EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000000854 (Gene tree)
Gene ID: 102682930
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4013 bases
Position: chrLG13:158289-162301
Accession: 102682930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000948	THUMP	PF02926.17	5.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000952	-	1322	XM_006636975	ENSLOCP00000000948	313 (aa)	XP_006637038	W5LXU1

Gene Model

Click here to download ENSLOCG00000000854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000854	thumpd1	95	58.784	ENSG00000066654	THUMPD1	77	60.498	Homo_sapiens
ENSLOCG00000000854	thumpd1	97	60.625	ENSAPOG00000008440	thumpd1	99	60.625	Acanthochromis_polyacanthus
ENSLOCG00000000854	thumpd1	83	63.359	ENSAMEG00000006257	THUMPD1	72	62.357	Ailuropoda_melanoleuca
ENSLOCG00000000854	thumpd1	83	67.939	ENSACIG00000024395	thumpd1	92	60.131	Amphilophus_citrinellus
ENSLOCG00000000854	thumpd1	97	59.062	ENSAOCG00000003509	thumpd1	99	59.062	Amphiprion_ocellaris
ENSLOCG00000000854	thumpd1	97	59.875	ENSAPEG00000010515	thumpd1	99	59.875	Amphiprion_percula
ENSLOCG00000000854	thumpd1	96	60.667	ENSATEG00000004737	thumpd1	93	60.667	Anabas_testudineus
ENSLOCG00000000854	thumpd1	81	65.476	ENSAPLG00000015259	THUMPD1	87	66.129	Anas_platyrhynchos
ENSLOCG00000000854	thumpd1	84	60.741	ENSACAG00000009625	-	85	62.222	Anolis_carolinensis
ENSLOCG00000000854	thumpd1	83	50.385	ENSANAG00000027311	-	71	49.615	Aotus_nancymaae
ENSLOCG00000000854	thumpd1	77	50.000	ENSANAG00000027040	-	65	48.221	Aotus_nancymaae
ENSLOCG00000000854	thumpd1	82	64.062	ENSANAG00000026882	-	68	65.574	Aotus_nancymaae
ENSLOCG00000000854	thumpd1	94	63.946	ENSACLG00000004830	thumpd1	99	61.250	Astatotilapia_calliptera
ENSLOCG00000000854	thumpd1	89	61.429	ENSAMXG00000012356	thumpd1	83	60.357	Astyanax_mexicanus
ENSLOCG00000000854	thumpd1	87	61.172	ENSBTAG00000047673	THUMPD1	76	60.440	Bos_taurus
ENSLOCG00000000854	thumpd1	95	57.770	ENSCJAG00000009499	THUMPD1	75	60.448	Callithrix_jacchus
ENSLOCG00000000854	thumpd1	83	62.595	ENSCAFG00000017985	THUMPD1	73	61.597	Canis_familiaris
ENSLOCG00000000854	thumpd1	83	62.595	ENSCAFG00020021861	THUMPD1	73	61.597	Canis_lupus_dingo
ENSLOCG00000000854	thumpd1	87	61.538	ENSCHIG00000010134	THUMPD1	76	60.806	Capra_hircus
ENSLOCG00000000854	thumpd1	95	59.122	ENSTSYG00000011537	THUMPD1	82	58.446	Carlito_syrichta
ENSLOCG00000000854	thumpd1	83	65.251	ENSCPOG00000008919	-	71	64.479	Cavia_porcellus
ENSLOCG00000000854	thumpd1	83	65.251	ENSCPOG00000023684	-	71	64.479	Cavia_porcellus
ENSLOCG00000000854	thumpd1	75	63.248	ENSCCAG00000019379	-	58	62.393	Cebus_capucinus
ENSLOCG00000000854	thumpd1	95	57.770	ENSCCAG00000030205	THUMPD1	80	57.732	Cebus_capucinus
ENSLOCG00000000854	thumpd1	95	58.446	ENSCATG00000040309	THUMPD1	77	60.142	Cercocebus_atys
ENSLOCG00000000854	thumpd1	80	54.475	ENSCATG00000020844	-	72	53.696	Cercocebus_atys
ENSLOCG00000000854	thumpd1	84	64.179	ENSCLAG00000016508	THUMPD1	75	63.433	Chinchilla_lanigera
