EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000885 (Gene tree)
Gene ID: 102687386
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 3362 bases
Position: chrLG21:194624-197985
Accession: 102687386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000984	TruB_N	PF01509.18	3.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000988	-	909	XM_006640552	ENSLOCP00000000984	303 (aa)	XP_006640615	W5LXX7

Gene Model

Click here to download ENSLOCG00000000885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000885	trub2	66	34.328	ENSLOCG00000012979	trub1	67	34.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000885	trub2	95	60.481	ENSG00000167112	TRUB2	87	60.481	Homo_sapiens
ENSLOCG00000000885	trub2	68	65.534	ENSAPOG00000015733	trub2	75	65.534	Acanthochromis_polyacanthus
ENSLOCG00000000885	trub2	95	47.931	ENSAPOG00000018284	-	80	67.939	Acanthochromis_polyacanthus
ENSLOCG00000000885	trub2	50	58.667	ENSAPOG00000018216	-	72	58.667	Acanthochromis_polyacanthus
ENSLOCG00000000885	trub2	98	58.923	ENSAMEG00000015395	TRUB2	89	58.923	Ailuropoda_melanoleuca
ENSLOCG00000000885	trub2	95	59.375	ENSACIG00000016500	trub2	87	59.375	Amphilophus_citrinellus
ENSLOCG00000000885	trub2	95	60.690	ENSAOCG00000002330	trub2	85	60.690	Amphiprion_ocellaris
ENSLOCG00000000885	trub2	95	61.379	ENSAPEG00000013177	trub2	85	61.379	Amphiprion_percula
ENSLOCG00000000885	trub2	96	62.543	ENSATEG00000011371	trub2	91	62.543	Anabas_testudineus
ENSLOCG00000000885	trub2	95	55.137	ENSAPLG00000009254	TRUB2	94	55.479	Anas_platyrhynchos
ENSLOCG00000000885	trub2	94	62.456	ENSACAG00000007331	TRUB2	87	62.456	Anolis_carolinensis
ENSLOCG00000000885	trub2	95	60.825	ENSANAG00000036234	TRUB2	93	60.825	Aotus_nancymaae
ENSLOCG00000000885	trub2	95	60.208	ENSACLG00000010793	trub2	87	60.208	Astatotilapia_calliptera
ENSLOCG00000000885	trub2	95	64.236	ENSAMXG00000031679	trub2	82	64.236	Astyanax_mexicanus
ENSLOCG00000000885	trub2	95	60.137	ENSCJAG00000020009	TRUB2	87	60.137	Callithrix_jacchus
ENSLOCG00000000885	trub2	95	60.137	ENSCAFG00000020068	TRUB2	88	60.137	Canis_familiaris
ENSLOCG00000000885	trub2	56	60.465	ENSCAFG00020017325	-	95	60.465	Canis_lupus_dingo
ENSLOCG00000000885	trub2	95	60.137	ENSCHIG00000021160	TRUB2	87	60.137	Capra_hircus
ENSLOCG00000000885	trub2	99	58.416	ENSTSYG00000034163	TRUB2	89	58.416	Carlito_syrichta
ENSLOCG00000000885	trub2	86	57.252	ENSCAPG00000000223	TRUB2	89	56.643	Cavia_aperea
ENSLOCG00000000885	trub2	95	58.419	ENSCPOG00000013535	TRUB2	87	58.721	Cavia_porcellus
ENSLOCG00000000885	trub2	95	60.481	ENSCCAG00000026531	-	88	60.481	Cebus_capucinus
ENSLOCG00000000885	trub2	95	57.388	ENSCCAG00000028463	-	87	57.388	Cebus_capucinus
ENSLOCG00000000885	trub2	95	60.825	ENSCATG00000038234	TRUB2	87	60.825	Cercocebus_atys
