIG00000018598	TRMT13	95	59.348	Panthera_tigris_altaica
ENSLOCG00000000418	trmt13	97	58.734	ENSPTRG00000001001	TRMT13	86	69.149	Pan_troglodytes
ENSLOCG00000000418	trmt13	99	57.906	ENSPANG00000007598	TRMT13	95	64.423	Papio_anubis
ENSLOCG00000000418	trmt13	98	63.297	ENSPKIG00000001514	trmt13	99	62.907	Paramormyrops_kingsleyae
ENSLOCG00000000418	trmt13	87	56.867	ENSPSIG00000012703	TRMT13	99	56.867	Pelodiscus_sinensis
ENSLOCG00000000418	trmt13	97	54.486	ENSPMGG00000013298	trmt13	93	54.486	Periophthalmus_magnuspinnatus
ENSLOCG00000000418	trmt13	97	60.087	ENSPEMG00000000275	Trmt13	95	59.002	Peromyscus_maniculatus_bairdii
ENSLOCG00000000418	trmt13	97	46.921	ENSPMAG00000000823	trmt13	98	47.246	Petromyzon_marinus
ENSLOCG00000000418	trmt13	97	56.531	ENSPCIG00000007699	TRMT13	96	57.328	Phascolarctos_cinereus
ENSLOCG00000000418	trmt13	97	53.675	ENSPFOG00000008675	trmt13	95	53.333	Poecilia_formosa
ENSLOCG00000000418	trmt13	97	53.145	ENSPLAG00000009709	trmt13	99	52.814	Poecilia_latipinna
ENSLOCG00000000418	trmt13	97	52.609	ENSPMEG00000022954	trmt13	99	51.957	Poecilia_mexicana
ENSLOCG00000000418	trmt13	77	56.522	ENSPREG00000005645	trmt13	92	54.448	Poecilia_reticulata
ENSLOCG00000000418	trmt13	96	58.901	ENSPPYG00000001120	TRMT13	95	58.462	Pongo_abelii
ENSLOCG00000000418	trmt13	97	58.824	ENSPCAG00000002340	TRMT13	95	58.785	Procavia_capensis
ENSLOCG00000000418	trmt13	97	57.424	ENSPCOG00000017984	TRMT13	86	67.021	Propithecus_coquereli
ENSLOCG00000000418	trmt13	97	58.734	ENSPVAG00000017430	TRMT13	95	58.297	Pteropus_vampyrus
ENSLOCG00000000418	trmt13	98	54.409	ENSPNYG00000013690	trmt13	99	54.409	Pundamilia_nyererei
ENSLOCG00000000418	trmt13	99	62.017	ENSPNAG00000022130	trmt13	100	61.588	Pygocentrus_nattereri
ENSLOCG00000000418	trmt13	97	59.395	ENSRNOG00000015140	Trmt13	93	58.621	Rattus_norvegicus
ENSLOCG00000000418	trmt13	99	57.906	ENSRBIG00000037686	TRMT13	95	64.423	Rhinopithecus_bieti
ENSLOCG00000000418	trmt13	99	57.906	ENSRROG00000044057	TRMT13	95	64.423	Rhinopithecus_roxellana
ENSLOCG00000000418	trmt13	97	59.389	ENSSBOG00000026541	TRMT13	86	69.149	Saimiri_boliviensis_boliviensis
ENSLOCG00000000418	trmt13	91	58.372	ENSSHAG00000005213	TRMT13	96	58.372	Sarcophilus_harrisii
ENSLOCG00000000418	trmt13	99	60.823	ENSSFOG00015017560	trmt13	99	60.954	Scleropages_formosus
ENSLOCG00000000418	trmt13	98	53.390	ENSSMAG00000014592	trmt13	97	52.754	Scophthalmus_maximus
ENSLOCG00000000418	trmt13	99	54.167	ENSSDUG00000015508	trmt13	97	53.958	Seriola_dumerili
ENSLOCG00000000418	trmt13	99	54.132	ENSSLDG00000019060	trmt13	98	53.512	Seriola_lalandi_dorsalis
ENSLOCG00000000418	trmt13	96	52.851	ENSSARG00000010344	TRMT13	96	52.851	Sorex_araneus
ENSLOCG00000000418	trmt13	95	59.471	ENSSPUG00000016339	TRMT13	98	59.471	Sphenodon_punctatus
ENSLOCG00000000418	trmt13	97	54.604	ENSSPAG00000011922	trmt13	98	54.604	Stegastes_partitus
ENSLOCG00000000418	trmt13	97	58.874	ENSSSCG00000006869	TRMT13	96	58.442	Sus_scrofa
ENSLOCG00000000418	trmt13	97	60.310	ENSTGUG00000005253	TRMT13	98	60.089	Taeniopygia_guttata
ENSLOCG00000000418	trmt13	97	52.941	ENSTRUG00000008400	trmt13	98	52.941	Takifugu_rubripes
ENSLOCG00000000418	trmt13	70	61.392	ENSTBEG00000008911	TRMT13	98	44.608	Tupaia_belangeri
ENSLOCG00000000418	trmt13	50	77.027	ENSTTRG00000015302	-	60	77.027	Tursiops_truncatus
ENSLOCG00000000418	trmt13	97	56.087	ENSUAMG00000017251	TRMT13	95	55.895	Ursus_americanus
ENSLOCG00000000418	trmt13	97	58.043	ENSUMAG00000007901	TRMT13	97	57.109	Ursus_maritimus
ENSLOCG00000000418	trmt13	90	46.353	ENSVPAG00000001034	TRMT13	99	45.882	Vicugna_pacos
ENSLOCG00000000418	trmt13	97	58.079	ENSVVUG00000021996	TRMT13	95	57.642	Vulpes_vulpes
ENSLOCG00000000418	trmt13	97	57.582	ENSXETG00000013204	trmt13	97	57.330	Xenopus_tropicalis
ENSLOCG00000000418	trmt13	97	51.844	ENSXMAG00000010765	trmt13	99	51.844	Xiphophorus_maculatus