ENSLOCG00000000854	thumpd1	95	58.446	ENSCSAG00000007610	THUMPD1	77	60.142	Chlorocebus_sabaeus
ENSLOCG00000000854	thumpd1	87	45.652	ENSCSAG00000009860	-	60	44.928	Chlorocebus_sabaeus
ENSLOCG00000000854	thumpd1	91	60.839	ENSCHOG00000005587	THUMPD1	76	60.140	Choloepus_hoffmanni
ENSLOCG00000000854	thumpd1	81	64.885	ENSCPBG00000019055	THUMPD1	73	66.023	Chrysemys_picta_bellii
ENSLOCG00000000854	thumpd1	87	52.399	ENSCANG00000038770	THUMPD1	73	58.108	Colobus_angolensis_palliatus
ENSLOCG00000000854	thumpd1	79	56.800	ENSCANG00000035822	-	81	56.000	Colobus_angolensis_palliatus
ENSLOCG00000000854	thumpd1	96	58.766	ENSCGRG00001014829	Thumpd1	86	58.117	Cricetulus_griseus_chok1gshd
ENSLOCG00000000854	thumpd1	96	58.766	ENSCGRG00000000060	Thumpd1	86	58.117	Cricetulus_griseus_crigri
ENSLOCG00000000854	thumpd1	95	57.792	ENSCSEG00000002041	thumpd1	98	57.792	Cynoglossus_semilaevis
ENSLOCG00000000854	thumpd1	85	68.914	ENSCVAG00000014960	thumpd1	92	62.662	Cyprinodon_variegatus
ENSLOCG00000000854	thumpd1	97	54.221	ENSDARG00000100264	thumpd1	88	53.896	Danio_rerio
ENSLOCG00000000854	thumpd1	94	58.844	ENSDNOG00000043510	THUMPD1	80	58.163	Dasypus_novemcinctus
ENSLOCG00000000854	thumpd1	84	62.082	ENSDORG00000028216	Thumpd1	75	62.082	Dipodomys_ordii
ENSLOCG00000000854	thumpd1	90	34.680	FBgn0035532	CG15014	90	33.446	Drosophila_melanogaster
ENSLOCG00000000854	thumpd1	80	59.839	ENSETEG00000002763	THUMPD1	58	59.761	Echinops_telfairi
ENSLOCG00000000854	thumpd1	81	42.424	ENSEBUG00000011011	THUMPD1	78	39.519	Eptatretus_burgeri
ENSLOCG00000000854	thumpd1	92	58.446	ENSECAG00000005354	THUMPD1	81	57.770	Equus_caballus
ENSLOCG00000000854	thumpd1	80	65.217	ENSEEUG00000011256	THUMPD1	61	62.934	Erinaceus_europaeus
ENSLOCG00000000854	thumpd1	86	68.266	ENSELUG00000013612	thumpd1	64	67.528	Esox_lucius
ENSLOCG00000000854	thumpd1	87	61.818	ENSFCAG00000039296	THUMPD1	76	61.091	Felis_catus
ENSLOCG00000000854	thumpd1	75	65.812	ENSFALG00000014029	THUMPD1	90	62.800	Ficedula_albicollis
ENSLOCG00000000854	thumpd1	85	67.041	ENSFHEG00000013319	thumpd1	85	62.667	Fundulus_heteroclitus
ENSLOCG00000000854	thumpd1	82	68.726	ENSGMOG00000003369	thumpd1	81	68.340	Gadus_morhua
ENSLOCG00000000854	thumpd1	50	64.744	ENSGALG00000031384	-	71	64.744	Gallus_gallus
ENSLOCG00000000854	thumpd1	94	64.356	ENSGAFG00000011000	thumpd1	95	64.356	Gambusia_affinis
ENSLOCG00000000854	thumpd1	97	61.290	ENSGACG00000019511	thumpd1	93	60.390	Gasterosteus_aculeatus
ENSLOCG00000000854	thumpd1	78	66.667	ENSGAGG00000008225	THUMPD1	76	67.886	Gopherus_agassizii
ENSLOCG00000000854	thumpd1	58	58.470	ENSGGOG00000043232	-	60	57.377	Gorilla_gorilla
ENSLOCG00000000854	thumpd1	91	60.839	ENSGGOG00000005231	-	63	59.790	Gorilla_gorilla
ENSLOCG00000000854	thumpd1	94	63.605	ENSHBUG00000017996	thumpd1	99	60.938	Haplochromis_burtoni
ENSLOCG00000000854	thumpd1	80	67.068	ENSHGLG00000011001	-	69	66.265	Heterocephalus_glaber_female
