EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000535 (Gene tree)
Gene ID: 102692317
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5604 bases
Position: chrLG28:8397-14000
Accession: 102692317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000591	Ribosom_S12_S23	PF00164.25	3.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000592	-	1864	XM_006642750	ENSLOCP00000000591	145 (aa)	XP_015194325	W5LWT4

Gene Model

Click here to download ENSLOCG00000000535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000535	si:dkey-17e16.10	55	40.909	ENSLOCG00000013284	rps23	62	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000535	si:dkey-17e16.10	75	81.651	ENSG00000128626	MRPS12	79	81.651	Homo_sapiens
ENSLOCG00000000535	si:dkey-17e16.10	100	71.724	ENSAPOG00000005047	si:dkey-17e16.10	100	71.724	Acanthochromis_polyacanthus
ENSLOCG00000000535	si:dkey-17e16.10	80	78.448	ENSAMEG00000008722	MRPS12	81	80.357	Ailuropoda_melanoleuca
ENSLOCG00000000535	si:dkey-17e16.10	100	72.414	ENSACIG00000016095	si:dkey-17e16.10	100	72.414	Amphilophus_citrinellus
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSAOCG00000018530	si:dkey-17e16.10	100	70.748	Amphiprion_ocellaris
ENSLOCG00000000535	si:dkey-17e16.10	100	69.388	ENSAPEG00000019785	si:dkey-17e16.10	100	69.388	Amphiprion_percula
ENSLOCG00000000535	si:dkey-17e16.10	100	72.414	ENSATEG00000018924	si:dkey-17e16.10	100	72.414	Anabas_testudineus
ENSLOCG00000000535	si:dkey-17e16.10	82	71.429	ENSAPLG00000014350	-	80	71.429	Anas_platyrhynchos
ENSLOCG00000000535	si:dkey-17e16.10	91	74.627	ENSAPLG00000011925	-	98	74.627	Anas_platyrhynchos
ENSLOCG00000000535	si:dkey-17e16.10	80	84.483	ENSACAG00000003829	MRPS12	81	84.483	Anolis_carolinensis
ENSLOCG00000000535	si:dkey-17e16.10	76	80.909	ENSANAG00000033654	MRPS12	79	80.909	Aotus_nancymaae
ENSLOCG00000000535	si:dkey-17e16.10	100	72.109	ENSACLG00000013979	si:dkey-17e16.10	95	72.109	Astatotilapia_calliptera
ENSLOCG00000000535	si:dkey-17e16.10	100	67.808	ENSAMXG00000025945	si:dkey-17e16.10	100	67.808	Astyanax_mexicanus
ENSLOCG00000000535	si:dkey-17e16.10	77	81.250	ENSBTAG00000001782	MRPS12	81	81.250	Bos_taurus
ENSLOCG00000000535	si:dkey-17e16.10	67	59.596	WBGene00011391	mrps-12	63	59.596	Caenorhabditis_elegans
ENSLOCG00000000535	si:dkey-17e16.10	76	80.909	ENSCJAG00000043176	MRPS12	79	80.909	Callithrix_jacchus
ENSLOCG00000000535	si:dkey-17e16.10	92	71.324	ENSCAFG00000005623	MRPS12	83	79.310	Canis_familiaris
ENSLOCG00000000535	si:dkey-17e16.10	92	71.324	ENSCAFG00020016784	MRPS12	83	79.310	Canis_lupus_dingo
ENSLOCG00000000535	si:dkey-17e16.10	78	80.531	ENSCHIG00000013852	MRPS12	81	80.531	Capra_hircus
ENSLOCG00000000535	si:dkey-17e16.10	91	71.852	ENSTSYG00000009568	MRPS12	98	71.852	Carlito_syrichta
ENSLOCG00000000535	si:dkey-17e16.10	86	77.600	ENSCAPG00000009543	MRPS12	92	77.600	Cavia_aperea
ENSLOCG00000000535	si:dkey-17e16.10	92	73.529	ENSCPOG00000035217	MRPS12	98	73.529	Cavia_porcellus
ENSLOCG00000000535	si:dkey-17e16.10	75	79.817	ENSCCAG00000035388	MRPS12	79	79.817	Cebus_capucinus
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSCATG00000038438	MRPS12	79	81.818	Cercocebus_atys
