EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000517 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 1020 bases
Position: chrJH591886.1:246-1265
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000569	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000570	-	912	-	ENSLOCP00000000569	304 (aa)	-	W5LWR2

Gene Model

Click here to download ENSLOCG00000000517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000517	-	59	45.128	ENSLOCG00000011879	-	91	44.615
ENSLOCG00000000517	-	95	51.325	ENSLOCG00000016496	-	89	47.436
ENSLOCG00000000517	-	70	50.000	ENSLOCG00000011098	-	93	55.435
ENSLOCG00000000517	-	76	42.718	ENSLOCG00000011841	-	86	43.602
ENSLOCG00000000517	-	57	60.440	ENSLOCG00000017852	-	69	60.440
ENSLOCG00000000517	-	88	35.231	ENSLOCG00000017850	-	64	38.974
ENSLOCG00000000517	-	59	45.550	ENSLOCG00000017851	-	99	44.845
ENSLOCG00000000517	-	73	45.614	ENSLOCG00000002945	-	65	49.000
ENSLOCG00000000517	-	69	44.144	ENSLOCG00000000272	-	60	45.500
ENSLOCG00000000517	-	67	42.995	ENSLOCG00000000277	-	62	41.951
ENSLOCG00000000517	-	62	37.129	ENSLOCG00000011755	-	73	36.538
ENSLOCG00000000517	-	88	70.909	ENSLOCG00000000082	-	77	79.310
ENSLOCG00000000517	-	65	47.945	ENSLOCG00000000336	-	75	46.154
ENSLOCG00000000517	-	64	44.898	ENSLOCG00000011925	-	95	44.898
ENSLOCG00000000517	-	70	39.344	ENSLOCG00000013437	-	89	38.251
ENSLOCG00000000517	-	59	49.479	ENSLOCG00000018071	-	60	49.738
ENSLOCG00000000517	-	67	78.302	ENSLOCG00000018072	-	84	79.512
ENSLOCG00000000517	-	57	41.398	ENSLOCG00000011913	-	92	41.398
ENSLOCG00000000517	-	60	42.932	ENSLOCG00000000257	-	92	42.784
ENSLOCG00000000517	-	75	43.192	ENSLOCG00000011761	-	76	40.385
ENSLOCG00000000517	-	79	34.524	ENSLOCG00000008631	-	60	36.957
ENSLOCG00000000517	-	93	67.698	ENSLOCG00000000385	-	94	75.000
ENSLOCG00000000517	-	59	39.583	ENSLOCG00000003059	-	89	39.583
ENSLOCG00000000517	-	62	47.674	ENSLOCG00000011883	-	79	47.674
ENSLOCG00000000517	-	88	40.702	ENSLOCG00000011715	-	64	44.388
ENSLOCG00000000517	-	67	42.342	ENSLOCG00000011850	-	72	44.388
ENSLOCG00000000517	-	77	47.423	ENSLOCG00000011853	-	92	47.423
ENSLOCG00000000517	-	68	41.546	ENSLOCG00000011749	-	86	42.268
ENSLOCG00000000517	-	70	39.648	ENSLOCG00000000328	-	81	40.196
ENSLOCG00000000517	-	69	56.682	ENSLOCG00000012075	-	94	58.333
ENSLOCG00000000517	-	56	40.541	ENSLOCG00000011904	-	93	40.426
ENSLOCG00000000517	-	63	42.029	ENSLOCG00000017119	si:dkey-125e8.4	80	41.546

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000517	-	63	43.842	ENSACIG00000007725	-	75	43.842	Amphilophus_citrinellus
ENSLOCG00000000517	-	59	43.684	ENSACIG00000009811	-	80	43.915	Amphilophus_citrinellus
ENSLOCG00000000517	-	54	40.698	ENSACIG00000007737	-	70	40.782	Amphilophus_citrinellus
ENSLOCG00000000517	-	56	41.808	ENSAOCG00000003425	-	67	39.773	Amphiprion_ocellaris
ENSLOCG00000000517	-	95	47.150	ENSAOCG00000004579	-	85	46.316	Amphiprion_ocellaris
ENSLOCG00000000517	-	75	48.108	ENSAPEG00000001491	-	59	47.568	Amphiprion_percula
