EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000597 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 8960 bases
Position: chrJH591833.1:2494-11453
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000656	RVT_1	PF00078.27	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000659	-	1338	-	ENSLOCP00000000656	446 (aa)	-	W5LWZ9

Gene Model

Click here to download ENSLOCG00000000597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000597	-	97	35.371	ENSLOCG00000000531	-	72	35.371
ENSLOCG00000000597	-	58	54.717	ENSLOCG00000017441	-	77	54.717
ENSLOCG00000000597	-	77	41.199	ENSLOCG00000008433	-	56	41.199
ENSLOCG00000000597	-	98	31.279	ENSLOCG00000000437	-	50	31.279
ENSLOCG00000000597	-	99	33.630	ENSLOCG00000013905	-	60	33.630
ENSLOCG00000000597	-	98	30.023	ENSLOCG00000000179	-	66	30.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000597	-	68	34.405	ENSDARG00000086849	si:dkey-187k19.2	54	34.405	Danio_rerio
ENSLOCG00000000597	-	50	35.268	ENSLBEG00000018239	-	74	35.268	Labrus_bergylta
ENSLOCG00000000597	-	97	30.464	ENSLBEG00000022930	-	54	30.201	Labrus_bergylta
ENSLOCG00000000597	-	100	31.006	ENSORLG00020013618	-	58	31.006	Oryzias_latipes_hni
ENSLOCG00000000597	-	99	30.704	ENSORLG00020008765	-	57	30.670	Oryzias_latipes_hni
ENSLOCG00000000597	-	100	31.006	ENSORLG00020016067	-	50	31.006	Oryzias_latipes_hni
ENSLOCG00000000597	-	100	31.006	ENSORLG00020013755	-	58	31.006	Oryzias_latipes_hni
ENSLOCG00000000597	-	100	30.801	ENSORLG00020007542	-	55	30.801	Oryzias_latipes_hni
ENSLOCG00000000597	-	99	30.769	ENSORLG00015021204	-	54	30.736	Oryzias_latipes_hsok
ENSLOCG00000000597	-	68	37.061	ENSPFOG00000023623	-	50	37.061	Poecilia_formosa
ENSLOCG00000000597	-	52	31.915	ENSPLAG00000021304	-	55	31.915	Poecilia_latipinna
ENSLOCG00000000597	-	52	31.915	ENSPMEG00000021732	-	56	31.915	Poecilia_mexicana
ENSLOCG00000000597	-	51	41.102	ENSSFOG00015015726	-	73	41.102	Scleropages_formosus
ENSLOCG00000000597	-	50	33.036	ENSSLDG00000000237	-	71	33.036	Seriola_lalandi_dorsalis
ENSLOCG00000000597	-	54	32.129	ENSXCOG00000012075	-	56	32.129	Xiphophorus_couchianus
ENSLOCG00000000597	-	51	32.189	ENSXMAG00000028317	-	50	32.189	Xiphophorus_maculatus
ENSLOCG00000000597	-	51	32.189	ENSXMAG00000020872	-	50	32.189	Xiphophorus_maculatus