EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000437 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 7149 bases
Position: chrJH591500.1:73963-81111
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000483	RVT_1	PF00078.27	3.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000483	-	2469	-	ENSLOCP00000000483	823 (aa)	-	W5LWH6

Gene Model

Click here to download ENSLOCG00000000437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000437	-	78	43.028	ENSLOCG00000000179	-	99	43.028
ENSLOCG00000000437	-	87	34.413	ENSLOCG00000013905	-	99	34.413
ENSLOCG00000000437	-	50	31.279	ENSLOCG00000000597	-	98	31.279
ENSLOCG00000000437	-	88	40.000	ENSLOCG00000008433	-	100	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000437	-	82	35.235	ENSACLG00000015899	-	94	35.235	Astatotilapia_calliptera
ENSLOCG00000000437	-	50	30.290	ENSCVAG00000007707	-	64	30.290	Cyprinodon_variegatus
ENSLOCG00000000437	-	52	35.417	ENSELUG00000002589	-	94	35.417	Esox_lucius
ENSLOCG00000000437	-	78	30.398	ENSGAGG00000010426	-	98	30.398	Gopherus_agassizii
ENSLOCG00000000437	-	56	37.090	ENSHBUG00000020853	-	64	37.090	Haplochromis_burtoni
ENSLOCG00000000437	-	59	30.845	ENSKMAG00000006039	-	53	30.326	Kryptolebias_marmoratus
ENSLOCG00000000437	-	87	36.533	ENSONIG00000021275	-	99	36.533	Oreochromis_niloticus