EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000581 (Gene tree)
Gene ID: 102692514
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 7134 bases
Position: chrLG21:78658-85791
Accession: 102692514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000646	PRP4	PF08799.11	3.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000648	-	3673	XM_006640489	ENSLOCP00000000646	507 (aa)	XP_006640552	W5LWY9

Gene Model

Click here to download ENSLOCG00000000581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000581	prpf4	63	30.729	ENSLOCG00000008853	tbl3	62	30.729
ENSLOCG00000000581	prpf4	58	35.802	ENSLOCG00000016379	POC1B	60	35.802
ENSLOCG00000000581	prpf4	58	32.500	ENSLOCG00000013801	poc1a	70	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000581	prpf4	99	81.584	ENSG00000136875	PRPF4	97	81.584	Homo_sapiens
ENSLOCG00000000581	prpf4	99	81.818	ENSAPOG00000014132	prpf4	99	81.573	Acanthochromis_polyacanthus
ENSLOCG00000000581	prpf4	99	81.782	ENSAMEG00000013048	PRPF4	95	81.782	Ailuropoda_melanoleuca
ENSLOCG00000000581	prpf4	100	81.765	ENSACIG00000005579	prpf4	100	81.765	Amphilophus_citrinellus
ENSLOCG00000000581	prpf4	100	81.996	ENSAOCG00000005457	prpf4	100	81.765	Amphiprion_ocellaris
ENSLOCG00000000581	prpf4	100	81.800	ENSAPEG00000000776	prpf4	100	81.569	Amphiprion_percula
ENSLOCG00000000581	prpf4	100	81.961	ENSATEG00000023013	prpf4	100	81.961	Anabas_testudineus
ENSLOCG00000000581	prpf4	99	81.188	ENSAPLG00000006534	PRPF4	94	81.188	Anas_platyrhynchos
ENSLOCG00000000581	prpf4	99	80.118	ENSACAG00000015110	PRPF4	97	80.118	Anolis_carolinensis
ENSLOCG00000000581	prpf4	99	81.782	ENSANAG00000022464	PRPF4	93	81.782	Aotus_nancymaae
ENSLOCG00000000581	prpf4	100	81.373	ENSACLG00000019031	prpf4	100	81.373	Astatotilapia_calliptera
ENSLOCG00000000581	prpf4	100	66.539	ENSAMXG00000006756	prpf4	100	78.698	Astyanax_mexicanus
ENSLOCG00000000581	prpf4	99	81.782	ENSBTAG00000004571	PRPF4	97	81.782	Bos_taurus
ENSLOCG00000000581	prpf4	93	45.032	WBGene00007972	prp-4	95	45.032	Caenorhabditis_elegans
ENSLOCG00000000581	prpf4	99	81.782	ENSCJAG00000017856	PRPF4	97	81.782	Callithrix_jacchus
ENSLOCG00000000581	prpf4	99	81.782	ENSCAFG00000003224	PRPF4	94	81.782	Canis_familiaris
ENSLOCG00000000581	prpf4	99	81.782	ENSCAFG00020022637	PRPF4	97	81.782	Canis_lupus_dingo
ENSLOCG00000000581	prpf4	99	81.584	ENSCHIG00000024648	-	97	81.584	Capra_hircus
ENSLOCG00000000581	prpf4	99	81.584	ENSTSYG00000010366	PRPF4	97	81.584	Carlito_syrichta
ENSLOCG00000000581	prpf4	82	74.463	ENSCAPG00000008935	PRPF4	97	74.463	Cavia_aperea
ENSLOCG00000000581	prpf4	99	80.990	ENSCPOG00000010747	-	97	80.990	Cavia_porcellus