ENSLOCG00000000535	si:dkey-17e16.10	93	73.188	ENSCLAG00000013286	MRPS12	99	73.188	Chinchilla_lanigera
ENSLOCG00000000535	si:dkey-17e16.10	76	83.636	ENSCSAG00000003929	MRPS12	79	83.636	Chlorocebus_sabaeus
ENSLOCG00000000535	si:dkey-17e16.10	59	84.884	ENSCHOG00000008451	MRPS12	62	84.884	Choloepus_hoffmanni
ENSLOCG00000000535	si:dkey-17e16.10	99	68.627	ENSCPBG00000018941	MRPS12	98	68.627	Chrysemys_picta_bellii
ENSLOCG00000000535	si:dkey-17e16.10	68	60.606	ENSCSAVG00000008777	-	52	60.606	Ciona_savignyi
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSCANG00000003652	MRPS12	79	81.818	Colobus_angolensis_palliatus
ENSLOCG00000000535	si:dkey-17e16.10	99	68.750	ENSCGRG00001018968	Mrps12	100	68.750	Cricetulus_griseus_chok1gshd
ENSLOCG00000000535	si:dkey-17e16.10	99	68.750	ENSCGRG00000007113	Mrps12	100	68.750	Cricetulus_griseus_crigri
ENSLOCG00000000535	si:dkey-17e16.10	100	68.276	ENSCSEG00000001174	si:dkey-17e16.10	100	68.276	Cynoglossus_semilaevis
ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	ENSCVAG00000003253	si:dkey-17e16.10	100	71.429	Cyprinodon_variegatus
ENSLOCG00000000535	si:dkey-17e16.10	100	69.388	ENSDARG00000089836	MRPS12	100	69.388	Danio_rerio
ENSLOCG00000000535	si:dkey-17e16.10	82	76.423	ENSDNOG00000003918	MRPS12	88	76.423	Dasypus_novemcinctus
ENSLOCG00000000535	si:dkey-17e16.10	91	72.593	ENSDORG00000001544	Mrps12	97	72.593	Dipodomys_ordii
ENSLOCG00000000535	si:dkey-17e16.10	79	68.696	FBgn0003714	tko	81	68.696	Drosophila_melanogaster
ENSLOCG00000000535	si:dkey-17e16.10	92	72.059	ENSETEG00000017985	MRPS12	98	72.059	Echinops_telfairi
ENSLOCG00000000535	si:dkey-17e16.10	77	82.143	ENSEBUG00000003529	si:dkey-17e16.10	64	82.143	Eptatretus_burgeri
ENSLOCG00000000535	si:dkey-17e16.10	92	72.993	ENSEASG00005019736	MRPS12	98	72.993	Equus_asinus_asinus
ENSLOCG00000000535	si:dkey-17e16.10	92	72.993	ENSECAG00000013794	MRPS12	98	72.993	Equus_caballus
ENSLOCG00000000535	si:dkey-17e16.10	63	60.870	ENSEEUG00000013868	MRPS12	94	60.870	Erinaceus_europaeus
ENSLOCG00000000535	si:dkey-17e16.10	99	72.414	ENSELUG00000014973	si:dkey-17e16.10	99	72.414	Esox_lucius
ENSLOCG00000000535	si:dkey-17e16.10	92	71.324	ENSFCAG00000014573	MRPS12	98	71.324	Felis_catus
ENSLOCG00000000535	si:dkey-17e16.10	75	78.899	ENSFALG00000015276	MRPS12	95	78.899	Ficedula_albicollis
ENSLOCG00000000535	si:dkey-17e16.10	81	78.632	ENSFDAG00000008482	MRPS12	84	78.632	Fukomys_damarensis
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSFHEG00000004575	si:dkey-17e16.10	100	70.748	Fundulus_heteroclitus
ENSLOCG00000000535	si:dkey-17e16.10	76	82.727	ENSGMOG00000020611	si:dkey-17e16.10	99	82.727	Gadus_morhua
ENSLOCG00000000535	si:dkey-17e16.10	99	73.611	ENSGALG00000038667	MRPS12	100	73.611	Gallus_gallus
ENSLOCG00000000535	si:dkey-17e16.10	98	72.917	ENSGAFG00000007521	si:dkey-17e16.10	99	72.917	Gambusia_affinis
ENSLOCG00000000535	si:dkey-17e16.10	77	81.982	ENSGACG00000003011	si:dkey-17e16.10	100	81.982	Gasterosteus_aculeatus
ENSLOCG00000000535	si:dkey-17e16.10	81	81.301	ENSGAGG00000009748	MRPS12	79	81.301	Gopherus_agassizii