ENSLOCG00000000854	thumpd1	80	67.470	ENSHGLG00100016023	THUMPD1	67	67.623	Heterocephalus_glaber_male
ENSLOCG00000000854	thumpd1	75	61.603	ENSHCOG00000008618	thumpd1	54	60.944	Hippocampus_comes
ENSLOCG00000000854	thumpd1	75	64.103	ENSIPUG00000012500	thumpd1	60	60.000	Ictalurus_punctatus
ENSLOCG00000000854	thumpd1	83	64.479	ENSSTOG00000007011	THUMPD1	70	64.567	Ictidomys_tridecemlineatus
ENSLOCG00000000854	thumpd1	84	60.300	ENSJJAG00000004295	-	75	59.551	Jaculus_jaculus
ENSLOCG00000000854	thumpd1	81	56.250	ENSKMAG00000009545	thumpd1	75	50.814	Kryptolebias_marmoratus
ENSLOCG00000000854	thumpd1	94	61.775	ENSLBEG00000009349	thumpd1	89	61.824	Labrus_bergylta
ENSLOCG00000000854	thumpd1	81	65.233	ENSLACG00000005833	THUMPD1	77	63.929	Latimeria_chalumnae
ENSLOCG00000000854	thumpd1	91	60.627	ENSLAFG00000025838	THUMPD1	77	60.638	Loxodonta_africana
ENSLOCG00000000854	thumpd1	95	58.446	ENSMFAG00000036996	THUMPD1	77	60.142	Macaca_fascicularis
ENSLOCG00000000854	thumpd1	79	52.362	ENSMFAG00000041474	-	80	51.575	Macaca_fascicularis
ENSLOCG00000000854	thumpd1	95	58.446	ENSMMUG00000004225	THUMPD1	77	60.142	Macaca_mulatta
ENSLOCG00000000854	thumpd1	79	51.969	ENSMMUG00000038414	-	80	51.181	Macaca_mulatta
ENSLOCG00000000854	thumpd1	95	58.446	ENSMNEG00000020726	THUMPD1	77	60.142	Macaca_nemestrina
ENSLOCG00000000854	thumpd1	79	52.362	ENSMNEG00000038856	-	80	51.575	Macaca_nemestrina
ENSLOCG00000000854	thumpd1	95	58.446	ENSMLEG00000036436	THUMPD1	77	60.142	Mandrillus_leucophaeus
ENSLOCG00000000854	thumpd1	79	52.964	ENSMLEG00000030012	-	80	52.174	Mandrillus_leucophaeus
ENSLOCG00000000854	thumpd1	94	60.204	ENSMAMG00000006858	thumpd1	89	59.524	Mastacembelus_armatus
ENSLOCG00000000854	thumpd1	94	63.605	ENSMZEG00005013693	thumpd1	99	60.938	Maylandia_zebra
ENSLOCG00000000854	thumpd1	63	64.646	ENSMGAG00000010340	THUMPD1	95	64.286	Meleagris_gallopavo
ENSLOCG00000000854	thumpd1	97	57.742	ENSMAUG00000013306	Thumpd1	85	57.097	Mesocricetus_auratus
ENSLOCG00000000854	thumpd1	85	62.222	ENSMICG00000038483	-	75	61.255	Microcebus_murinus
ENSLOCG00000000854	thumpd1	71	55.405	ENSMICG00000030865	-	63	54.505	Microcebus_murinus
ENSLOCG00000000854	thumpd1	92	60.606	ENSMOCG00000003447	Thumpd1	83	59.933	Microtus_ochrogaster
ENSLOCG00000000854	thumpd1	86	64.234	ENSMMOG00000011323	thumpd1	81	63.504	Mola_mola
ENSLOCG00000000854	thumpd1	88	60.900	ENSMODG00000006971	-	77	60.208	Monodelphis_domestica
ENSLOCG00000000854	thumpd1	80	66.265	ENSMODG00000024776	-	78	60.554	Monodelphis_domestica
ENSLOCG00000000854	thumpd1	85	66.541	ENSMALG00000019522	thumpd1	84	66.920	Monopterus_albus
ENSLOCG00000000854	thumpd1	84	64.552	MGP_CAROLIEiJ_G0030382	Thumpd1	75	64.179	Mus_caroli
ENSLOCG00000000854	thumpd1	84	64.925	ENSMUSG00000030942	Thumpd1	75	64.179	Mus_musculus
ENSLOCG00000000854	thumpd1	95	57.585	MGP_PahariEiJ_G0013593	Thumpd1	91	57.585	Mus_pahari
ENSLOCG00000000854	thumpd1	81	65.748	ENSMLUG00000010547	THUMPD1	76	61.397	Myotis_lucifugus
