EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5388 bases
Position: chrJH591549.1:17232-22619
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000563	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000564	-	2406	-	ENSLOCP00000000563	802 (aa)	-	W5LWQ6

Gene Model

Click here to download ENSLOCG00000000511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000511	-	67	78.534	ENSLOCG00000000460	-	86	78.534
ENSLOCG00000000511	-	51	41.667	ENSLOCG00000011715	-	74	41.667
ENSLOCG00000000511	-	50	47.312	ENSLOCG00000000336	-	99	41.224
ENSLOCG00000000511	-	51	45.161	ENSLOCG00000011841	-	90	44.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000511	-	52	38.214	ENSAPOG00000010738	-	67	44.503	Acanthochromis_polyacanthus
ENSLOCG00000000511	-	50	38.577	ENSACIG00000019149	-	72	38.528	Amphilophus_citrinellus
ENSLOCG00000000511	-	58	37.671	ENSACIG00000012159	-	56	37.671	Amphilophus_citrinellus
ENSLOCG00000000511	-	50	39.200	ENSACIG00000016635	-	76	41.827	Amphilophus_citrinellus
ENSLOCG00000000511	-	50	37.066	ENSATEG00000019504	-	75	37.402	Anabas_testudineus
ENSLOCG00000000511	-	51	37.801	ENSACLG00000005659	-	71	42.439	Astatotilapia_calliptera
ENSLOCG00000000511	-	50	39.716	ENSAMXG00000013450	-	57	43.523	Astyanax_mexicanus
ENSLOCG00000000511	-	64	39.583	ENSAMXG00000030159	-	76	40.161	Astyanax_mexicanus
ENSLOCG00000000511	-	50	30.241	ENSAMXG00000036554	-	71	35.149	Astyanax_mexicanus
ENSLOCG00000000511	-	64	41.129	ENSAMXG00000035548	-	52	41.129	Astyanax_mexicanus
ENSLOCG00000000511	-	50	39.286	ENSAMXG00000031962	-	75	41.593	Astyanax_mexicanus
ENSLOCG00000000511	-	50	36.066	ENSCVAG00000014872	-	96	43.011	Cyprinodon_variegatus
ENSLOCG00000000511	-	52	37.589	ENSCVAG00000009387	-	66	43.627	Cyprinodon_variegatus
ENSLOCG00000000511	-	72	32.210	ENSCVAG00000018793	-	60	33.598	Cyprinodon_variegatus
ENSLOCG00000000511	-	53	36.452	ENSCVAG00000000429	-	75	42.500	Cyprinodon_variegatus
ENSLOCG00000000511	-	50	33.014	ENSCVAG00000003593	-	54	33.604	Cyprinodon_variegatus
ENSLOCG00000000511	-	53	38.525	ENSDARG00000087012	BX004816.2	56	38.525	Danio_rerio
ENSLOCG00000000511	-	50	41.781	ENSDARG00000040497	BX004816.1	59	41.975	Danio_rerio
ENSLOCG00000000511	-	50	40.940	ENSDARG00000076573	si:dkey-88j15.3	81	40.667	Danio_rerio
ENSLOCG00000000511	-	56	35.211	ENSDARG00000052876	CR933791.2	64	36.620	Danio_rerio
ENSLOCG00000000511	-	55	40.164	ENSDARG00000063108	CABZ01059392.1	61	41.803	Danio_rerio
ENSLOCG00000000511	-	59	33.634	ENSELUG00000007650	-	69	39.594	Esox_lucius
ENSLOCG00000000511	-	50	38.489	ENSFHEG00000013922	-	59	40.625	Fundulus_heteroclitus
ENSLOCG00000000511	-	55	37.134	ENSGACG00000016194	-	67	40.488	Gasterosteus_aculeatus
ENSLOCG00000000511	-	50	41.600	ENSHBUG00000007182	-	57	42.105	Haplochromis_burtoni
ENSLOCG00000000511	-	50	38.168	ENSHBUG00000003045	-	64	43.814	Haplochromis_burtoni
ENSLOCG00000000511	-	50	38.028	ENSHBUG00000016739	-	59	42.632	Haplochromis_burtoni
ENSLOCG00000000511	-	50	35.606	ENSIPUG00000007173	si:ch1073-185p12.2	54	38.144	Ictalurus_punctatus
ENSLOCG00000000511	-	55	36.458	ENSIPUG00000009955	-	74	36.458	Ictalurus_punctatus
ENSLOCG00000000511	-	53	35.714	ENSKMAG00000000074	-	70	40.000	Kryptolebias_marmoratus
ENSLOCG00000000511	-	54	31.121	ENSKMAG00000010832	-	78	32.055	Kryptolebias_marmoratus
ENSLOCG00000000511	-	50	35.762	ENSKMAG00000003032	-	66	39.706	Kryptolebias_marmoratus
