EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLOCG00000000796 (Gene tree)
Gene ID
102691580
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Plus strand
Length
7976 bases
Position
chrJH591418.1:106206-114181
Accession
102691580
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000000884RRM_1PF00076.221.5e-1711
ENSLOCP00000000911RRM_1PF00076.221.6e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000000916-1039XM_006642978ENSLOCP00000000911285 (aa)XP_006643041W5LXQ4
ENSLOCT00000000888-1021-ENSLOCP00000000884274 (aa)-W5LXM7
Gene Model
Click here to download ENSLOCG00000000796's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000796's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000000796pabpn16865.969ENSLOCG00000004694pabpn1l9364.851
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000000796pabpn16984.021ENSG00000100836PABPN19283.974Homo_sapiens
ENSLOCG00000000796pabpn16485.955ENSG00000258643BCL2L2-PABPN15385.955Homo_sapiens
ENSLOCG00000000796pabpn110093.333ENSAPOG00000016425pabpn110092.982Acanthochromis_polyacanthus
ENSLOCG00000000796pabpn16485.955ENSAMEG00000007048BCL2L2-PABPN19485.955Ailuropoda_melanoleuca
ENSLOCG00000000796pabpn110091.289ENSACIG00000021744pabpn110090.941Amphilophus_citrinellus
ENSLOCG00000000796pabpn17794.811ENSAOCG00000015805pabpn19595.000Amphiprion_ocellaris
ENSLOCG00000000796pabpn17794.811ENSAPEG00000009623pabpn19595.000Amphiprion_percula
ENSLOCG00000000796pabpn17794.340ENSATEG00000020531pabpn19594.545Anabas_testudineus
ENSLOCG00000000796pabpn16186.047ENSACAG00000006185-7674.091Anolis_carolinensis
ENSLOCG00000000796pabpn16785.484ENSANAG00000024513-8077.391Aotus_nancymaae
ENSLOCG00000000796pabpn110090.972ENSACLG00000016374pabpn110090.625Astatotilapia_calliptera
ENSLOCG00000000796pabpn110086.909ENSAMXG00000000452pabpn19398.182Astyanax_mexicanus
ENSLOCG00000000796pabpn16584.444ENSBTAG00000053753-6784.444Bos_taurus
ENSLOCG00000000796pabpn16785.484ENSBTAG00000006884PABPN18471.032Bos_taurus
ENSLOCG00000000796pabpn16285.632ENSBTAG00000050594-7483.871Bos_taurus
ENSLOCG00000000796pabpn15259.589WBGene00003904pabp-28656.180Caenorhabditis_elegans
ENSLOCG00000000796pabpn16984.021ENSCJAG00000007960-7977.679Callithrix_jacchus
ENSLOCG00000000796pabpn15682.051ENSCJAG00000004407-7882.051Callithrix_jacchus
ENSLOCG00000000796pabpn16984.021ENSCAFG00000011482PABPN18271.429Canis_familiaris
ENSLOCG00000000796pabpn16984.021ENSCAFG00020006651-8271.032Canis_lupus_dingo
ENSLOCG00000000796pabpn16984.021ENSCAFG00020007298-8271.032Canis_lupus_dingo
ENSLOCG00000000796pabpn16984.021ENSCHIG00000012184PABPN18271.429Capra_hircus
ENSLOCG00000000796pabpn16485.955ENSTSYG00000033996BCL2L2-PABPN18783.974Carlito_syrichta
ENSLOCG00000000796pabpn15083.453ENSCAPG00000009461-9983.453Cavia_aperea
ENSLOCG00000000796pabpn16983.505ENSCPOG00000025574PABPN18270.635Cavia_porcellus
ENSLOCG00000000796pabpn16984.021ENSCCAG00000033954BCL2L2-PABPN17977.679Cebus_capucinus
ENSLOCG00000000796pabpn16984.021ENSCATG00000038536BCL2L2-PABPN17977.679Cercocebus_atys
