EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLOCG00000000717 (Gene tree)
Gene ID
102689645
Gene Symbol
patl1
Alias
fa11d04|wu:fa11d04|zgc:158239
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Plus strand
Length
20287 bases
Position
chrJH591434.1:149833-170119
Accession
102689645
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000000802PAT1PF09770.93.2e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000000806-3669XM_006643110ENSLOCP00000000802772 (aa)XP_015194841W5LXE5
Gene Model
Click here to download ENSLOCG00000000717's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000717's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000000717patl19947.947ENSG00000166889PATL19947.030Homo_sapiens
ENSLOCG00000000717patl15336.386ENSG00000229474PATL29938.251Homo_sapiens
ENSLOCG00000000717patl15636.099ENSAPOG00000022988patl25835.961Acanthochromis_polyacanthus
ENSLOCG00000000717patl19961.626ENSAPOG00000021290patl19963.178Acanthochromis_polyacanthus
ENSLOCG00000000717patl15336.496ENSAMEG00000014997PATL27636.957Ailuropoda_melanoleuca
ENSLOCG00000000717patl19947.642ENSAMEG00000014215PATL19946.803Ailuropoda_melanoleuca
ENSLOCG00000000717patl19963.682ENSACIG00000005182patl19963.338Amphilophus_citrinellus
ENSLOCG00000000717patl19464.199ENSAOCG00000021993patl19565.737Amphiprion_ocellaris
ENSLOCG00000000717patl16932.778ENSAOCG00000023738patl26432.778Amphiprion_ocellaris
ENSLOCG00000000717patl110060.660ENSAPEG00000021391patl110062.368Amphiprion_percula
ENSLOCG00000000717patl16532.941ENSAPEG00000011299patl26135.309Amphiprion_percula
ENSLOCG00000000717patl15632.880ENSATEG00000019567patl26033.333Anabas_testudineus
ENSLOCG00000000717patl18169.832ENSATEG00000002230patl17669.278Anabas_testudineus
ENSLOCG00000000717patl15238.971ENSAPLG00000003980PATL26438.177Anas_platyrhynchos
ENSLOCG00000000717patl15650.968ENSAPLG00000013394PATL19450.746Anas_platyrhynchos
ENSLOCG00000000717patl19948.348ENSACAG00000006607PATL19947.990Anolis_carolinensis
ENSLOCG00000000717patl19947.642ENSANAG00000023078PATL19947.152Aotus_nancymaae
ENSLOCG00000000717patl110061.547ENSACLG00000005144patl110061.620Astatotilapia_calliptera
ENSLOCG00000000717patl17532.258ENSACLG00000010326patl27231.919Astatotilapia_calliptera
ENSLOCG00000000717patl110065.157ENSAMXG00000010731patl110067.372Astyanax_mexicanus
ENSLOCG00000000717patl15735.955ENSAMXG00000020293patl25736.139Astyanax_mexicanus
ENSLOCG00000000717patl19947.705ENSBTAG00000005913PATL19947.579Bos_taurus
ENSLOCG00000000717patl19947.521ENSCJAG00000016192PATL19947.273Callithrix_jacchus
ENSLOCG00000000717patl15236.049ENSCJAG00000002379PATL27236.765Callithrix_jacchus
ENSLOCG00000000717patl19947.642ENSCAFG00000007581PATL19946.803Canis_familiaris
ENSLOCG00000000717patl16035.070ENSCAFG00000013629PATL27836.136Canis_familiaris
ENSLOCG00000000717patl16035.070ENSCAFG00020022169PATL27836.136Canis_lupus_dingo