ENSLOCG00000000885	trub2	96	58.904	ENSCLAG00000001702	TRUB2	87	61.047	Chinchilla_lanigera
ENSLOCG00000000885	trub2	95	57.192	ENSCSAG00000014117	TRUB2	87	57.192	Chlorocebus_sabaeus
ENSLOCG00000000885	trub2	96	57.586	ENSCHOG00000001555	TRUB2	87	57.586	Choloepus_hoffmanni
ENSLOCG00000000885	trub2	99	60.535	ENSCPBG00000025186	TRUB2	87	60.535	Chrysemys_picta_bellii
ENSLOCG00000000885	trub2	86	39.245	ENSCSAVG00000003930	-	81	39.245	Ciona_savignyi
ENSLOCG00000000885	trub2	96	53.741	ENSCANG00000016135	TRUB2	87	53.741	Colobus_angolensis_palliatus
ENSLOCG00000000885	trub2	95	57.388	ENSCGRG00001024441	Trub2	91	56.977	Cricetulus_griseus_chok1gshd
ENSLOCG00000000885	trub2	95	57.388	ENSCGRG00000005633	Trub2	87	57.388	Cricetulus_griseus_crigri
ENSLOCG00000000885	trub2	95	61.379	ENSCSEG00000001331	trub2	86	61.379	Cynoglossus_semilaevis
ENSLOCG00000000885	trub2	95	61.724	ENSCVAG00000009901	trub2	86	61.724	Cyprinodon_variegatus
ENSLOCG00000000885	trub2	98	61.667	ENSDARG00000028379	trub2	85	61.667	Danio_rerio
ENSLOCG00000000885	trub2	96	59.727	ENSDNOG00000045679	-	87	59.727	Dasypus_novemcinctus
ENSLOCG00000000885	trub2	87	41.288	ENSDNOG00000043967	-	81	41.288	Dasypus_novemcinctus
ENSLOCG00000000885	trub2	95	58.966	ENSDORG00000016222	Trub2	91	58.966	Dipodomys_ordii
ENSLOCG00000000885	trub2	96	34.576	FBgn0033060	CG7849	92	34.576	Drosophila_melanogaster
ENSLOCG00000000885	trub2	99	58.416	ENSETEG00000009114	TRUB2	92	58.416	Echinops_telfairi
ENSLOCG00000000885	trub2	73	43.478	ENSEBUG00000015723	trub2	81	43.478	Eptatretus_burgeri
ENSLOCG00000000885	trub2	95	60.137	ENSEASG00005016819	TRUB2	87	60.137	Equus_asinus_asinus
ENSLOCG00000000885	trub2	95	60.137	ENSECAG00000023520	TRUB2	87	60.137	Equus_caballus
ENSLOCG00000000885	trub2	95	58.763	ENSEEUG00000008908	TRUB2	88	58.763	Erinaceus_europaeus
ENSLOCG00000000885	trub2	95	64.238	ENSELUG00000002376	trub2	94	64.238	Esox_lucius
ENSLOCG00000000885	trub2	95	59.450	ENSFCAG00000005839	TRUB2	90	59.450	Felis_catus
ENSLOCG00000000885	trub2	87	60.076	ENSFALG00000001364	TRUB2	84	60.076	Ficedula_albicollis
ENSLOCG00000000885	trub2	96	59.310	ENSFDAG00000021374	TRUB2	87	60.588	Fukomys_damarensis
ENSLOCG00000000885	trub2	95	57.586	ENSFHEG00000014655	trub2	85	57.586	Fundulus_heteroclitus
ENSLOCG00000000885	trub2	98	49.832	ENSGMOG00000000981	trub2	99	49.832	Gadus_morhua
ENSLOCG00000000885	trub2	95	61.324	ENSGALG00000004920	TRUB2	70	61.111	Gallus_gallus
ENSLOCG00000000885	trub2	95	61.458	ENSGAFG00000010107	trub2	86	61.246	Gambusia_affinis
ENSLOCG00000000885	trub2	98	61.409	ENSGACG00000001476	trub2	89	61.409	Gasterosteus_aculeatus
ENSLOCG00000000885	trub2	96	61.379	ENSGAGG00000022872	TRUB2	86	61.379	Gopherus_agassizii