ENSLOCG00000000535	si:dkey-17e16.10	75	81.651	ENSGGOG00000002500	MRPS12	79	81.651	Gorilla_gorilla
ENSLOCG00000000535	si:dkey-17e16.10	100	72.109	ENSHBUG00000014480	si:dkey-17e16.10	100	72.109	Haplochromis_burtoni
ENSLOCG00000000535	si:dkey-17e16.10	92	70.803	ENSHGLG00000014942	MRPS12	98	70.803	Heterocephalus_glaber_female
ENSLOCG00000000535	si:dkey-17e16.10	92	70.803	ENSHGLG00100017710	MRPS12	98	70.803	Heterocephalus_glaber_male
ENSLOCG00000000535	si:dkey-17e16.10	100	69.655	ENSHCOG00000010444	si:dkey-17e16.10	96	69.655	Hippocampus_comes
ENSLOCG00000000535	si:dkey-17e16.10	100	73.469	ENSIPUG00000024651	MRPS12	100	73.469	Ictalurus_punctatus
ENSLOCG00000000535	si:dkey-17e16.10	84	78.862	ENSSTOG00000009006	MRPS12	88	78.862	Ictidomys_tridecemlineatus
ENSLOCG00000000535	si:dkey-17e16.10	84	78.226	ENSJJAG00000017837	Mrps12	88	78.226	Jaculus_jaculus
ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	ENSKMAG00000007949	si:dkey-17e16.10	91	71.429	Kryptolebias_marmoratus
ENSLOCG00000000535	si:dkey-17e16.10	83	81.148	ENSLBEG00000001112	si:dkey-17e16.10	86	81.148	Labrus_bergylta
ENSLOCG00000000535	si:dkey-17e16.10	88	80.469	ENSLACG00000018393	MRPS12	80	80.469	Latimeria_chalumnae
ENSLOCG00000000535	si:dkey-17e16.10	84	73.171	ENSLAFG00000022140	MRPS12	88	73.171	Loxodonta_africana
ENSLOCG00000000535	si:dkey-17e16.10	76	80.909	ENSMFAG00000044563	MRPS12	79	80.909	Macaca_fascicularis
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSMNEG00000040379	MRPS12	79	81.818	Macaca_nemestrina
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSMLEG00000036963	MRPS12	79	81.818	Mandrillus_leucophaeus
ENSLOCG00000000535	si:dkey-17e16.10	98	71.528	ENSMAMG00000017962	si:dkey-17e16.10	100	71.528	Mastacembelus_armatus
ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	ENSMZEG00005017336	si:dkey-17e16.10	100	71.429	Maylandia_zebra
ENSLOCG00000000535	si:dkey-17e16.10	86	75.969	ENSMGAG00000005414	MRPS12	80	84.211	Meleagris_gallopavo
ENSLOCG00000000535	si:dkey-17e16.10	52	77.632	ENSMAUG00000019146	Mrps12	74	77.632	Mesocricetus_auratus
ENSLOCG00000000535	si:dkey-17e16.10	77	81.250	ENSMICG00000045111	MRPS12	81	81.250	Microcebus_murinus
ENSLOCG00000000535	si:dkey-17e16.10	79	80.870	ENSMOCG00000012666	Mrps12	86	80.870	Microtus_ochrogaster
ENSLOCG00000000535	si:dkey-17e16.10	77	84.685	ENSMMOG00000010803	si:dkey-17e16.10	77	84.685	Mola_mola
ENSLOCG00000000535	si:dkey-17e16.10	98	67.606	ENSMODG00000013431	MRPS12	97	67.606	Monodelphis_domestica
ENSLOCG00000000535	si:dkey-17e16.10	100	70.068	ENSMALG00000004190	si:dkey-17e16.10	100	70.068	Monopterus_albus
ENSLOCG00000000535	si:dkey-17e16.10	91	75.000	MGP_CAROLIEiJ_G0029457	Mrps12	100	73.810	Mus_caroli
ENSLOCG00000000535	si:dkey-17e16.10	91	75.000	ENSMUSG00000045948	Mrps12	100	73.810	Mus_musculus
ENSLOCG00000000535	si:dkey-17e16.10	80	82.051	MGP_PahariEiJ_G0012691	Mrps12	84	83.962	Mus_pahari
ENSLOCG00000000535	si:dkey-17e16.10	91	75.000	MGP_SPRETEiJ_G0030553	Mrps12	100	73.810	Mus_spretus
ENSLOCG00000000535	si:dkey-17e16.10	77	81.250	ENSMPUG00000017750	MRPS12	84	81.250	Mustela_putorius_furo