ENSLOCG00000000717patl19947.700ENSCAFG00020001648PATL110046.860Canis_lupus_dingo
ENSLOCG00000000717patl19947.286ENSCHIG00000025913PATL19947.279Capra_hircus
ENSLOCG00000000717patl15437.037ENSCHIG00000026665PATL27737.037Capra_hircus
ENSLOCG00000000717patl19948.103ENSTSYG00000012748PATL19547.503Carlito_syrichta
ENSLOCG00000000717patl19947.052ENSCAPG00000013668PATL19946.498Cavia_aperea
ENSLOCG00000000717patl19946.108ENSCPOG00000006827PATL19945.745Cavia_porcellus
ENSLOCG00000000717patl19947.521ENSCCAG00000023759PATL19947.030Cebus_capucinus
ENSLOCG00000000717patl19947.521ENSCATG00000009629PATL19947.030Cercocebus_atys
ENSLOCG00000000717patl19847.124ENSCLAG00000003427PATL19646.096Chinchilla_lanigera
ENSLOCG00000000717patl17951.212ENSCSAG00000006095PATL19451.216Chlorocebus_sabaeus
ENSLOCG00000000717patl16658.586ENSCHOG00000001611PATL18258.586Choloepus_hoffmanni
ENSLOCG00000000717patl15537.471ENSCPBG00000006150PATL25938.084Chrysemys_picta_bellii
ENSLOCG00000000717patl16151.351ENSCING00000021535-7731.158Ciona_intestinalis
ENSLOCG00000000717patl19947.458ENSCANG00000039197PATL19946.966Colobus_angolensis_palliatus
ENSLOCG00000000717patl15336.715ENSCANG00000013856PATL27337.170Colobus_angolensis_palliatus
ENSLOCG00000000717patl19947.927ENSCGRG00001024927Patl19947.439Cricetulus_griseus_chok1gshd
ENSLOCG00000000717patl19947.805ENSCGRG00000000461Patl19947.317Cricetulus_griseus_crigri
ENSLOCG00000000717patl19766.980ENSCSEG00000008261patl19663.960Cynoglossus_semilaevis
ENSLOCG00000000717patl15733.260ENSCSEG00000009438patl25733.002Cynoglossus_semilaevis
ENSLOCG00000000717patl19957.143ENSCVAG00000006664patl110056.456Cyprinodon_variegatus
ENSLOCG00000000717patl15632.127ENSCVAG00000016203patl26032.020Cyprinodon_variegatus
ENSLOCG00000000717patl110065.625ENSDARG00000017423patl110064.086Danio_rerio
ENSLOCG00000000717patl16536.863ENSDARG00000089567patl25638.686Danio_rerio
ENSLOCG00000000717patl19844.172ENSDNOG00000038865PATL19950.642Dasypus_novemcinctus
ENSLOCG00000000717patl19947.400ENSDORG00000000237Patl19946.788Dipodomys_ordii
ENSLOCG00000000717patl19947.947ENSEASG00005007963PATL19947.694Equus_asinus_asinus
ENSLOCG00000000717patl19947.947ENSECAG00000011411PATL19947.694Equus_caballus
ENSLOCG00000000717patl110063.133ENSELUG00000024249patl19964.384Esox_lucius
ENSLOCG00000000717patl16134.898ENSELUG00000023244patl25436.049Esox_lucius
ENSLOCG00000000717patl15835.099ENSFCAG00000027170PATL27436.930Felis_catus
ENSLOCG00000000717patl19947.700ENSFCAG00000015573PATL19947.273Felis_catus
ENSLOCG00000000717patl19949.077ENSFALG00000012150PATL19949.022Ficedula_albicollis
ENSLOCG00000000717patl16234.118ENSFALG00000009768PATL26934.442Ficedula_albicollis
ENSLOCG00000000717patl19846.936ENSFDAG00000016128PATL19646.887Fukomys_damarensis
ENSLOCG00000000717patl19962.198ENSFHEG00000017790patl110062.574Fundulus_heteroclitus