ENSLOCG00000000581	prpf4	99	75.644	ENSCPOG00000014729	-	97	75.644	Cavia_porcellus
ENSLOCG00000000581	prpf4	99	81.584	ENSCCAG00000028990	PRPF4	97	81.584	Cebus_capucinus
ENSLOCG00000000581	prpf4	99	81.782	ENSCATG00000021552	PRPF4	97	81.782	Cercocebus_atys
ENSLOCG00000000581	prpf4	99	81.386	ENSCLAG00000013448	PRPF4	97	81.386	Chinchilla_lanigera
ENSLOCG00000000581	prpf4	89	80.973	ENSCHOG00000007233	PRPF4	100	80.973	Choloepus_hoffmanni
ENSLOCG00000000581	prpf4	100	80.671	ENSCPBG00000019136	PRPF4	73	80.671	Chrysemys_picta_bellii
ENSLOCG00000000581	prpf4	97	60.931	ENSCING00000001299	-	94	62.185	Ciona_intestinalis
ENSLOCG00000000581	prpf4	99	58.847	ENSCSAVG00000009178	-	99	60.776	Ciona_savignyi
ENSLOCG00000000581	prpf4	99	81.782	ENSCANG00000003246	PRPF4	97	81.782	Colobus_angolensis_palliatus
ENSLOCG00000000581	prpf4	99	81.980	ENSCGRG00001016992	Prpf4	97	81.980	Cricetulus_griseus_chok1gshd
ENSLOCG00000000581	prpf4	99	81.980	ENSCGRG00000017560	Prpf4	97	81.980	Cricetulus_griseus_crigri
ENSLOCG00000000581	prpf4	100	79.921	ENSCSEG00000020451	prpf4	100	79.921	Cynoglossus_semilaevis
ENSLOCG00000000581	prpf4	100	85.404	ENSDARG00000067639	prpf4	100	85.404	Danio_rerio
ENSLOCG00000000581	prpf4	99	81.584	ENSDNOG00000013203	PRPF4	97	81.584	Dasypus_novemcinctus
ENSLOCG00000000581	prpf4	99	81.782	ENSDORG00000026275	Prpf4	97	81.782	Dipodomys_ordii
ENSLOCG00000000581	prpf4	99	50.545	FBgn0036733	U4-U6-60K	82	56.798	Drosophila_melanogaster
ENSLOCG00000000581	prpf4	99	81.782	ENSETEG00000020389	PRPF4	97	81.782	Echinops_telfairi
ENSLOCG00000000581	prpf4	99	70.270	ENSEBUG00000015229	prpf4	88	70.495	Eptatretus_burgeri
ENSLOCG00000000581	prpf4	99	81.782	ENSEASG00005022678	PRPF4	97	81.782	Equus_asinus_asinus
ENSLOCG00000000581	prpf4	99	81.782	ENSECAG00000007072	PRPF4	97	81.782	Equus_caballus
ENSLOCG00000000581	prpf4	99	64.626	ENSEEUG00000007480	PRPF4	96	64.626	Erinaceus_europaeus
ENSLOCG00000000581	prpf4	100	85.799	ENSELUG00000007510	prpf4	100	85.799	Esox_lucius
ENSLOCG00000000581	prpf4	99	81.782	ENSFCAG00000005514	PRPF4	97	81.782	Felis_catus
ENSLOCG00000000581	prpf4	99	79.864	ENSFALG00000005423	PRPF4	85	79.864	Ficedula_albicollis
ENSLOCG00000000581	prpf4	99	81.584	ENSFDAG00000005839	PRPF4	97	81.584	Fukomys_damarensis
ENSLOCG00000000581	prpf4	100	81.569	ENSFHEG00000001300	prpf4	100	81.569	Fundulus_heteroclitus
ENSLOCG00000000581	prpf4	99	81.028	ENSGALG00000008857	PRPF4	94	81.028	Gallus_gallus
ENSLOCG00000000581	prpf4	94	77.508	ENSGAFG00000012164	prpf4	69	77.508	Gambusia_affinis
ENSLOCG00000000581	prpf4	100	72.745	ENSGACG00000015476	prpf4	100	72.353	Gasterosteus_aculeatus