ENSLOCG00000000535	si:dkey-17e16.10	77	82.143	ENSMLUG00000006076	MRPS12	81	82.143	Myotis_lucifugus
ENSLOCG00000000535	si:dkey-17e16.10	77	82.143	ENSNGAG00000022099	Mrps12	81	82.143	Nannospalax_galili
ENSLOCG00000000535	si:dkey-17e16.10	100	72.109	ENSNBRG00000007244	si:dkey-17e16.10	100	72.109	Neolamprologus_brichardi
ENSLOCG00000000535	si:dkey-17e16.10	76	75.455	ENSMEUG00000005688	MRPS12	98	75.455	Notamacropus_eugenii
ENSLOCG00000000535	si:dkey-17e16.10	93	72.464	ENSODEG00000016161	MRPS12	98	75.385	Octodon_degus
ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	ENSONIG00000002022	si:dkey-17e16.10	100	71.429	Oreochromis_niloticus
ENSLOCG00000000535	si:dkey-17e16.10	91	74.815	ENSOCUG00000000689	MRPS12	98	74.815	Oryctolagus_cuniculus
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSORLG00000007040	si:dkey-17e16.10	100	70.748	Oryzias_latipes
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSORLG00020011268	MRPS12	100	70.748	Oryzias_latipes_hni
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSORLG00015009378	MRPS12	100	70.748	Oryzias_latipes_hsok
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSOMEG00000001427	si:dkey-17e16.10	100	70.748	Oryzias_melastigma
ENSLOCG00000000535	si:dkey-17e16.10	80	71.552	ENSOGAG00000025634	-	83	71.552	Otolemur_garnettii
ENSLOCG00000000535	si:dkey-17e16.10	80	79.310	ENSOGAG00000008295	-	83	79.310	Otolemur_garnettii
ENSLOCG00000000535	si:dkey-17e16.10	78	80.531	ENSOARG00000005927	MRPS12	81	80.531	Ovis_aries
ENSLOCG00000000535	si:dkey-17e16.10	75	81.651	ENSPPAG00000041637	MRPS12	79	81.651	Pan_paniscus
ENSLOCG00000000535	si:dkey-17e16.10	92	71.324	ENSPPRG00000011742	MRPS12	98	71.324	Panthera_pardus
ENSLOCG00000000535	si:dkey-17e16.10	61	85.227	ENSPTIG00000008427	MRPS12	76	82.292	Panthera_tigris_altaica
ENSLOCG00000000535	si:dkey-17e16.10	75	81.651	ENSPTRG00000010948	MRPS12	79	81.651	Pan_troglodytes
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSPANG00000021673	MRPS12	79	81.818	Papio_anubis
ENSLOCG00000000535	si:dkey-17e16.10	100	73.973	ENSPKIG00000006716	si:dkey-17e16.10	100	73.973	Paramormyrops_kingsleyae
ENSLOCG00000000535	si:dkey-17e16.10	99	71.242	ENSPSIG00000014383	MRPS12	100	71.242	Pelodiscus_sinensis
ENSLOCG00000000535	si:dkey-17e16.10	100	70.345	ENSPMGG00000009631	si:dkey-17e16.10	100	70.345	Periophthalmus_magnuspinnatus
ENSLOCG00000000535	si:dkey-17e16.10	84	78.862	ENSPEMG00000016700	Mrps12	88	78.862	Peromyscus_maniculatus_bairdii
ENSLOCG00000000535	si:dkey-17e16.10	74	80.556	ENSPMAG00000008051	si:dkey-17e16.10	70	80.556	Petromyzon_marinus
ENSLOCG00000000535	si:dkey-17e16.10	76	80.909	ENSPCIG00000010531	-	78	80.909	Phascolarctos_cinereus
ENSLOCG00000000535	si:dkey-17e16.10	100	69.388	ENSPFOG00000018863	si:dkey-17e16.10	100	69.388	Poecilia_formosa
ENSLOCG00000000535	si:dkey-17e16.10	100	69.388	ENSPLAG00000008933	si:dkey-17e16.10	100	69.388	Poecilia_latipinna
ENSLOCG00000000535	si:dkey-17e16.10	100	69.388	ENSPMEG00000005155	si:dkey-17e16.10	95	69.388	Poecilia_mexicana
ENSLOCG00000000535	si:dkey-17e16.10	98	70.833	ENSPREG00000014123	si:dkey-17e16.10	95	70.833	Poecilia_reticulata