ENSLOCG00000000717patl15434.579ENSGMOG00000005666patl29933.985Gadus_morhua
ENSLOCG00000000717patl19949.816ENSGALG00000042641PATL110049.325Gallus_gallus
ENSLOCG00000000717patl15237.255ENSGALG00000002167PATL25037.255Gallus_gallus
ENSLOCG00000000717patl18032.515ENSGAFG00000019344patl28431.741Gambusia_affinis
ENSLOCG00000000717patl110061.882ENSGAFG00000006508patl110061.922Gambusia_affinis
ENSLOCG00000000717patl19959.580ENSGACG00000016448patl19961.406Gasterosteus_aculeatus
ENSLOCG00000000717patl19948.851ENSGAGG00000004461PATL19948.975Gopherus_agassizii
ENSLOCG00000000717patl15336.386ENSGGOG00000025923PATL27336.993Gorilla_gorilla
ENSLOCG00000000717patl19947.521ENSGGOG00000004335PATL19947.030Gorilla_gorilla
ENSLOCG00000000717patl110061.547ENSHBUG00000005365patl110062.089Haplochromis_burtoni
ENSLOCG00000000717patl15635.023ENSHBUG00000005929patl26035.149Haplochromis_burtoni
ENSLOCG00000000717patl19946.796ENSHGLG00000018173PATL19946.303Heterocephalus_glaber_female
ENSLOCG00000000717patl19846.069ENSHGLG00100003453PATL19645.638Heterocephalus_glaber_male
ENSLOCG00000000717patl110060.308ENSHCOG00000001898patl110060.071Hippocampus_comes
ENSLOCG00000000717patl15633.933ENSHCOG00000016754patl25433.580Hippocampus_comes
ENSLOCG00000000717patl15534.884ENSIPUG00000020692patl25634.815Ictalurus_punctatus
ENSLOCG00000000717patl15534.977ENSSTOG00000033848PATL27335.817Ictidomys_tridecemlineatus
ENSLOCG00000000717patl19947.023ENSSTOG00000013764PATL19646.859Ictidomys_tridecemlineatus
ENSLOCG00000000717patl19947.509ENSJJAG00000010135Patl19746.941Jaculus_jaculus
ENSLOCG00000000717patl110061.955ENSKMAG00000020848patl110062.426Kryptolebias_marmoratus
ENSLOCG00000000717patl15634.763ENSKMAG00000021275patl25434.889Kryptolebias_marmoratus
ENSLOCG00000000717patl15635.586ENSLBEG00000022344patl25334.491Labrus_bergylta
ENSLOCG00000000717patl110063.626ENSLBEG00000023617patl19269.892Labrus_bergylta
ENSLOCG00000000717patl19748.092ENSLACG00000004640PATL19746.976Latimeria_chalumnae
ENSLOCG00000000717patl15136.296ENSLAFG00000031124PATL27136.951Loxodonta_africana
ENSLOCG00000000717patl19947.101ENSLAFG00000015161PATL19946.973Loxodonta_africana
ENSLOCG00000000717patl19947.521ENSMFAG00000040851PATL19947.030Macaca_fascicularis
ENSLOCG00000000717patl19947.521ENSMMUG00000017287PATL19947.030Macaca_mulatta
ENSLOCG00000000717patl19947.521ENSMNEG00000038692PATL19947.030Macaca_nemestrina
ENSLOCG00000000717patl19947.400ENSMLEG00000030044PATL19947.030Mandrillus_leucophaeus
ENSLOCG00000000717patl15634.932ENSMAMG00000013327patl26035.236Mastacembelus_armatus
ENSLOCG00000000717patl19964.848ENSMAMG00000003950patl19965.345Mastacembelus_armatus
ENSLOCG00000000717patl110061.665ENSMZEG00005013404patl110061.502Maylandia_zebra
ENSLOCG00000000717patl17532.258ENSMZEG00005014292patl27231.919Maylandia_zebra
ENSLOCG00000000717patl15237.317ENSMGAG00000001309PATL26437.255Meleagris_gallopavo