ENSLOCG00000000517	-	95	47.368	ENSAPEG00000014403	-	66	47.368	Amphiprion_percula
ENSLOCG00000000517	-	94	43.077	ENSATEG00000015654	-	72	43.333	Anabas_testudineus
ENSLOCG00000000517	-	66	38.889	ENSATEG00000023053	-	90	40.291	Anabas_testudineus
ENSLOCG00000000517	-	83	43.038	ENSACLG00000014795	-	70	45.641	Astatotilapia_calliptera
ENSLOCG00000000517	-	73	40.385	ENSAMXG00000006064	-	77	40.385	Astyanax_mexicanus
ENSLOCG00000000517	-	56	41.011	ENSAMXG00000009216	-	87	41.011	Astyanax_mexicanus
ENSLOCG00000000517	-	72	52.880	ENSAMXG00000030744	-	83	51.531	Astyanax_mexicanus
ENSLOCG00000000517	-	77	44.118	ENSAMXG00000019109	-	86	44.118	Astyanax_mexicanus
ENSLOCG00000000517	-	80	36.604	ENSAMXG00000033117	-	84	35.897	Astyanax_mexicanus
ENSLOCG00000000517	-	55	40.642	ENSAMXG00000026085	-	76	39.810	Astyanax_mexicanus
ENSLOCG00000000517	-	74	42.060	ENSCSEG00000021519	-	84	40.782	Cynoglossus_semilaevis
ENSLOCG00000000517	-	88	35.689	ENSCVAG00000005778	-	72	41.951	Cyprinodon_variegatus
ENSLOCG00000000517	-	73	44.304	ENSCVAG00000003054	-	67	47.150	Cyprinodon_variegatus
ENSLOCG00000000517	-	61	43.137	ENSCVAG00000012268	-	66	43.000	Cyprinodon_variegatus
ENSLOCG00000000517	-	65	46.411	ENSDARG00000102683	CR626941.1	75	47.236	Danio_rerio
ENSLOCG00000000517	-	75	49.505	ENSDARG00000063481	si:ch211-214j24.15	60	49.505	Danio_rerio
ENSLOCG00000000517	-	71	43.556	ENSELUG00000003217	-	86	44.608	Esox_lucius
ENSLOCG00000000517	-	61	57.143	ENSELUG00000018192	-	93	56.853	Esox_lucius
ENSLOCG00000000517	-	67	52.968	ENSELUG00000024502	-	69	58.947	Esox_lucius
ENSLOCG00000000517	-	60	44.845	ENSELUG00000018709	-	59	45.361	Esox_lucius
ENSLOCG00000000517	-	68	42.938	ENSFHEG00000020783	-	82	42.938	Fundulus_heteroclitus
ENSLOCG00000000517	-	57	50.270	ENSFHEG00000023334	-	72	50.270	Fundulus_heteroclitus
ENSLOCG00000000517	-	56	46.703	ENSGMOG00000001626	-	100	46.703	Gadus_morhua
ENSLOCG00000000517	-	57	40.000	ENSGAFG00000020826	-	83	40.000	Gambusia_affinis
ENSLOCG00000000517	-	62	41.753	ENSHBUG00000008326	-	90	41.753	Haplochromis_burtoni
ENSLOCG00000000517	-	68	43.182	ENSHBUG00000016284	-	90	45.641	Haplochromis_burtoni
ENSLOCG00000000517	-	92	38.053	ENSHBUG00000001242	-	56	41.627	Haplochromis_burtoni
ENSLOCG00000000517	-	91	36.644	ENSIPUG00000013342	-	63	41.327	Ictalurus_punctatus
ENSLOCG00000000517	-	72	42.857	ENSKMAG00000009600	-	72	44.335	Kryptolebias_marmoratus
ENSLOCG00000000517	-	80	41.732	ENSKMAG00000004774	-	70	46.000	Kryptolebias_marmoratus
ENSLOCG00000000517	-	56	40.789	ENSKMAG00000014764	-	77	40.789	Kryptolebias_marmoratus
ENSLOCG00000000517	-	70	42.105	ENSKMAG00000014605	-	67	45.098	Kryptolebias_marmoratus
ENSLOCG00000000517	-	74	43.515	ENSLBEG00000019652	-	70	46.766	Labrus_bergylta
ENSLOCG00000000517	-	97	47.668	ENSMAMG00000015600	-	70	47.668	Mastacembelus_armatus
ENSLOCG00000000517	-	68	46.047	ENSMAMG00000021969	-	55	46.341	Mastacembelus_armatus