ENSLOCG00000000535	si:dkey-17e16.10	75	80.734	ENSPPYG00000009950	MRPS12	79	80.734	Pongo_abelii
ENSLOCG00000000535	si:dkey-17e16.10	84	78.862	ENSPCAG00000010853	MRPS12	89	78.862	Procavia_capensis
ENSLOCG00000000535	si:dkey-17e16.10	92	72.993	ENSPCOG00000020370	MRPS12	98	72.993	Propithecus_coquereli
ENSLOCG00000000535	si:dkey-17e16.10	99	67.361	ENSPVAG00000011605	MRPS12	100	67.361	Pteropus_vampyrus
ENSLOCG00000000535	si:dkey-17e16.10	100	72.109	ENSPNYG00000015506	si:dkey-17e16.10	95	72.109	Pundamilia_nyererei
ENSLOCG00000000535	si:dkey-17e16.10	85	77.236	ENSPNAG00000016315	si:dkey-17e16.10	83	77.236	Pygocentrus_nattereri
ENSLOCG00000000535	si:dkey-17e16.10	84	78.862	ENSRNOG00000019949	Mrps12	88	78.862	Rattus_norvegicus
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSRBIG00000029741	MRPS12	79	81.818	Rhinopithecus_bieti
ENSLOCG00000000535	si:dkey-17e16.10	76	81.818	ENSRROG00000030787	MRPS12	79	81.818	Rhinopithecus_roxellana
ENSLOCG00000000535	si:dkey-17e16.10	76	80.909	ENSSBOG00000025707	MRPS12	79	80.909	Saimiri_boliviensis_boliviensis
ENSLOCG00000000535	si:dkey-17e16.10	100	72.603	ENSSFOG00015018102	mrps12	100	72.603	Scleropages_formosus
ENSLOCG00000000535	si:dkey-17e16.10	100	70.748	ENSSMAG00000004249	si:dkey-17e16.10	100	70.748	Scophthalmus_maximus
ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	ENSSDUG00000020424	si:dkey-17e16.10	99	71.429	Seriola_dumerili
ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	ENSSLDG00000016320	si:dkey-17e16.10	99	71.429	Seriola_lalandi_dorsalis
ENSLOCG00000000535	si:dkey-17e16.10	95	71.739	ENSSARG00000006985	MRPS12	96	71.739	Sorex_araneus
ENSLOCG00000000535	si:dkey-17e16.10	99	69.737	ENSSPUG00000004675	MRPS12	99	69.737	Sphenodon_punctatus
ENSLOCG00000000535	si:dkey-17e16.10	100	68.027	ENSSPAG00000012951	si:dkey-17e16.10	100	68.027	Stegastes_partitus
ENSLOCG00000000535	si:dkey-17e16.10	77	80.357	ENSSSCG00000031860	MRPS12	88	80.357	Sus_scrofa
ENSLOCG00000000535	si:dkey-17e16.10	76	80.909	ENSTGUG00000016491	MRPS12	100	80.909	Taeniopygia_guttata
ENSLOCG00000000535	si:dkey-17e16.10	83	82.645	ENSTRUG00000017342	si:dkey-17e16.10	85	82.645	Takifugu_rubripes
ENSLOCG00000000535	si:dkey-17e16.10	83	80.992	ENSTNIG00000004898	si:dkey-17e16.10	88	80.992	Tetraodon_nigroviridis
ENSLOCG00000000535	si:dkey-17e16.10	92	73.529	ENSTBEG00000001288	MRPS12	98	73.529	Tupaia_belangeri
ENSLOCG00000000535	si:dkey-17e16.10	83	79.339	ENSTTRG00000011794	MRPS12	86	79.339	Tursiops_truncatus
ENSLOCG00000000535	si:dkey-17e16.10	99	65.278	ENSUAMG00000011626	MRPS12	100	65.278	Ursus_americanus
ENSLOCG00000000535	si:dkey-17e16.10	95	68.841	ENSUMAG00000019235	MRPS12	100	66.667	Ursus_maritimus
ENSLOCG00000000535	si:dkey-17e16.10	92	71.324	ENSVVUG00000006433	MRPS12	57	81.250	Vulpes_vulpes
ENSLOCG00000000535	si:dkey-17e16.10	83	83.333	ENSXETG00000005326	mrps12	80	83.333	Xenopus_tropicalis
ENSLOCG00000000535	si:dkey-17e16.10	98	72.222	ENSXCOG00000020766	si:dkey-17e16.10	95	72.222	Xiphophorus_couchianus
ENSLOCG00000000535	si:dkey-17e16.10	98	72.222	ENSXMAG00000027119	si:dkey-17e16.10	99	72.222	Xiphophorus_maculatus