ENSLOCG00000000717patl19248.684ENSMGAG00000003406PATL19647.418Meleagris_gallopavo
ENSLOCG00000000717patl19945.115ENSMICG00000004172PATL19846.965Microcebus_murinus
ENSLOCG00000000717patl19948.049ENSMOCG00000010087Patl19947.683Microtus_ochrogaster
ENSLOCG00000000717patl15634.521ENSMOCG00000015367Patl27236.272Microtus_ochrogaster
ENSLOCG00000000717patl18284.211ENSMMOG00000013711patl19282.456Mola_mola
ENSLOCG00000000717patl19949.575ENSMODG00000020201PATL19948.474Monodelphis_domestica
ENSLOCG00000000717patl15436.427ENSMODG00000017690PATL27436.490Monodelphis_domestica
ENSLOCG00000000717patl15234.913ENSMALG00000008131patl25134.913Monopterus_albus
ENSLOCG00000000717patl19563.208ENSMALG00000018706patl110063.073Monopterus_albus
ENSLOCG00000000717patl19946.988MGP_CAROLIEiJ_G0022739Patl19946.554Mus_caroli
ENSLOCG00000000717patl19946.811ENSMUSG00000046139Patl19946.627Mus_musculus
ENSLOCG00000000717patl19947.816MGP_PahariEiJ_G0014233Patl19946.747Mus_pahari
ENSLOCG00000000717patl19947.573MGP_SPRETEiJ_G0023652Patl19946.627Mus_spretus
ENSLOCG00000000717patl19947.585ENSMPUG00000014607PATL19946.683Mustela_putorius_furo
ENSLOCG00000000717patl19947.783ENSMLUG00000011169PATL19947.264Myotis_lucifugus
ENSLOCG00000000717patl19947.590ENSNGAG00000003682Patl19947.343Nannospalax_galili
ENSLOCG00000000717patl15634.713ENSNBRG00000011745patl25734.653Neolamprologus_brichardi
ENSLOCG00000000717patl15336.386ENSNLEG00000005673PATL27436.993Nomascus_leucogenys
ENSLOCG00000000717patl19946.107ENSNLEG00000013081PATL110045.610Nomascus_leucogenys
ENSLOCG00000000717patl16157.100ENSMEUG00000009391PATL17357.100Notamacropus_eugenii
ENSLOCG00000000717patl16656.633ENSOPRG00000007963PATL17558.743Ochotona_princeps
ENSLOCG00000000717patl17346.341ENSODEG00000001792PATL18846.748Octodon_degus
ENSLOCG00000000717patl18384.211ENSONIG00000004170patl19578.125Oreochromis_niloticus
ENSLOCG00000000717patl17532.428ENSONIG00000011519patl27231.919Oreochromis_niloticus
ENSLOCG00000000717patl15057.506ENSOANG00000011117-8959.563Ornithorhynchus_anatinus
ENSLOCG00000000717patl15235.961ENSOANG00000001538-8436.788Ornithorhynchus_anatinus
ENSLOCG00000000717patl19947.763ENSOCUG00000002156PATL19947.636Oryctolagus_cuniculus
ENSLOCG00000000717patl15634.169ENSOCUG00000006339PATL27435.787Oryctolagus_cuniculus
ENSLOCG00000000717patl15635.253ENSORLG00000005780patl25435.627Oryzias_latipes
ENSLOCG00000000717patl15635.253ENSORLG00020016506patl25235.627Oryzias_latipes_hni
ENSLOCG00000000717patl15635.253ENSORLG00015014500patl25435.627Oryzias_latipes_hsok
ENSLOCG00000000717patl17865.909ENSORLG00015022240patl17767.258Oryzias_latipes_hsok
ENSLOCG00000000717patl15236.296ENSOMEG00000021628patl27032.948Oryzias_melastigma
ENSLOCG00000000717patl19947.642ENSOGAG00000004351PATL19947.030Otolemur_garnettii
ENSLOCG00000000717patl15434.123ENSOGAG00000004709PATL27334.383Otolemur_garnettii