ENSLOCG00000000517	-	70	38.117	ENSMAMG00000021970	-	83	40.526	Mastacembelus_armatus
ENSLOCG00000000517	-	75	33.047	ENSMMOG00000016860	-	58	35.165	Mola_mola
ENSLOCG00000000517	-	58	37.433	ENSMMOG00000016864	-	72	37.566	Mola_mola
ENSLOCG00000000517	-	76	44.082	ENSMMOG00000012876	-	58	51.075	Mola_mola
ENSLOCG00000000517	-	68	43.318	ENSNBRG00000002136	-	66	45.312	Neolamprologus_brichardi
ENSLOCG00000000517	-	77	40.408	ENSORLG00000002537	-	59	46.524	Oryzias_latipes
ENSLOCG00000000517	-	88	41.379	ENSORLG00000002031	-	62	47.343	Oryzias_latipes
ENSLOCG00000000517	-	89	43.320	ENSORLG00020008286	-	79	47.343	Oryzias_latipes_hni
ENSLOCG00000000517	-	88	40.996	ENSORLG00020008323	-	62	46.860	Oryzias_latipes_hni
ENSLOCG00000000517	-	76	41.224	ENSORLG00020011284	-	76	44.041	Oryzias_latipes_hni
ENSLOCG00000000517	-	59	37.368	ENSORLG00020017387	-	86	36.318	Oryzias_latipes_hni
ENSLOCG00000000517	-	77	41.152	ENSORLG00015004110	-	58	46.486	Oryzias_latipes_hsok
ENSLOCG00000000517	-	54	37.931	ENSORLG00015023234	-	91	37.931	Oryzias_latipes_hsok
ENSLOCG00000000517	-	88	41.379	ENSORLG00015004522	-	61	47.343	Oryzias_latipes_hsok
ENSLOCG00000000517	-	76	46.667	ENSOMEG00000010594	-	87	47.594	Oryzias_melastigma
ENSLOCG00000000517	-	74	44.541	ENSOMEG00000020433	-	75	46.535	Oryzias_melastigma
ENSLOCG00000000517	-	60	62.694	ENSPKIG00000017193	-	83	63.021	Paramormyrops_kingsleyae
ENSLOCG00000000517	-	72	54.701	ENSPKIG00000017688	-	68	61.257	Paramormyrops_kingsleyae
ENSLOCG00000000517	-	67	41.553	ENSPMGG00000014055	-	79	43.878	Periophthalmus_magnuspinnatus
ENSLOCG00000000517	-	60	40.000	ENSPMGG00000014056	-	75	40.000	Periophthalmus_magnuspinnatus
ENSLOCG00000000517	-	59	39.000	ENSPMGG00000017993	-	80	40.000	Periophthalmus_magnuspinnatus
ENSLOCG00000000517	-	87	40.417	ENSPFOG00000000191	-	68	45.729	Poecilia_formosa
ENSLOCG00000000517	-	98	41.202	ENSPFOG00000013349	-	75	44.000	Poecilia_formosa
ENSLOCG00000000517	-	74	47.423	ENSPFOG00000015865	-	82	45.641	Poecilia_formosa
ENSLOCG00000000517	-	75	45.641	ENSPFOG00000013109	-	88	45.641	Poecilia_formosa
ENSLOCG00000000517	-	62	39.801	ENSPFOG00000006124	-	86	39.303	Poecilia_formosa
ENSLOCG00000000517	-	83	43.602	ENSPFOG00000016787	-	86	43.602	Poecilia_formosa
ENSLOCG00000000517	-	99	46.231	ENSPFOG00000012732	-	70	46.231	Poecilia_formosa
ENSLOCG00000000517	-	74	44.792	ENSPFOG00000022853	-	88	44.792	Poecilia_formosa
ENSLOCG00000000517	-	93	43.216	ENSPFOG00000015875	-	78	43.434	Poecilia_formosa
ENSLOCG00000000517	-	64	45.000	ENSPFOG00000015871	-	83	45.146	Poecilia_formosa
ENSLOCG00000000517	-	73	39.496	ENSPFOG00000022479	-	82	42.347	Poecilia_formosa
ENSLOCG00000000517	-	61	50.254	ENSPFOG00000005689	si:dkey-185m8.2	70	50.254	Poecilia_formosa
ENSLOCG00000000517	-	65	40.845	ENSPLAG00000018606	-	79	42.512	Poecilia_latipinna
ENSLOCG00000000517	-	71	42.060	ENSPLAG00000003020	-	83	46.231	Poecilia_latipinna
ENSLOCG00000000517	-	69	36.531	ENSPLAG00000018692	-	89	38.462	Poecilia_latipinna