ENSLOCG00000000581	prpf4	100	80.868	ENSGAGG00000025029	PRPF4	94	80.868	Gopherus_agassizii
ENSLOCG00000000581	prpf4	99	81.584	ENSGGOG00000006943	PRPF4	97	81.584	Gorilla_gorilla
ENSLOCG00000000581	prpf4	100	81.373	ENSHBUG00000000562	prpf4	100	81.373	Haplochromis_burtoni
ENSLOCG00000000581	prpf4	99	65.545	ENSHGLG00000003838	-	97	65.545	Heterocephalus_glaber_female
ENSLOCG00000000581	prpf4	96	70.226	ENSHGLG00000016628	-	92	71.822	Heterocephalus_glaber_female
ENSLOCG00000000581	prpf4	99	81.386	ENSHGLG00000015191	PRPF4	97	81.386	Heterocephalus_glaber_female
ENSLOCG00000000581	prpf4	99	65.545	ENSHGLG00100005571	-	97	65.545	Heterocephalus_glaber_male
ENSLOCG00000000581	prpf4	100	85.207	ENSIPUG00000017956	PRPF4	100	85.207	Ictalurus_punctatus
ENSLOCG00000000581	prpf4	99	81.584	ENSSTOG00000027833	PRPF4	97	81.584	Ictidomys_tridecemlineatus
ENSLOCG00000000581	prpf4	99	81.584	ENSJJAG00000008838	Prpf4	97	81.584	Jaculus_jaculus
ENSLOCG00000000581	prpf4	100	81.176	ENSKMAG00000013236	prpf4	100	80.980	Kryptolebias_marmoratus
ENSLOCG00000000581	prpf4	100	80.906	ENSLBEG00000020611	prpf4	100	80.906	Labrus_bergylta
ENSLOCG00000000581	prpf4	100	77.210	ENSLACG00000016317	PRPF4	97	77.210	Latimeria_chalumnae
ENSLOCG00000000581	prpf4	99	81.782	ENSLAFG00000018225	PRPF4	97	81.782	Loxodonta_africana
ENSLOCG00000000581	prpf4	99	81.584	ENSMFAG00000039397	PRPF4	97	81.584	Macaca_fascicularis
ENSLOCG00000000581	prpf4	99	81.782	ENSMMUG00000005844	PRPF4	97	81.782	Macaca_mulatta
ENSLOCG00000000581	prpf4	99	73.069	ENSMNEG00000033737	PRPF4	97	73.069	Macaca_nemestrina
ENSLOCG00000000581	prpf4	99	81.782	ENSMLEG00000040284	PRPF4	97	81.782	Mandrillus_leucophaeus
ENSLOCG00000000581	prpf4	100	81.569	ENSMAMG00000020141	prpf4	100	81.569	Mastacembelus_armatus
ENSLOCG00000000581	prpf4	100	81.373	ENSMZEG00005023205	prpf4	100	81.373	Maylandia_zebra
ENSLOCG00000000581	prpf4	99	80.435	ENSMGAG00000001796	PRPF4	94	79.020	Meleagris_gallopavo
ENSLOCG00000000581	prpf4	99	81.980	ENSMAUG00000018022	Prpf4	97	81.980	Mesocricetus_auratus
ENSLOCG00000000581	prpf4	99	81.386	ENSMICG00000015022	PRPF4	97	81.386	Microcebus_murinus
ENSLOCG00000000581	prpf4	99	81.584	ENSMOCG00000018273	Prpf4	97	81.584	Microtus_ochrogaster
ENSLOCG00000000581	prpf4	100	81.102	ENSMMOG00000021177	prpf4	100	81.102	Mola_mola
ENSLOCG00000000581	prpf4	99	81.400	ENSMODG00000004444	-	96	81.400	Monodelphis_domestica
ENSLOCG00000000581	prpf4	99	81.400	ENSMODG00000025096	-	93	81.400	Monodelphis_domestica
ENSLOCG00000000581	prpf4	100	81.373	ENSMALG00000013624	prpf4	100	80.980	Monopterus_albus
ENSLOCG00000000581	prpf4	99	81.980	MGP_CAROLIEiJ_G0026078	Prpf4	97	81.980	Mus_caroli
ENSLOCG00000000581	prpf4	99	81.980	ENSMUSG00000066148	Prpf4	97	81.980	Mus_musculus
