EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3150 bases
Position: chrLG13:7-3156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000587	RVT_1	PF00078.27	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000588	-	1812	-	ENSLOCP00000000587	604 (aa)	-	W5LWT0

Gene Model

Click here to download ENSLOCG00000000531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000531	-	72	35.371	ENSLOCG00000000597	-	97	35.371
ENSLOCG00000000531	-	54	82.799	ENSLOCG00000017441	-	100	82.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000531	-	99	37.398	ENSACLG00000006792	-	50	37.398	Astatotilapia_calliptera
ENSLOCG00000000531	-	98	34.215	ENSAMXG00000030338	-	53	34.215	Astyanax_mexicanus
ENSLOCG00000000531	-	51	40.373	ENSDARG00000086849	si:dkey-187k19.2	56	40.373	Danio_rerio
ENSLOCG00000000531	-	93	30.835	ENSDARG00000114030	CR759843.2	52	30.835	Danio_rerio
ENSLOCG00000000531	-	95	36.348	ENSONIG00000020693	-	69	36.348	Oreochromis_niloticus
ENSLOCG00000000531	-	99	36.554	ENSORLG00000024817	-	65	36.554	Oryzias_latipes
ENSLOCG00000000531	-	98	34.876	ENSORLG00000028372	-	62	35.314	Oryzias_latipes
ENSLOCG00000000531	-	98	39.439	ENSORLG00020016067	-	65	39.439	Oryzias_latipes_hni
ENSLOCG00000000531	-	99	43.372	ENSORLG00020021337	-	60	43.372	Oryzias_latipes_hni
ENSLOCG00000000531	-	98	38.474	ENSORLG00020008765	-	76	38.907	Oryzias_latipes_hni
ENSLOCG00000000531	-	98	39.439	ENSORLG00020013755	-	76	39.439	Oryzias_latipes_hni
ENSLOCG00000000531	-	98	39.274	ENSORLG00020007542	-	72	39.274	Oryzias_latipes_hni
ENSLOCG00000000531	-	98	39.439	ENSORLG00020013618	-	76	39.439	Oryzias_latipes_hni
ENSLOCG00000000531	-	98	37.811	ENSORLG00015021204	-	72	38.245	Oryzias_latipes_hsok
ENSLOCG00000000531	-	99	36.570	ENSORLG00015019437	-	62	36.570	Oryzias_latipes_hsok
ENSLOCG00000000531	-	98	36.782	ENSOMEG00000021029	-	56	36.782	Oryzias_melastigma
ENSLOCG00000000531	-	88	40.364	ENSPKIG00000020531	-	52	40.364	Paramormyrops_kingsleyae
ENSLOCG00000000531	-	54	42.105	ENSPFOG00000023623	-	56	42.105	Poecilia_formosa
ENSLOCG00000000531	-	86	35.701	ENSPFOG00000013154	-	67	35.701	Poecilia_formosa