ENSLOCG00000000885	trub2	95	60.481	ENSGGOG00000014780	TRUB2	87	60.481	Gorilla_gorilla
ENSLOCG00000000885	trub2	95	60.900	ENSHBUG00000022384	trub2	87	60.900	Haplochromis_burtoni
ENSLOCG00000000885	trub2	95	58.763	ENSHGLG00000016715	TRUB2	87	58.763	Heterocephalus_glaber_female
ENSLOCG00000000885	trub2	95	58.763	ENSHGLG00100016548	TRUB2	87	58.763	Heterocephalus_glaber_male
ENSLOCG00000000885	trub2	98	61.589	ENSHCOG00000017748	trub2	91	61.589	Hippocampus_comes
ENSLOCG00000000885	trub2	95	62.021	ENSIPUG00000017725	hdhd3	50	62.021	Ictalurus_punctatus
ENSLOCG00000000885	trub2	95	57.439	ENSSTOG00000022617	-	88	57.439	Ictidomys_tridecemlineatus
ENSLOCG00000000885	trub2	95	57.785	ENSSTOG00000008024	-	87	58.235	Ictidomys_tridecemlineatus
ENSLOCG00000000885	trub2	92	53.546	ENSJJAG00000019181	Trub2	83	53.546	Jaculus_jaculus
ENSLOCG00000000885	trub2	98	60.135	ENSKMAG00000007861	trub2	89	60.135	Kryptolebias_marmoratus
ENSLOCG00000000885	trub2	95	60.690	ENSLBEG00000000907	trub2	85	60.690	Labrus_bergylta
ENSLOCG00000000885	trub2	92	63.929	ENSLACG00000001515	TRUB2	83	63.929	Latimeria_chalumnae
ENSLOCG00000000885	trub2	99	57.475	ENSLAFG00000002174	TRUB2	98	57.475	Loxodonta_africana
ENSLOCG00000000885	trub2	95	61.168	ENSMFAG00000000881	TRUB2	87	61.168	Macaca_fascicularis
ENSLOCG00000000885	trub2	95	61.168	ENSMMUG00000014146	TRUB2	87	61.168	Macaca_mulatta
ENSLOCG00000000885	trub2	95	60.825	ENSMNEG00000011189	TRUB2	87	60.825	Macaca_nemestrina
ENSLOCG00000000885	trub2	95	61.168	ENSMLEG00000037270	TRUB2	87	61.168	Mandrillus_leucophaeus
ENSLOCG00000000885	trub2	95	60.900	ENSMAMG00000023643	trub2	95	60.900	Mastacembelus_armatus
ENSLOCG00000000885	trub2	95	60.554	ENSMZEG00005016018	trub2	87	60.554	Maylandia_zebra
ENSLOCG00000000885	trub2	65	61.224	ENSMGAG00000003894	TRUB2	98	61.224	Meleagris_gallopavo
ENSLOCG00000000885	trub2	95	57.732	ENSMAUG00000010403	Trub2	87	58.721	Mesocricetus_auratus
ENSLOCG00000000885	trub2	97	58.923	ENSMICG00000047032	TRUB2	89	58.923	Microcebus_murinus
ENSLOCG00000000885	trub2	96	57.192	ENSMOCG00000014291	Trub2	95	57.192	Microtus_ochrogaster
ENSLOCG00000000885	trub2	95	61.034	ENSMMOG00000021674	trub2	89	61.034	Mola_mola
ENSLOCG00000000885	trub2	99	56.856	ENSMODG00000005940	TRUB2	99	56.856	Monodelphis_domestica
ENSLOCG00000000885	trub2	98	61.667	ENSMALG00000021231	trub2	89	61.667	Monopterus_albus
ENSLOCG00000000885	trub2	95	55.670	MGP_CAROLIEiJ_G0023368	Trub2	87	55.814	Mus_caroli
ENSLOCG00000000885	trub2	96	55.822	ENSMUSG00000039826	Trub2	87	56.977	Mus_musculus
ENSLOCG00000000885	trub2	95	56.014	MGP_PahariEiJ_G0024826	Trub2	87	56.395	Mus_pahari
ENSLOCG00000000885	trub2	95	56.014	MGP_SPRETEiJ_G0024286	Trub2	87	56.977	Mus_spretus