ENSLOCG00000000511	-	54	35.849	ENSLBEG00000017941	-	59	40.686	Labrus_bergylta
ENSLOCG00000000511	-	53	36.134	ENSMAMG00000020006	-	81	36.296	Mastacembelus_armatus
ENSLOCG00000000511	-	54	36.949	ENSMAMG00000012570	-	85	42.029	Mastacembelus_armatus
ENSLOCG00000000511	-	51	38.095	ENSMZEG00005016562	-	81	42.021	Maylandia_zebra
ENSLOCG00000000511	-	50	36.735	ENSMZEG00005021727	-	66	40.816	Maylandia_zebra
ENSLOCG00000000511	-	57	31.461	ENSMZEG00005021247	-	71	35.374	Maylandia_zebra
ENSLOCG00000000511	-	51	35.200	ENSNBRG00000005951	-	56	39.487	Neolamprologus_brichardi
ENSLOCG00000000511	-	52	37.415	ENSNBRG00000004025	-	83	40.385	Neolamprologus_brichardi
ENSLOCG00000000511	-	51	35.540	ENSNBRG00000023111	-	73	38.679	Neolamprologus_brichardi
ENSLOCG00000000511	-	50	39.544	ENSNBRG00000005934	-	64	42.233	Neolamprologus_brichardi
ENSLOCG00000000511	-	52	37.544	ENSONIG00000014258	-	66	41.262	Oreochromis_niloticus
ENSLOCG00000000511	-	51	40.502	ENSONIG00000007408	-	71	42.180	Oreochromis_niloticus
ENSLOCG00000000511	-	50	37.838	ENSONIG00000013605	-	82	40.553	Oreochromis_niloticus
ENSLOCG00000000511	-	50	37.600	ENSONIG00000014260	-	65	38.974	Oreochromis_niloticus
ENSLOCG00000000511	-	50	37.681	ENSONIG00000000240	-	74	43.077	Oreochromis_niloticus
ENSLOCG00000000511	-	50	39.726	ENSORLG00015018526	-	61	40.394	Oryzias_latipes_hsok
ENSLOCG00000000511	-	51	40.157	ENSPMGG00000001433	-	66	40.097	Periophthalmus_magnuspinnatus
ENSLOCG00000000511	-	52	32.511	ENSPFOG00000000263	-	78	33.598	Poecilia_formosa
ENSLOCG00000000511	-	54	37.600	ENSPLAG00000003471	-	53	41.414	Poecilia_latipinna
ENSLOCG00000000511	-	50	39.286	ENSPREG00000016801	-	66	41.860	Poecilia_reticulata
ENSLOCG00000000511	-	51	35.740	ENSPREG00000015263	-	89	41.209	Poecilia_reticulata
ENSLOCG00000000511	-	53	35.714	ENSPNYG00000013308	-	74	35.714	Pundamilia_nyererei
ENSLOCG00000000511	-	51	37.979	ENSPNYG00000004123	-	60	41.148	Pundamilia_nyererei
ENSLOCG00000000511	-	50	37.165	ENSPNYG00000004179	-	64	39.806	Pundamilia_nyererei
ENSLOCG00000000511	-	55	35.762	ENSPNAG00000014658	-	68	39.362	Pygocentrus_nattereri
ENSLOCG00000000511	-	58	34.242	ENSPNAG00000008992	-	59	41.872	Pygocentrus_nattereri
ENSLOCG00000000511	-	57	32.213	ENSPNAG00000026220	-	73	34.644	Pygocentrus_nattereri
ENSLOCG00000000511	-	52	32.176	ENSPNAG00000025944	-	64	32.461	Pygocentrus_nattereri
ENSLOCG00000000511	-	53	32.812	ENSPNAG00000026043	-	50	32.090	Pygocentrus_nattereri
ENSLOCG00000000511	-	53	30.939	ENSPNAG00000025964	-	66	38.462	Pygocentrus_nattereri
ENSLOCG00000000511	-	54	37.338	ENSPNAG00000008987	-	54	41.872	Pygocentrus_nattereri
ENSLOCG00000000511	-	54	32.456	ENSPNAG00000025977	-	70	39.726	Pygocentrus_nattereri
ENSLOCG00000000511	-	73	38.095	ENSSMAG00000012958	-	66	38.095	Scophthalmus_maximus
ENSLOCG00000000511	-	52	37.241	ENSSDUG00000023613	-	64	43.956	Seriola_dumerili
ENSLOCG00000000511	-	50	39.483	ENSSLDG00000001623	-	83	42.381	Seriola_lalandi_dorsalis
ENSLOCG00000000511	-	50	36.885	ENSSLDG00000006746	-	91	38.647	Seriola_lalandi_dorsalis
ENSLOCG00000000511	-	53	34.667	ENSSLDG00000007061	-	78	37.056	Seriola_lalandi_dorsalis
ENSLOCG00000000511	-	50	35.448	ENSSLDG00000006736	-	78	34.940	Seriola_lalandi_dorsalis
ENSLOCG00000000511	-	54	34.471	ENSXCOG00000018338	-	87	41.799	Xiphophorus_couchianus