ENSLOCG00000000796pabpn15083.453ENSCLAG00000012423PABPN18553.506Chinchilla_lanigera
ENSLOCG00000000796pabpn16982.474ENSCSAG00000016036PABPN18269.841Chlorocebus_sabaeus
ENSLOCG00000000796pabpn16974.611ENSCHOG00000004798BCL2L2-PABPN17679.213Choloepus_hoffmanni
ENSLOCG00000000796pabpn15683.333ENSCPBG00000026060-8783.333Chrysemys_picta_bellii
ENSLOCG00000000796pabpn15866.871ENSCING00000012468-8463.000Ciona_intestinalis
ENSLOCG00000000796pabpn16485.955ENSCANG00000009750BCL2L2-PABPN18783.974Colobus_angolensis_palliatus
ENSLOCG00000000796pabpn16673.118ENSCANG00000030980-8464.082Colobus_angolensis_palliatus
ENSLOCG00000000796pabpn16983.505ENSCGRG00001019696Pabpn18783.333Cricetulus_griseus_chok1gshd
ENSLOCG00000000796pabpn15392.517ENSCGRG00000011102Pabpn19192.517Cricetulus_griseus_crigri
ENSLOCG00000000796pabpn18490.795ENSCSEG00000008774pabpn19792.342Cynoglossus_semilaevis
ENSLOCG00000000796pabpn110086.780ENSCVAG00000003152pabpn110087.458Cyprinodon_variegatus
ENSLOCG00000000796pabpn110093.333ENSDARG00000045373pabpn19996.313Danio_rerio
ENSLOCG00000000796pabpn16256.805ENSDARG00000087996pabpn1l8659.864Danio_rerio
ENSLOCG00000000796pabpn16984.021ENSDNOG00000023682PABPN18271.032Dasypus_novemcinctus
ENSLOCG00000000796pabpn16983.505ENSDORG00000028966-8270.238Dipodomys_ordii
ENSLOCG00000000796pabpn18058.929FBgn0005648Pabp29758.929Drosophila_melanogaster
ENSLOCG00000000796pabpn17276.961ENSEBUG00000002322pabpn18576.961Eptatretus_burgeri
ENSLOCG00000000796pabpn16984.021ENSEASG00005011716PABPN18271.032Equus_asinus_asinus
ENSLOCG00000000796pabpn16984.103ENSECAG00000011652PABPN18571.146Equus_caballus
ENSLOCG00000000796pabpn17378.365ENSEEUG00000012973-7178.365Erinaceus_europaeus
ENSLOCG00000000796pabpn17793.088ENSELUG00000022654pabpn19593.333Esox_lucius
ENSLOCG00000000796pabpn16984.021ENSFCAG00000031922PABPN18271.032Felis_catus
ENSLOCG00000000796pabpn15683.333ENSFDAG00000018381BCL2L2-PABPN18783.333Fukomys_damarensis
ENSLOCG00000000796pabpn17792.925ENSFHEG00000007215pabpn19593.182Fundulus_heteroclitus
ENSLOCG00000000796pabpn110089.510ENSGMOG00000003922pabpn110091.259Gadus_morhua
ENSLOCG00000000796pabpn16382.584ENSGALG00000052930-5782.990Gallus_gallus
ENSLOCG00000000796pabpn17790.698ENSGAFG00000017099pabpn19593.722Gambusia_affinis
ENSLOCG00000000796pabpn110091.579ENSGACG00000002167pabpn110092.982Gasterosteus_aculeatus
ENSLOCG00000000796pabpn16984.021ENSGGOG00000022683-7977.679Gorilla_gorilla
ENSLOCG00000000796pabpn16972.959ENSGGOG00000025919-9070.803Gorilla_gorilla
ENSLOCG00000000796pabpn17269.849ENSGGOG00000039675-8766.087Gorilla_gorilla
ENSLOCG00000000796pabpn17793.868ENSHBUG00000019523pabpn19594.091Haplochromis_burtoni
ENSLOCG00000000796pabpn16973.711ENSHGLG00000018588-6972.589Heterocephalus_glaber_female
ENSLOCG00000000796pabpn16983.505ENSHGLG00000002927-9292.517Heterocephalus_glaber_female
ENSLOCG00000000796pabpn15566.013ENSHGLG00000009842-8766.013Heterocephalus_glaber_female