ENSLOCG00000000885	trub2	99	56.478	ENSMPUG00000013206	TRUB2	82	56.478	Mustela_putorius_furo
ENSLOCG00000000885	trub2	99	58.882	ENSMLUG00000005256	TRUB2	89	58.882	Myotis_lucifugus
ENSLOCG00000000885	trub2	95	58.076	ENSNGAG00000018679	Trub2	88	58.076	Nannospalax_galili
ENSLOCG00000000885	trub2	95	60.900	ENSNBRG00000016294	trub2	87	60.900	Neolamprologus_brichardi
ENSLOCG00000000885	trub2	95	59.516	ENSNLEG00000017556	TRUB2	87	59.516	Nomascus_leucogenys
ENSLOCG00000000885	trub2	95	60.554	ENSMEUG00000000484	TRUB2	93	60.554	Notamacropus_eugenii
ENSLOCG00000000885	trub2	95	55.326	ENSOPRG00000001981	TRUB2	87	55.326	Ochotona_princeps
ENSLOCG00000000885	trub2	99	58.804	ENSODEG00000017292	TRUB2	91	58.804	Octodon_degus
ENSLOCG00000000885	trub2	95	59.375	ENSONIG00000004230	trub2	87	59.375	Oreochromis_niloticus
ENSLOCG00000000885	trub2	62	59.574	ENSOANG00000029023	-	83	59.574	Ornithorhynchus_anatinus
ENSLOCG00000000885	trub2	95	58.131	ENSOCUG00000026296	TRUB2	83	57.566	Oryctolagus_cuniculus
ENSLOCG00000000885	trub2	92	60.000	ENSORLG00000020011	trub2	84	60.000	Oryzias_latipes
ENSLOCG00000000885	trub2	92	59.574	ENSORLG00020011028	trub2	82	59.643	Oryzias_latipes_hni
ENSLOCG00000000885	trub2	92	59.574	ENSORLG00015007494	trub2	86	59.643	Oryzias_latipes_hsok
ENSLOCG00000000885	trub2	95	58.478	ENSOMEG00000006702	trub2	88	58.478	Oryzias_melastigma
ENSLOCG00000000885	trub2	66	61.500	ENSOARG00000003785	-	83	60.577	Ovis_aries
ENSLOCG00000000885	trub2	99	60.927	ENSOARG00000010579	-	89	60.927	Ovis_aries
ENSLOCG00000000885	trub2	95	61.168	ENSPPAG00000043146	TRUB2	87	61.168	Pan_paniscus
ENSLOCG00000000885	trub2	95	59.450	ENSPPRG00000006307	TRUB2	90	59.450	Panthera_pardus
ENSLOCG00000000885	trub2	95	59.794	ENSPTIG00000012366	TRUB2	90	59.794	Panthera_tigris_altaica
ENSLOCG00000000885	trub2	95	60.825	ENSPTRG00000052151	-	87	60.825	Pan_troglodytes
ENSLOCG00000000885	trub2	95	60.825	ENSPTRG00000021423	TRUB2	87	60.825	Pan_troglodytes
ENSLOCG00000000885	trub2	95	61.168	ENSPANG00000025856	TRUB2	87	61.168	Papio_anubis
ENSLOCG00000000885	trub2	98	65.993	ENSPKIG00000019769	trub2	97	65.993	Paramormyrops_kingsleyae
ENSLOCG00000000885	trub2	97	55.631	ENSPSIG00000015701	TRUB2	98	55.631	Pelodiscus_sinensis
ENSLOCG00000000885	trub2	98	60.133	ENSPMGG00000010206	trub2	94	60.133	Periophthalmus_magnuspinnatus
ENSLOCG00000000885	trub2	96	56.997	ENSPEMG00000017893	Trub2	91	57.803	Peromyscus_maniculatus_bairdii
ENSLOCG00000000885	trub2	96	61.034	ENSPCIG00000026731	TRUB2	93	61.034	Phascolarctos_cinereus
ENSLOCG00000000885	trub2	92	62.950	ENSPFOG00000018018	trub2	73	62.950	Poecilia_formosa
ENSLOCG00000000885	trub2	92	62.950	ENSPLAG00000010484	trub2	80	62.950	Poecilia_latipinna
ENSLOCG00000000885	trub2	95	60.900	ENSPMEG00000012913	trub2	86	60.900	Poecilia_mexicana
