EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000000801 (Gene tree)
Gene ID: 102693848
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 10908 bases
Position: chrLG19:1613624-1624531
Accession: 102693848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000892	SMN	PF06003.12	9.1e-36	1	1
ENSLOCP00000000916	SMN	PF06003.12	1.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000896	-	5873	-	ENSLOCP00000000892	303 (aa)	-	W5LXN5
ENSLOCT00000000920	-	5864	XM_006639910	ENSLOCP00000000916	282 (aa)	XP_015221302	W5LXQ9

Gene Model

Click here to download ENSLOCG00000000801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000801	-	69	30.435	ENSAPOG00000012753	-	74	59.184	Acanthochromis_polyacanthus
ENSLOCG00000000801	-	81	30.451	ENSACLG00000007308	smn1	92	31.159	Astatotilapia_calliptera
ENSLOCG00000000801	-	85	30.851	ENSBTAG00000005743	SMN2	92	30.996	Bos_taurus
ENSLOCG00000000801	-	85	30.496	ENSCHIG00000015559	-	90	31.724	Capra_hircus
ENSLOCG00000000801	-	91	30.545	ENSCPBG00000010968	-	94	33.835	Chrysemys_picta_bellii
ENSLOCG00000000801	-	87	30.464	ENSCSEG00000015227	smn1	98	31.142	Cynoglossus_semilaevis
ENSLOCG00000000801	-	94	30.033	ENSCVAG00000007498	smn1	98	32.990	Cyprinodon_variegatus
ENSLOCG00000000801	-	96	30.032	ENSELUG00000018067	smn1	100	31.757	Esox_lucius
ENSLOCG00000000801	-	81	31.034	ENSFALG00000012320	-	89	34.109	Ficedula_albicollis
ENSLOCG00000000801	-	91	31.119	ENSFHEG00000018508	smn1	97	32.281	Fundulus_heteroclitus
ENSLOCG00000000801	-	87	31.884	ENSGALG00000002430	SMN	96	34.496	Gallus_gallus
ENSLOCG00000000801	-	94	30.450	ENSGAFG00000009501	smn1	97	32.979	Gambusia_affinis
ENSLOCG00000000801	-	91	38.519	ENSGAGG00000013639	-	93	40.000	Gopherus_agassizii
ENSLOCG00000000801	-	94	30.824	ENSHBUG00000013987	smn1	97	31.071	Haplochromis_burtoni
ENSLOCG00000000801	-	84	30.182	ENSHGLG00000001905	-	87	33.721	Heterocephalus_glaber_female
ENSLOCG00000000801	-	83	30.147	ENSHGLG00100018676	-	90	34.630	Heterocephalus_glaber_male
ENSLOCG00000000801	-	97	31.410	ENSIPUG00000012580	smn1	94	32.459	Ictalurus_punctatus
ENSLOCG00000000801	-	81	31.008	ENSKMAG00000007239	smn1	98	31.724	Kryptolebias_marmoratus
ENSLOCG00000000801	-	94	31.834	ENSLBEG00000022550	smn1	98	31.818	Labrus_bergylta
ENSLOCG00000000801	-	91	30.164	ENSLACG00000009808	-	92	32.180	Latimeria_chalumnae
ENSLOCG00000000801	-	94	30.496	ENSMAMG00000011034	smn1	98	30.634	Mastacembelus_armatus
ENSLOCG00000000801	-	94	30.824	ENSMZEG00005013634	smn1	97	31.071	Maylandia_zebra
ENSLOCG00000000801	-	64	34.184	ENSMGAG00000008889	-	93	36.634	Meleagris_gallopavo
ENSLOCG00000000801	-	56	34.078	ENSMMOG00000005504	smn1	98	32.526	Mola_mola
ENSLOCG00000000801	-	98	30.690	ENSMALG00000008025	smn1	97	32.624	Monopterus_albus
ENSLOCG00000000801	-	82	30.830	ENSOPRG00000002015	-	97	32.576	Ochotona_princeps
ENSLOCG00000000801	-	90	31.159	ENSODEG00000015976	-	95	31.900	Octodon_degus
ENSLOCG00000000801	-	94	30.851	ENSONIG00000011799	smn1	97	31.095	Oreochromis_niloticus
ENSLOCG00000000801	-	94	30.405	ENSORLG00015022425	smn1	98	30.822	Oryzias_latipes_hsok
ENSLOCG00000000801	-	85	30.851	ENSOARG00000005425	-	97	30.996	Ovis_aries
ENSLOCG00000000801	-	87	31.868	ENSPMAG00000005004	smn1	89	31.868	Petromyzon_marinus
ENSLOCG00000000801	-	90	30.420	ENSPCIG00000025764	-	93	34.182	Phascolarctos_cinereus
ENSLOCG00000000801	-	94	30.903	ENSPFOG00000007786	smn1	98	30.952	Poecilia_formosa
ENSLOCG00000000801	-	94	31.250	ENSPLAG00000012071	smn1	98	31.293	Poecilia_latipinna
ENSLOCG00000000801	-	94	30.903	ENSPMEG00000017085	smn1	98	30.952	Poecilia_mexicana
ENSLOCG00000000801	-	94	30.903	ENSPREG00000005824	smn1	97	32.624	Poecilia_reticulata
ENSLOCG00000000801	-	90	30.070	ENSSHAG00000001499	-	96	32.841	Sarcophilus_harrisii
ENSLOCG00000000801	-	96	30.986	ENSSFOG00015015507	smn1	100	32.168	Scleropages_formosus
ENSLOCG00000000801	-	85	31.418	ENSSPUG00000000373	-	93	32.143	Sphenodon_punctatus
ENSLOCG00000000801	-	88	31.461	ENSTGUG00000001548	-	95	32.000	Taeniopygia_guttata
ENSLOCG00000000801	-	56	49.057	ENSXETG00000004912	-	82	49.057	Xenopus_tropicalis
ENSLOCG00000000801	-	95	30.928	ENSXETG00000018189	smn2	99	32.131	Xenopus_tropicalis
ENSLOCG00000000801	-	94	31.317	ENSXMAG00000001521	smn1	98	31.293	Xiphophorus_maculatus