ENSLOCG00000000796pabpn16485.393ENSHGLG00100006673-9292.517Heterocephalus_glaber_male
ENSLOCG00000000796pabpn17072.589ENSHGLG00100015565-8663.445Heterocephalus_glaber_male
ENSLOCG00000000796pabpn17793.396ENSHCOG00000004655pabpn19593.636Hippocampus_comes
ENSLOCG00000000796pabpn110086.007ENSIPUG00000008085PABPN19594.545Ictalurus_punctatus
ENSLOCG00000000796pabpn17788.679ENSIPUG00000000180-9489.091Ictalurus_punctatus
ENSLOCG00000000796pabpn15683.974ENSSTOG00000029847BCL2L2-PABPN18783.974Ictidomys_tridecemlineatus
ENSLOCG00000000796pabpn15683.974ENSJJAG00000023507Gm205218783.974Jaculus_jaculus
ENSLOCG00000000796pabpn110091.259ENSKMAG00000018748pabpn110090.909Kryptolebias_marmoratus
ENSLOCG00000000796pabpn110092.982ENSLBEG00000027266pabpn110092.632Labrus_bergylta
ENSLOCG00000000796pabpn16488.764ENSLACG00000000646pabpn19478.182Latimeria_chalumnae
ENSLOCG00000000796pabpn15184.286ENSLAFG00000031227-9284.286Loxodonta_africana
ENSLOCG00000000796pabpn16485.955ENSMFAG00000032183BCL2L2-PABPN18783.974Macaca_fascicularis
ENSLOCG00000000796pabpn17874.537ENSMMUG00000014747BCL2L2-PABPN19283.704Macaca_mulatta
ENSLOCG00000000796pabpn16868.394ENSMMUG00000048382-6568.687Macaca_mulatta
ENSLOCG00000000796pabpn16369.143ENSMNEG00000035750-9075.385Macaca_nemestrina
ENSLOCG00000000796pabpn16984.021ENSMNEG00000045065BCL2L2-PABPN17977.679Macaca_nemestrina
ENSLOCG00000000796pabpn15566.879ENSMLEG00000034623-9274.242Mandrillus_leucophaeus
ENSLOCG00000000796pabpn16485.955ENSMLEG00000043862BCL2L2-PABPN18783.974Mandrillus_leucophaeus
ENSLOCG00000000796pabpn110091.930ENSMAMG00000007979pabpn110091.579Mastacembelus_armatus
ENSLOCG00000000796pabpn110092.281ENSMZEG00005011904pabpn110091.930Maylandia_zebra
ENSLOCG00000000796pabpn16983.505ENSMAUG00000007383Gm205218370.850Mesocricetus_auratus
ENSLOCG00000000796pabpn18077.679ENSMICG00000010002BCL2L2-PABPN17978.571Microcebus_murinus
ENSLOCG00000000796pabpn16983.505ENSMOCG00000018557Gm205219092.517Microtus_ochrogaster
ENSLOCG00000000796pabpn110092.632ENSMMOG00000005405pabpn110092.281Mola_mola
ENSLOCG00000000796pabpn16984.021ENSMODG00000004535-8271.429Monodelphis_domestica
ENSLOCG00000000796pabpn110092.281ENSMALG00000019612pabpn110091.930Monopterus_albus
ENSLOCG00000000796pabpn16982.474MGP_CAROLIEiJ_G0019277Pabpn19091.837Mus_caroli
ENSLOCG00000000796pabpn17971.493MGP_CAROLIEiJ_G0019276Gm205216671.493Mus_caroli
ENSLOCG00000000796pabpn17971.946ENSMUSG00000092232Gm205216671.946Mus_musculus
ENSLOCG00000000796pabpn16982.990ENSMUSG00000022194Pabpn19091.837Mus_musculus
ENSLOCG00000000796pabpn16982.990MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSLOCG00000000796pabpn17971.946MGP_PahariEiJ_G0030294Gm205216671.946Mus_pahari
ENSLOCG00000000796pabpn16982.990MGP_SPRETEiJ_G0020166Pabpn19091.837Mus_spretus
ENSLOCG00000000796pabpn17971.946MGP_SPRETEiJ_G0020165Gm205216671.946Mus_spretus
ENSLOCG00000000796pabpn15683.974ENSMPUG00000006775-9283.974Mustela_putorius_furo
ENSLOCG00000000796pabpn16781.720ENSMLUG00000028677-8073.684Myotis_lucifugus