ENSLOCG00000000885	trub2	95	61.111	ENSPREG00000002549	trub2	86	60.900	Poecilia_reticulata
ENSLOCG00000000885	trub2	95	59.107	ENSPPYG00000019650	TRUB2	88	59.107	Pongo_abelii
ENSLOCG00000000885	trub2	95	59.794	ENSPCAG00000015068	TRUB2	88	59.794	Procavia_capensis
ENSLOCG00000000885	trub2	97	59.933	ENSPCOG00000017100	TRUB2	89	59.933	Propithecus_coquereli
ENSLOCG00000000885	trub2	90	59.489	ENSPVAG00000001224	TRUB2	91	59.489	Pteropus_vampyrus
ENSLOCG00000000885	trub2	95	60.554	ENSPNYG00000013666	trub2	87	60.554	Pundamilia_nyererei
ENSLOCG00000000885	trub2	97	65.085	ENSPNAG00000017292	trub2	84	65.085	Pygocentrus_nattereri
ENSLOCG00000000885	trub2	92	57.092	ENSRNOG00000043189	Trub2	86	57.092	Rattus_norvegicus
ENSLOCG00000000885	trub2	95	54.296	ENSRBIG00000006965	TRUB2	86	54.296	Rhinopithecus_bieti
ENSLOCG00000000885	trub2	95	59.794	ENSRROG00000042928	TRUB2	87	59.794	Rhinopithecus_roxellana
ENSLOCG00000000885	trub2	95	60.137	ENSSBOG00000022439	TRUB2	87	60.137	Saimiri_boliviensis_boliviensis
ENSLOCG00000000885	trub2	95	70.035	ENSSFOG00015013391	trub2	92	70.035	Scleropages_formosus
ENSLOCG00000000885	trub2	95	60.900	ENSSMAG00000020820	trub2	88	60.900	Scophthalmus_maximus
ENSLOCG00000000885	trub2	95	61.379	ENSSDUG00000016928	trub2	88	60.135	Seriola_dumerili
ENSLOCG00000000885	trub2	95	60.690	ENSSLDG00000024701	trub2	88	59.459	Seriola_lalandi_dorsalis
ENSLOCG00000000885	trub2	98	58.725	ENSSPUG00000015515	TRUB2	89	58.725	Sphenodon_punctatus
ENSLOCG00000000885	trub2	98	61.616	ENSSPAG00000017865	trub2	90	61.616	Stegastes_partitus
ENSLOCG00000000885	trub2	99	57.807	ENSSSCG00000005645	TRUB2	88	58.175	Sus_scrofa
ENSLOCG00000000885	trub2	86	60.769	ENSTGUG00000003704	TRUB2	99	60.769	Taeniopygia_guttata
ENSLOCG00000000885	trub2	95	58.276	ENSTRUG00000015499	trub2	88	58.276	Takifugu_rubripes
ENSLOCG00000000885	trub2	95	60.000	ENSTNIG00000014721	trub2	99	60.000	Tetraodon_nigroviridis
ENSLOCG00000000885	trub2	63	58.947	ENSTBEG00000000586	TRUB2	84	58.947	Tupaia_belangeri
ENSLOCG00000000885	trub2	95	57.732	ENSTTRG00000016486	TRUB2	87	57.732	Tursiops_truncatus
ENSLOCG00000000885	trub2	98	57.860	ENSUAMG00000020276	TRUB2	87	57.860	Ursus_americanus
ENSLOCG00000000885	trub2	98	58.194	ENSUMAG00000022051	TRUB2	87	58.194	Ursus_maritimus
ENSLOCG00000000885	trub2	99	44.186	ENSVPAG00000005793	TRUB2	93	44.186	Vicugna_pacos
ENSLOCG00000000885	trub2	95	60.137	ENSVVUG00000013451	TRUB2	82	60.137	Vulpes_vulpes
ENSLOCG00000000885	trub2	100	58.900	ENSXETG00000003973	trub2	94	58.900	Xenopus_tropicalis
ENSLOCG00000000885	trub2	95	60.900	ENSXCOG00000008759	trub2	86	60.900	Xiphophorus_couchianus
ENSLOCG00000000885	trub2	95	59.862	ENSXMAG00000015478	trub2	86	59.862	Xiphophorus_maculatus