ENSLOCG00000000517	-	91	34.247	ENSPLAG00000018664	-	69	42.781	Poecilia_latipinna
ENSLOCG00000000517	-	56	41.667	ENSPLAG00000018911	-	67	41.111	Poecilia_latipinna
ENSLOCG00000000517	-	73	45.550	ENSPLAG00000020776	-	88	45.550	Poecilia_latipinna
ENSLOCG00000000517	-	95	44.500	ENSPMEG00000005912	-	68	44.221	Poecilia_mexicana
ENSLOCG00000000517	-	54	44.186	ENSPMEG00000010605	-	71	44.186	Poecilia_mexicana
ENSLOCG00000000517	-	83	41.463	ENSPMEG00000000604	-	68	43.590	Poecilia_mexicana
ENSLOCG00000000517	-	93	34.268	ENSPMEG00000000724	-	65	36.402	Poecilia_mexicana
ENSLOCG00000000517	-	67	38.767	ENSPMEG00000020297	-	69	43.005	Poecilia_mexicana
ENSLOCG00000000517	-	56	41.667	ENSPMEG00000018950	-	67	41.667	Poecilia_mexicana
ENSLOCG00000000517	-	79	36.290	ENSPMEG00000006334	-	69	41.885	Poecilia_mexicana
ENSLOCG00000000517	-	74	45.833	ENSPREG00000001530	-	67	45.833	Poecilia_reticulata
ENSLOCG00000000517	-	85	39.316	ENSPREG00000020440	-	68	43.810	Poecilia_reticulata
ENSLOCG00000000517	-	68	39.565	ENSPREG00000001250	-	77	43.590	Poecilia_reticulata
ENSLOCG00000000517	-	73	41.949	ENSPNYG00000010004	-	72	45.411	Pundamilia_nyererei
ENSLOCG00000000517	-	64	39.151	ENSPNAG00000025850	-	75	39.269	Pygocentrus_nattereri
ENSLOCG00000000517	-	73	50.424	ENSPNAG00000002097	-	79	56.345	Pygocentrus_nattereri
ENSLOCG00000000517	-	80	39.370	ENSPNAG00000013132	-	64	46.354	Pygocentrus_nattereri
ENSLOCG00000000517	-	71	38.261	ENSPNAG00000019899	-	83	39.512	Pygocentrus_nattereri
ENSLOCG00000000517	-	75	42.593	ENSPNAG00000014932	-	62	49.180	Pygocentrus_nattereri
ENSLOCG00000000517	-	57	48.045	ENSSFOG00015002420	-	73	46.774	Scleropages_formosus
ENSLOCG00000000517	-	76	39.095	ENSSFOG00015002507	-	75	41.053	Scleropages_formosus
ENSLOCG00000000517	-	70	39.485	ENSSFOG00015002503	-	77	40.976	Scleropages_formosus
ENSLOCG00000000517	-	78	47.312	ENSSMAG00000012187	-	59	47.312	Scophthalmus_maximus
ENSLOCG00000000517	-	73	41.631	ENSSDUG00000022299	-	79	42.718	Seriola_dumerili
ENSLOCG00000000517	-	63	50.588	ENSSLDG00000009168	-	80	50.588	Seriola_lalandi_dorsalis
ENSLOCG00000000517	-	75	42.489	ENSSLDG00000005786	-	60	43.689	Seriola_lalandi_dorsalis
ENSLOCG00000000517	-	71	44.330	ENSSLDG00000010531	-	82	44.330	Seriola_lalandi_dorsalis
ENSLOCG00000000517	-	73	44.255	ENSSPAG00000017616	-	76	45.024	Stegastes_partitus
ENSLOCG00000000517	-	65	44.811	ENSSPAG00000015927	-	75	47.027	Stegastes_partitus
ENSLOCG00000000517	-	67	38.571	ENSTRUG00000020422	-	66	40.741	Takifugu_rubripes
ENSLOCG00000000517	-	68	51.131	ENSTRUG00000018070	-	66	53.646	Takifugu_rubripes
ENSLOCG00000000517	-	72	45.852	ENSTNIG00000004275	-	87	45.366	Tetraodon_nigroviridis
ENSLOCG00000000517	-	70	43.913	ENSTNIG00000004220	-	81	46.970	Tetraodon_nigroviridis
ENSLOCG00000000517	-	59	44.271	ENSXCOG00000018421	-	83	44.271	Xiphophorus_couchianus
ENSLOCG00000000517	-	59	50.521	ENSXCOG00000009005	-	73	50.521	Xiphophorus_couchianus
ENSLOCG00000000517	-	96	39.655	ENSXMAG00000023360	-	73	43.434	Xiphophorus_maculatus