ENSLOCG00000000796pabpn16483.708ENSMLUG00000003800-9483.708Myotis_lucifugus
ENSLOCG00000000796pabpn16680.749ENSMLUG00000012452-6579.798Myotis_lucifugus
ENSLOCG00000000796pabpn17972.851ENSNGAG00000019529Gm205215385.955Nannospalax_galili
ENSLOCG00000000796pabpn110092.632ENSNBRG00000023955pabpn110092.281Neolamprologus_brichardi
ENSLOCG00000000796pabpn16984.021ENSNLEG00000015007-7083.756Nomascus_leucogenys
ENSLOCG00000000796pabpn16969.948ENSNLEG00000030598-7269.898Nomascus_leucogenys
ENSLOCG00000000796pabpn16983.505ENSODEG00000002083BCL2L2-PABPN18270.635Octodon_degus
ENSLOCG00000000796pabpn15875.460ENSODEG00000011555-8174.342Octodon_degus
ENSLOCG00000000796pabpn16974.346ENSODEG00000003739-8364.315Octodon_degus
ENSLOCG00000000796pabpn110092.632ENSONIG00000008112pabpn110092.281Oreochromis_niloticus
ENSLOCG00000000796pabpn16983.505ENSOCUG00000016174PABPN19070.445Oryctolagus_cuniculus
ENSLOCG00000000796pabpn110091.579ENSORLG00000027900pabpn110091.228Oryzias_latipes
ENSLOCG00000000796pabpn110089.078ENSORLG00020004681pabpn110088.737Oryzias_latipes_hni
ENSLOCG00000000796pabpn110089.078ENSORLG00015000018pabpn110088.737Oryzias_latipes_hsok
ENSLOCG00000000796pabpn110091.930ENSOMEG00000016618pabpn110091.579Oryzias_melastigma
ENSLOCG00000000796pabpn16984.021ENSOGAG00000008710PABPN18271.032Otolemur_garnettii
ENSLOCG00000000796pabpn15767.949ENSPPAG00000039421-8767.949Pan_paniscus
ENSLOCG00000000796pabpn16485.955ENSPPAG00000028984BCL2L2-PABPN19283.974Pan_paniscus
ENSLOCG00000000796pabpn16984.021ENSPPRG00000010567PABPN18271.032Panthera_pardus
ENSLOCG00000000796pabpn15683.974ENSPTIG00000001063BCL2L2-PABPN18783.974Panthera_tigris_altaica
ENSLOCG00000000796pabpn16984.021ENSPTRG00000006167BCL2L27977.679Pan_troglodytes
ENSLOCG00000000796pabpn18163.677ENSPTRG00000047273-8961.157Pan_troglodytes
ENSLOCG00000000796pabpn16769.892ENSPANG00000023326-9076.154Papio_anubis
ENSLOCG00000000796pabpn16984.021ENSPANG00000021100BCL2L2-PABPN17977.679Papio_anubis
ENSLOCG00000000796pabpn110093.333ENSPKIG00000008144-10092.982Paramormyrops_kingsleyae
ENSLOCG00000000796pabpn15871.250ENSPKIG00000008340pabpn1l8667.222Paramormyrops_kingsleyae
ENSLOCG00000000796pabpn110090.210ENSPKIG00000018052pabpn110091.958Paramormyrops_kingsleyae
ENSLOCG00000000796pabpn110087.719ENSPMGG00000022027pabpn110087.368Periophthalmus_magnuspinnatus
ENSLOCG00000000796pabpn16983.505ENSPEMG00000008332Gm205218992.517Peromyscus_maniculatus_bairdii
ENSLOCG00000000796pabpn16776.757ENSPMAG00000006212pabpn19469.957Petromyzon_marinus
ENSLOCG00000000796pabpn16984.021ENSPCIG00000027751-8271.429Phascolarctos_cinereus
ENSLOCG00000000796pabpn110087.119ENSPFOG00000010351pabpn110088.176Poecilia_formosa
ENSLOCG00000000796pabpn110089.583ENSPLAG00000022696pabpn110091.319Poecilia_latipinna
ENSLOCG00000000796pabpn17790.187ENSPMEG00000020856pabpn19592.377Poecilia_mexicana
ENSLOCG00000000796pabpn110089.895ENSPREG00000011278pabpn110090.972Poecilia_reticulata
ENSLOCG00000000796pabpn16984.021ENSPPYG00000005663PABPN18971.032Pongo_abelii