ENSLOCG00000000854	thumpd1	84	63.806	ENSNGAG00000018643	Thumpd1	74	63.060	Nannospalax_galili
ENSLOCG00000000854	thumpd1	94	63.605	ENSNBRG00000006987	thumpd1	92	61.076	Neolamprologus_brichardi
ENSLOCG00000000854	thumpd1	95	59.122	ENSNLEG00000012369	THUMPD1	80	58.763	Nomascus_leucogenys
ENSLOCG00000000854	thumpd1	69	80.488	ENSOPRG00000011342	THUMPD1	53	80.488	Ochotona_princeps
ENSLOCG00000000854	thumpd1	78	66.939	ENSODEG00000012360	THUMPD1	69	66.122	Octodon_degus
ENSLOCG00000000854	thumpd1	87	66.788	ENSONIG00000000146	thumpd1	96	66.788	Oreochromis_niloticus
ENSLOCG00000000854	thumpd1	95	55.521	ENSOANG00000014297	THUMPD1	87	55.205	Ornithorhynchus_anatinus
ENSLOCG00000000854	thumpd1	89	60.072	ENSOCUG00000009895	-	78	59.353	Oryctolagus_cuniculus
ENSLOCG00000000854	thumpd1	57	56.906	ENSOCUG00000025354	-	83	56.906	Oryctolagus_cuniculus
ENSLOCG00000000854	thumpd1	84	65.660	ENSORLG00000027557	thumpd1	85	65.283	Oryzias_latipes
ENSLOCG00000000854	thumpd1	84	65.660	ENSORLG00020010206	thumpd1	85	65.660	Oryzias_latipes_hni
ENSLOCG00000000854	thumpd1	84	65.283	ENSORLG00015009581	thumpd1	85	65.283	Oryzias_latipes_hsok
ENSLOCG00000000854	thumpd1	85	65.169	ENSOMEG00000019361	thumpd1	80	65.169	Oryzias_melastigma
ENSLOCG00000000854	thumpd1	84	62.687	ENSOGAG00000026723	THUMPD1	75	61.940	Otolemur_garnettii
ENSLOCG00000000854	thumpd1	87	61.538	ENSOARG00000013107	THUMPD1	75	60.806	Ovis_aries
ENSLOCG00000000854	thumpd1	91	60.490	ENSPPAG00000033818	-	63	59.790	Pan_paniscus
ENSLOCG00000000854	thumpd1	86	51.481	ENSPPAG00000001653	-	77	50.741	Pan_paniscus
ENSLOCG00000000854	thumpd1	83	63.740	ENSPPRG00000014118	-	73	62.738	Panthera_pardus
ENSLOCG00000000854	thumpd1	83	63.359	ENSPTIG00000013856	-	73	62.357	Panthera_tigris_altaica
ENSLOCG00000000854	thumpd1	83	49.615	ENSPTRG00000046073	-	72	51.037	Pan_troglodytes
ENSLOCG00000000854	thumpd1	91	60.140	ENSPTRG00000007848	THUMPD1	63	59.441	Pan_troglodytes
ENSLOCG00000000854	thumpd1	95	58.446	ENSPANG00000025507	THUMPD1	77	60.142	Papio_anubis
ENSLOCG00000000854	thumpd1	79	52.756	ENSPANG00000034881	-	80	51.969	Papio_anubis
ENSLOCG00000000854	thumpd1	96	65.161	ENSPKIG00000014491	thumpd1	83	70.370	Paramormyrops_kingsleyae
ENSLOCG00000000854	thumpd1	86	63.370	ENSPSIG00000012430	THUMPD1	93	62.637	Pelodiscus_sinensis
ENSLOCG00000000854	thumpd1	83	65.649	ENSPMGG00000014479	thumpd1	90	66.797	Periophthalmus_magnuspinnatus
ENSLOCG00000000854	thumpd1	62	42.466	ENSPEMG00000002608	-	92	42.922	Peromyscus_maniculatus_bairdii
ENSLOCG00000000854	thumpd1	70	45.205	ENSPMAG00000001389	thumpd1	94	43.902	Petromyzon_marinus
ENSLOCG00000000854	thumpd1	89	60.825	ENSPCIG00000029241	THUMPD1	57	60.137	Phascolarctos_cinereus
ENSLOCG00000000854	thumpd1	97	62.215	ENSPFOG00000012649	thumpd1	91	62.215	Poecilia_formosa
ENSLOCG00000000854	thumpd1	97	62.092	ENSPLAG00000000137	thumpd1	91	62.092	Poecilia_latipinna
ENSLOCG00000000854	thumpd1	97	62.418	ENSPMEG00000007750	thumpd1	91	62.418	Poecilia_mexicana