ENSLOCG00000000717patl19847.259ENSOARG00000012005PATL19247.744Ovis_aries
ENSLOCG00000000717patl15136.000ENSOARG00000003762PATL27236.318Ovis_aries
ENSLOCG00000000717patl15336.298ENSPPAG00000007221PATL27337.143Pan_paniscus
ENSLOCG00000000717patl19947.521ENSPPAG00000034275PATL19947.030Pan_paniscus
ENSLOCG00000000717patl15834.879ENSPPRG00000004279PATL27436.691Panthera_pardus
ENSLOCG00000000717patl19847.555ENSPPRG00000020639PATL19647.362Panthera_pardus
ENSLOCG00000000717patl19947.700ENSPTIG00000019298PATL19947.273Panthera_tigris_altaica
ENSLOCG00000000717patl15834.658ENSPTIG00000018964PATL27436.451Panthera_tigris_altaica
ENSLOCG00000000717patl19944.717ENSPTRG00000003697PATL110044.349Pan_troglodytes
ENSLOCG00000000717patl15336.386ENSPTRG00000041536PATL27336.993Pan_troglodytes
ENSLOCG00000000717patl19947.521ENSPANG00000035620PATL19947.030Papio_anubis
ENSLOCG00000000717patl110067.884ENSPKIG00000016224patl110068.514Paramormyrops_kingsleyae
ENSLOCG00000000717patl15236.496ENSPKIG00000016887patl25536.253Paramormyrops_kingsleyae
ENSLOCG00000000717patl15335.084ENSPSIG00000017690PATL29834.230Pelodiscus_sinensis
ENSLOCG00000000717patl19949.089ENSPSIG00000016206PATL19548.846Pelodiscus_sinensis
ENSLOCG00000000717patl110063.363ENSPMGG00000002644patl110063.625Periophthalmus_magnuspinnatus
ENSLOCG00000000717patl15533.563ENSPMGG00000014550patl26234.152Periophthalmus_magnuspinnatus
ENSLOCG00000000717patl15234.719ENSPEMG00000016509Patl27035.567Peromyscus_maniculatus_bairdii
ENSLOCG00000000717patl19947.863ENSPEMG00000014215Patl19947.195Peromyscus_maniculatus_bairdii
ENSLOCG00000000717patl15235.476ENSPCIG00000018256PATL28035.476Phascolarctos_cinereus
ENSLOCG00000000717patl19949.270ENSPCIG00000010852PATL19948.305Phascolarctos_cinereus
ENSLOCG00000000717patl19830.469ENSPFOG00000007305patl28531.316Poecilia_formosa
ENSLOCG00000000717patl110063.557ENSPFOG00000007768patl110063.275Poecilia_formosa
ENSLOCG00000000717patl110062.364ENSPLAG00000018465patl110061.576Poecilia_latipinna
ENSLOCG00000000717patl110062.606ENSPMEG00000006555patl110061.807Poecilia_mexicana
ENSLOCG00000000717patl19830.469ENSPMEG00000018942patl28531.316Poecilia_mexicana
ENSLOCG00000000717patl17230.369ENSPREG00000023066patl28930.546Poecilia_reticulata
ENSLOCG00000000717patl18959.563ENSPREG00000003874patl19558.288Poecilia_reticulata
ENSLOCG00000000717patl19947.763ENSPPYG00000003230PATL19947.273Pongo_abelii
ENSLOCG00000000717patl19947.521ENSPCOG00000020770PATL19947.030Propithecus_coquereli
ENSLOCG00000000717patl15336.967ENSPCOG00000000295PATL29938.172Propithecus_coquereli
ENSLOCG00000000717patl17949.464ENSPVAG00000015239PATL19949.464Pteropus_vampyrus
ENSLOCG00000000717patl18476.667ENSPNYG00000018936patl19676.506Pundamilia_nyererei
ENSLOCG00000000717patl15634.624ENSPNYG00000017381patl26034.719Pundamilia_nyererei
ENSLOCG00000000717patl15635.160ENSPNAG00000002315patl25735.556Pygocentrus_nattereri