ENSLOCG00000000796pabpn16770.312ENSPCAG00000005902PABPN18460.400Procavia_capensis
ENSLOCG00000000796pabpn18077.679ENSPCOG00000028047BCL2L2-PABPN17978.571Propithecus_coquereli
ENSLOCG00000000796pabpn17082.234ENSPVAG00000005270PABPN18270.916Pteropus_vampyrus
ENSLOCG00000000796pabpn17793.868ENSPNYG00000013182pabpn19594.091Pundamilia_nyererei
ENSLOCG00000000796pabpn110093.706ENSPNAG00000023526pabpn110093.357Pygocentrus_nattereri
ENSLOCG00000000796pabpn15771.795ENSPNAG00000021666pabpn1l9466.154Pygocentrus_nattereri
ENSLOCG00000000796pabpn16983.505ENSRNOG00000042195Pabpn18170.850Rattus_norvegicus
ENSLOCG00000000796pabpn17072.821ENSRBIG00000039547-8163.374Rhinopithecus_bieti
ENSLOCG00000000796pabpn16676.471ENSRBIG00000042811-7976.471Rhinopithecus_bieti
ENSLOCG00000000796pabpn16485.955ENSRBIG00000040762BCL2L2-PABPN15585.955Rhinopithecus_bieti
ENSLOCG00000000796pabpn17072.821ENSRROG00000040409-7270.202Rhinopithecus_roxellana
ENSLOCG00000000796pabpn16485.955ENSRROG00000045535BCL2L2-PABPN18783.974Rhinopithecus_roxellana
ENSLOCG00000000796pabpn16969.154ENSRROG00000036409-8158.366Rhinopithecus_roxellana
ENSLOCG00000000796pabpn16480.105ENSSBOG00000026930BCL2L2-PABPN19283.974Saimiri_boliviensis_boliviensis
ENSLOCG00000000796pabpn18064.159ENSSHAG00000007707-9464.159Sarcophilus_harrisii
ENSLOCG00000000796pabpn16485.955ENSSHAG00000014841-8185.955Sarcophilus_harrisii
ENSLOCG00000000796pabpn17793.396ENSSFOG00015014718pabpn19593.636Scleropages_formosus
ENSLOCG00000000796pabpn16766.120ENSSFOG00015015833pabpn1l8467.935Scleropages_formosus
ENSLOCG00000000796pabpn110086.713ENSSFOG00015012565pabpn110086.364Scleropages_formosus
ENSLOCG00000000796pabpn110092.982ENSSMAG00000020157pabpn110092.632Scophthalmus_maximus
ENSLOCG00000000796pabpn110092.632ENSSDUG00000020582pabpn110092.281Seriola_dumerili
ENSLOCG00000000796pabpn17794.340ENSSLDG00000007118pabpn19594.545Seriola_lalandi_dorsalis
ENSLOCG00000000796pabpn15285.616ENSSPUG00000018308-8783.974Sphenodon_punctatus
ENSLOCG00000000796pabpn110092.308ENSSPAG00000021658pabpn110091.958Stegastes_partitus
ENSLOCG00000000796pabpn16984.021ENSSSCG00000002023PABPN18271.032Sus_scrofa
ENSLOCG00000000796pabpn16668.649ENSSSCG00000034805-7363.784Sus_scrofa
ENSLOCG00000000796pabpn110091.579ENSTRUG00000023664pabpn110091.228Takifugu_rubripes
ENSLOCG00000000796pabpn17393.532ENSTNIG00000005369pabpn19393.532Tetraodon_nigroviridis
ENSLOCG00000000796pabpn16984.021ENSUAMG00000024460PABPN18271.315Ursus_americanus
ENSLOCG00000000796pabpn16485.955ENSUMAG00000014288BCL2L2-PABPN15385.955Ursus_maritimus
ENSLOCG00000000796pabpn16485.955ENSVVUG00000019912BCL2L2-PABPN17184.615Vulpes_vulpes
ENSLOCG00000000796pabpn16686.413ENSXETG00000014597pabpn16982.843Xenopus_tropicalis
ENSLOCG00000000796pabpn15580.921ENSXCOG00000005158pabpn18294.326Xiphophorus_couchianus
ENSLOCG00000000796pabpn110087.797ENSXMAG00000006196pabpn110088.851Xiphophorus_maculatus

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