ENSLOCG00000000581	prpf4	99	82.178	MGP_PahariEiJ_G0028413	Prpf4	97	82.178	Mus_pahari
ENSLOCG00000000581	prpf4	99	81.980	MGP_SPRETEiJ_G0027042	Prpf4	97	81.980	Mus_spretus
ENSLOCG00000000581	prpf4	99	81.782	ENSMPUG00000007883	PRPF4	97	81.782	Mustela_putorius_furo
ENSLOCG00000000581	prpf4	99	80.000	ENSMLUG00000008626	-	94	80.000	Myotis_lucifugus
ENSLOCG00000000581	prpf4	99	81.386	ENSMLUG00000015309	-	94	81.386	Myotis_lucifugus
ENSLOCG00000000581	prpf4	99	76.436	ENSNGAG00000000468	Prpf4	97	76.436	Nannospalax_galili
ENSLOCG00000000581	prpf4	100	81.569	ENSNBRG00000007972	prpf4	100	81.569	Neolamprologus_brichardi
ENSLOCG00000000581	prpf4	99	81.782	ENSNLEG00000016647	PRPF4	97	81.782	Nomascus_leucogenys
ENSLOCG00000000581	prpf4	99	81.400	ENSMEUG00000013256	PRPF4	97	81.400	Notamacropus_eugenii
ENSLOCG00000000581	prpf4	99	81.782	ENSOPRG00000005302	PRPF4	97	81.782	Ochotona_princeps
ENSLOCG00000000581	prpf4	99	81.386	ENSODEG00000018147	PRPF4	97	81.386	Octodon_degus
ENSLOCG00000000581	prpf4	100	81.373	ENSONIG00000012671	prpf4	100	81.373	Oreochromis_niloticus
ENSLOCG00000000581	prpf4	99	81.584	ENSOCUG00000005046	PRPF4	97	81.584	Oryctolagus_cuniculus
ENSLOCG00000000581	prpf4	100	79.331	ENSORLG00000019641	prpf4	100	79.331	Oryzias_latipes
ENSLOCG00000000581	prpf4	100	79.331	ENSORLG00020019438	prpf4	100	79.331	Oryzias_latipes_hni
ENSLOCG00000000581	prpf4	100	78.937	ENSOMEG00000020941	prpf4	100	79.626	Oryzias_melastigma
ENSLOCG00000000581	prpf4	99	77.822	ENSOGAG00000007802	PRPF4	95	77.822	Otolemur_garnettii
ENSLOCG00000000581	prpf4	99	81.584	ENSOARG00000006319	PRPF4	94	81.584	Ovis_aries
ENSLOCG00000000581	prpf4	99	81.584	ENSPPAG00000041797	PRPF4	97	81.584	Pan_paniscus
ENSLOCG00000000581	prpf4	99	81.782	ENSPPRG00000014360	PRPF4	97	81.782	Panthera_pardus
ENSLOCG00000000581	prpf4	99	81.782	ENSPTIG00000009574	PRPF4	97	81.782	Panthera_tigris_altaica
ENSLOCG00000000581	prpf4	99	81.584	ENSPTRG00000021274	PRPF4	97	81.584	Pan_troglodytes
ENSLOCG00000000581	prpf4	99	81.584	ENSPANG00000025776	PRPF4	93	81.584	Papio_anubis
ENSLOCG00000000581	prpf4	100	87.574	ENSPKIG00000017259	prpf4	100	87.771	Paramormyrops_kingsleyae
ENSLOCG00000000581	prpf4	100	80.868	ENSPSIG00000010713	PRPF4	89	80.868	Pelodiscus_sinensis
ENSLOCG00000000581	prpf4	100	59.041	ENSPMGG00000000997	prpf4	98	59.410	Periophthalmus_magnuspinnatus
ENSLOCG00000000581	prpf4	99	81.980	ENSPEMG00000024115	Prpf4	97	81.980	Peromyscus_maniculatus_bairdii
ENSLOCG00000000581	prpf4	99	81.600	ENSPCIG00000003821	PRPF4	97	81.600	Phascolarctos_cinereus
ENSLOCG00000000581	prpf4	100	74.708	ENSPFOG00000013524	prpf4	99	77.508	Poecilia_formosa