ENSLOCG00000000854	thumpd1	91	65.972	ENSPREG00000000144	thumpd1	97	65.972	Poecilia_reticulata
ENSLOCG00000000854	thumpd1	74	58.442	ENSPPYG00000007160	-	76	60.377	Pongo_abelii
ENSLOCG00000000854	thumpd1	66	60.870	ENSPCAG00000001534	THUMPD1	67	62.963	Procavia_capensis
ENSLOCG00000000854	thumpd1	85	62.593	ENSPCOG00000024663	THUMPD1	75	61.624	Propithecus_coquereli
ENSLOCG00000000854	thumpd1	89	58.065	ENSPVAG00000005659	-	77	57.348	Pteropus_vampyrus
ENSLOCG00000000854	thumpd1	94	63.605	ENSPNYG00000007061	thumpd1	98	60.559	Pundamilia_nyererei
ENSLOCG00000000854	thumpd1	92	63.415	ENSPNAG00000024872	thumpd1	94	63.066	Pygocentrus_nattereri
ENSLOCG00000000854	thumpd1	58	55.941	ENSRNOG00000014946	AABR07005588.1	92	55.941	Rattus_norvegicus
ENSLOCG00000000854	thumpd1	87	54.212	ENSRBIG00000040136	-	75	61.333	Rhinopithecus_bieti
ENSLOCG00000000854	thumpd1	93	59.107	ENSRBIG00000040752	THUMPD1	77	60.142	Rhinopithecus_bieti
ENSLOCG00000000854	thumpd1	87	53.737	ENSRROG00000045699	-	94	53.025	Rhinopithecus_roxellana
ENSLOCG00000000854	thumpd1	93	59.107	ENSRROG00000042189	THUMPD1	77	60.142	Rhinopithecus_roxellana
ENSLOCG00000000854	thumpd1	96	56.536	ENSSBOG00000034246	THUMPD1	84	56.209	Saimiri_boliviensis_boliviensis
ENSLOCG00000000854	thumpd1	80	66.135	ENSSHAG00000003853	THUMPD1	76	62.182	Sarcophilus_harrisii
ENSLOCG00000000854	thumpd1	87	59.220	ENSSFOG00015007512	thumpd1	91	56.209	Scleropages_formosus
ENSLOCG00000000854	thumpd1	96	59.105	ENSSMAG00000000723	thumpd1	93	59.105	Scophthalmus_maximus
ENSLOCG00000000854	thumpd1	87	66.788	ENSSDUG00000014502	thumpd1	82	68.821	Seriola_dumerili
ENSLOCG00000000854	thumpd1	87	67.153	ENSSLDG00000007694	thumpd1	82	69.202	Seriola_lalandi_dorsalis
ENSLOCG00000000854	thumpd1	86	64.234	ENSSPUG00000005096	THUMPD1	99	57.542	Sphenodon_punctatus
ENSLOCG00000000854	thumpd1	87	66.788	ENSSPAG00000006993	thumpd1	86	66.788	Stegastes_partitus
ENSLOCG00000000854	thumpd1	87	61.172	ENSSSCG00000024748	THUMPD1	76	60.806	Sus_scrofa
ENSLOCG00000000854	thumpd1	85	63.910	ENSTGUG00000009247	THUMPD1	96	63.910	Taeniopygia_guttata
ENSLOCG00000000854	thumpd1	95	63.487	ENSTRUG00000015656	thumpd1	93	63.158	Takifugu_rubripes
ENSLOCG00000000854	thumpd1	94	63.211	ENSTNIG00000001584	thumpd1	97	61.873	Tetraodon_nigroviridis
ENSLOCG00000000854	thumpd1	79	65.992	ENSTBEG00000005252	THUMPD1	61	65.306	Tupaia_belangeri
ENSLOCG00000000854	thumpd1	87	60.806	ENSTTRG00000016435	THUMPD1	76	60.440	Tursiops_truncatus
ENSLOCG00000000854	thumpd1	55	50.289	ENSUAMG00000005779	-	75	50.289	Ursus_americanus
ENSLOCG00000000854	thumpd1	91	57.705	ENSVPAG00000003422	THUMPD1	86	57.377	Vicugna_pacos
ENSLOCG00000000854	thumpd1	83	62.595	ENSVVUG00000023241	THUMPD1	73	61.597	Vulpes_vulpes
ENSLOCG00000000854	thumpd1	85	51.880	ENSXETG00000005539	thumpd1	64	65.054	Xenopus_tropicalis
ENSLOCG00000000854	thumpd1	86	68.030	ENSXMAG00000026052	thumpd1	91	62.092	Xiphophorus_maculatus