ENSLOCG00000000717patl110066.955ENSPNAG00000017907patl110066.915Pygocentrus_nattereri
ENSLOCG00000000717patl19947.816ENSRNOG00000021052Patl19947.030Rattus_norvegicus
ENSLOCG00000000717patl19942.111ENSRBIG00000032263PATL19941.560Rhinopithecus_bieti
ENSLOCG00000000717patl19947.521ENSRROG00000032861PATL19947.030Rhinopithecus_roxellana
ENSLOCG00000000717patl19947.642ENSSBOG00000025195PATL19947.152Saimiri_boliviensis_boliviensis
ENSLOCG00000000717patl19948.908ENSSHAG00000004309PATL19947.879Sarcophilus_harrisii
ENSLOCG00000000717patl110066.076ENSSFOG00015009614patl110067.547Scleropages_formosus
ENSLOCG00000000717patl16234.791ENSSFOG00015000720patl25537.956Scleropages_formosus
ENSLOCG00000000717patl17630.960ENSSMAG00000017262patl26334.491Scophthalmus_maximus
ENSLOCG00000000717patl19868.809ENSSMAG00000009482patl19268.837Scophthalmus_maximus
ENSLOCG00000000717patl15734.967ENSSDUG00000022927patl25434.815Seriola_dumerili
ENSLOCG00000000717patl19867.757ENSSDUG00000005362patl19268.519Seriola_dumerili
ENSLOCG00000000717patl19867.445ENSSLDG00000019146patl19268.210Seriola_lalandi_dorsalis
ENSLOCG00000000717patl15235.961ENSSLDG00000017922patl25935.961Seriola_lalandi_dorsalis
ENSLOCG00000000717patl16252.562ENSSARG00000009600PATL16851.810Sorex_araneus
ENSLOCG00000000717patl19950.184ENSSPUG00000009453PATL19950.429Sphenodon_punctatus
ENSLOCG00000000717patl19963.729ENSSPAG00000003187patl19964.975Stegastes_partitus
ENSLOCG00000000717patl15934.917ENSSPAG00000004784patl26235.952Stegastes_partitus
ENSLOCG00000000717patl19947.521ENSSSCG00000013124PATL19947.215Sus_scrofa
ENSLOCG00000000717patl19949.202ENSTGUG00000006222PATL19948.783Taeniopygia_guttata
ENSLOCG00000000717patl15034.925ENSTGUG00000004619-9836.020Taeniopygia_guttata
ENSLOCG00000000717patl15634.763ENSTRUG00000005647patl25634.243Takifugu_rubripes
ENSLOCG00000000717patl110060.530ENSTRUG00000000709patl110060.051Takifugu_rubripes
ENSLOCG00000000717patl18942.094ENSTBEG00000000796PATL18942.023Tupaia_belangeri
ENSLOCG00000000717patl16955.867ENSTTRG00000009389PATL17857.923Tursiops_truncatus
ENSLOCG00000000717patl15335.835ENSUAMG00000018533PATL27235.577Ursus_americanus
ENSLOCG00000000717patl15335.351ENSUMAG00000007738PATL27235.817Ursus_maritimus
ENSLOCG00000000717patl19847.677ENSUMAG00000018634PATL19750.369Ursus_maritimus
ENSLOCG00000000717patl19947.266ENSVVUG00000016668PATL19946.087Vulpes_vulpes
ENSLOCG00000000717patl16035.729ENSVVUG00000011576PATL27238.443Vulpes_vulpes
ENSLOCG00000000717patl15236.364ENSXETG00000014167patl26535.149Xenopus_tropicalis
ENSLOCG00000000717patl17866.250ENSXCOG00000010808patl110077.049Xiphophorus_couchianus
ENSLOCG00000000717patl110062.470ENSXMAG00000013834patl110062.136Xiphophorus_maculatus
ENSLOCG00000000717patl19830.497ENSXMAG00000018464patl27332.937Xiphophorus_maculatus

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