ENSLOCG00000000581	prpf4	93	76.087	ENSPLAG00000011620	prpf4	99	73.860	Poecilia_latipinna
ENSLOCG00000000581	prpf4	98	77.876	ENSPMEG00000006813	prpf4	100	77.876	Poecilia_mexicana
ENSLOCG00000000581	prpf4	99	81.980	ENSPCAG00000002561	PRPF4	98	81.980	Procavia_capensis
ENSLOCG00000000581	prpf4	99	81.584	ENSPCOG00000011975	PRPF4	97	81.584	Propithecus_coquereli
ENSLOCG00000000581	prpf4	99	78.812	ENSPVAG00000004708	PRPF4	97	78.812	Pteropus_vampyrus
ENSLOCG00000000581	prpf4	100	81.373	ENSPNYG00000008013	prpf4	100	81.373	Pundamilia_nyererei
ENSLOCG00000000581	prpf4	100	86.588	ENSPNAG00000000697	prpf4	100	86.588	Pygocentrus_nattereri
ENSLOCG00000000581	prpf4	99	81.782	ENSRNOG00000014777	Prpf4	97	81.782	Rattus_norvegicus
ENSLOCG00000000581	prpf4	99	81.782	ENSRBIG00000040221	PRPF4	97	81.782	Rhinopithecus_bieti
ENSLOCG00000000581	prpf4	99	81.782	ENSRROG00000040240	PRPF4	97	81.782	Rhinopithecus_roxellana
ENSLOCG00000000581	prpf4	99	81.600	ENSSHAG00000017658	PRPF4	96	81.600	Sarcophilus_harrisii
ENSLOCG00000000581	prpf4	100	88.166	ENSSFOG00015008963	prpf4	100	88.166	Scleropages_formosus
ENSLOCG00000000581	prpf4	100	80.392	ENSSMAG00000008889	prpf4	100	80.196	Scophthalmus_maximus
ENSLOCG00000000581	prpf4	99	78.740	ENSSDUG00000022083	prpf4	99	78.740	Seriola_dumerili
ENSLOCG00000000581	prpf4	99	78.346	ENSSLDG00000008115	prpf4	99	78.346	Seriola_lalandi_dorsalis
ENSLOCG00000000581	prpf4	99	80.632	ENSSPUG00000015582	PRPF4	97	80.632	Sphenodon_punctatus
ENSLOCG00000000581	prpf4	100	75.439	ENSSPAG00000011286	prpf4	100	75.634	Stegastes_partitus
ENSLOCG00000000581	prpf4	99	81.782	ENSSSCG00000024648	PRPF4	97	81.782	Sus_scrofa
ENSLOCG00000000581	prpf4	97	81.744	ENSTGUG00000002623	PRPF4	96	82.803	Taeniopygia_guttata
ENSLOCG00000000581	prpf4	100	80.588	ENSTRUG00000008853	prpf4	100	80.354	Takifugu_rubripes
ENSLOCG00000000581	prpf4	100	80.118	ENSTNIG00000013250	prpf4	100	80.118	Tetraodon_nigroviridis
ENSLOCG00000000581	prpf4	99	74.257	ENSTBEG00000000821	PRPF4	97	74.257	Tupaia_belangeri
ENSLOCG00000000581	prpf4	89	83.557	ENSTTRG00000003246	PRPF4	85	83.557	Tursiops_truncatus
ENSLOCG00000000581	prpf4	70	72.394	ENSUAMG00000018288	PRPF4	96	72.394	Ursus_americanus
ENSLOCG00000000581	prpf4	99	81.188	ENSUMAG00000019375	PRPF4	97	81.188	Ursus_maritimus
ENSLOCG00000000581	prpf4	99	81.386	ENSVPAG00000005281	PRPF4	97	81.386	Vicugna_pacos
ENSLOCG00000000581	prpf4	99	81.548	ENSVVUG00000002476	PRPF4	99	81.548	Vulpes_vulpes
ENSLOCG00000000581	prpf4	71	59.610	ENSXCOG00000006101	prpf4	93	62.376	Xiphophorus_couchianus
ENSLOCG00000000581	prpf4	99	67.312	ENSXMAG00000002750	prpf4	100	69.608	Xiphophorus_maculatus