EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000924 (Gene tree)
Gene ID: -
Gene Symbol: ehd1b
Alias: cb862|ehd1|ehd3|ehd3l|wu:fb95h05|zgc:92331
Full Name: EH domain-containing protein 1-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 10934 bases
Position: chrLG28:160656-171589
Accession: 102693466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001030	MMR_HSR1	PF01926.23	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001034	-	2530	XM_006642756	ENSLOCP00000001030	556 (aa)	XP_006642819	W5LY23

Gene Model

Click here to download ENSLOCG00000000924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000924	ehd1b	96	77.154	ENSLOCG00000016786	ehd3	99	78.137
ENSLOCG00000000924	ehd1b	96	68.022	ENSLOCG00000009774	ehd4	98	68.022
ENSLOCG00000000924	ehd1b	51	38.462	ENSLOCG00000002644	srl	57	40.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000924	ehd1b	96	81.921	ENSG00000110047	EHD1	100	93.827	Homo_sapiens
ENSLOCG00000000924	ehd1b	94	84.321	ENSAPOG00000013440	ehd1a	98	84.321	Acanthochromis_polyacanthus
ENSLOCG00000000924	ehd1b	99	79.529	ENSAMEG00000017785	EHD1	95	81.544	Ailuropoda_melanoleuca
ENSLOCG00000000924	ehd1b	94	84.453	ENSACIG00000022182	ehd1a	98	84.453	Amphilophus_citrinellus
ENSLOCG00000000924	ehd1b	94	83.939	ENSAOCG00000016322	ehd1a	98	83.939	Amphiprion_ocellaris
ENSLOCG00000000924	ehd1b	94	83.939	ENSAPEG00000010363	ehd1a	98	83.939	Amphiprion_percula
ENSLOCG00000000924	ehd1b	94	83.556	ENSATEG00000013980	ehd1a	98	83.556	Anabas_testudineus
ENSLOCG00000000924	ehd1b	96	81.733	ENSANAG00000034810	EHD1	99	81.733	Aotus_nancymaae
ENSLOCG00000000924	ehd1b	94	84.321	ENSACLG00000016016	ehd1a	98	84.321	Astatotilapia_calliptera
ENSLOCG00000000924	ehd1b	96	82.109	ENSAMXG00000031892	-	99	82.109	Astyanax_mexicanus
ENSLOCG00000000924	ehd1b	96	81.955	ENSAMXG00000039344	ehd1a	99	81.955	Astyanax_mexicanus
ENSLOCG00000000924	ehd1b	96	81.733	ENSBTAG00000050712	EHD1	99	81.733	Bos_taurus
ENSLOCG00000000924	ehd1b	96	62.847	WBGene00004373	rme-1	97	62.847	Caenorhabditis_elegans
ENSLOCG00000000924	ehd1b	96	81.544	ENSCJAG00000002660	EHD1	99	81.544	Callithrix_jacchus
ENSLOCG00000000924	ehd1b	79	77.727	ENSCAFG00000014128	EHD1	92	79.724	Canis_familiaris
ENSLOCG00000000924	ehd1b	99	80.328	ENSCAFG00020014846	EHD1	99	81.921	Canis_lupus_dingo
ENSLOCG00000000924	ehd1b	96	81.733	ENSCHIG00000020707	-	99	81.733	Capra_hircus
ENSLOCG00000000924	ehd1b	96	81.921	ENSCPOG00000008157	EHD1	99	81.921	Cavia_porcellus
ENSLOCG00000000924	ehd1b	97	80.776	ENSCCAG00000004590	EHD1	99	81.733	Cebus_capucinus
ENSLOCG00000000924	ehd1b	99	79.710	ENSCATG00000010658	EHD1	97	81.733	Cercocebus_atys
ENSLOCG00000000924	ehd1b	96	81.921	ENSCLAG00000016412	EHD1	99	81.921	Chinchilla_lanigera
ENSLOCG00000000924	ehd1b	96	81.921	ENSCSAG00000007397	EHD1	99	81.921	Chlorocebus_sabaeus
ENSLOCG00000000924	ehd1b	96	80.488	ENSCPBG00000023692	EHD1	100	80.488	Chrysemys_picta_bellii
ENSLOCG00000000924	ehd1b	99	80.108	ENSCANG00000042123	EHD1	99	81.921	Colobus_angolensis_palliatus
ENSLOCG00000000924	ehd1b	96	81.733	ENSCGRG00001019701	Ehd1	99	81.733	Cricetulus_griseus_chok1gshd
ENSLOCG00000000924	ehd1b	90	80.800	ENSCGRG00000000662	Ehd1	99	80.800	Cricetulus_griseus_crigri
ENSLOCG00000000924	ehd1b	94	82.759	ENSCSEG00000006078	ehd1a	98	82.759	Cynoglossus_semilaevis
ENSLOCG00000000924	ehd1b	94	83.748	ENSCVAG00000012152	ehd1a	98	83.748	Cyprinodon_variegatus
ENSLOCG00000000924	ehd1b	96	84.557	ENSDARG00000014793	ehd1b	99	84.557	Danio_rerio
ENSLOCG00000000924	ehd1b	96	81.168	ENSDARG00000098853	ehd1a	99	81.168	Danio_rerio
ENSLOCG00000000924	ehd1b	55	90.909	ENSDNOG00000017834	EHD1	82	91.176	Dasypus_novemcinctus
ENSLOCG00000000924	ehd1b	96	81.733	ENSDORG00000030186	Ehd1	99	81.733	Dipodomys_ordii
ENSLOCG00000000924	ehd1b	96	63.738	FBgn0016693	Past1	99	63.738	Drosophila_melanogaster
ENSLOCG00000000924	ehd1b	96	70.544	ENSEBUG00000009968	EHD1	99	70.544	Eptatretus_burgeri
ENSLOCG00000000924	ehd1b	55	81.494	ENSEBUG00000010829	EHD1	89	82.026	Eptatretus_burgeri
ENSLOCG00000000924	ehd1b	96	82.298	ENSEASG00005018250	EHD1	99	82.298	Equus_asinus_asinus
ENSLOCG00000000924	ehd1b	96	82.298	ENSECAG00000011638	EHD1	99	82.298	Equus_caballus
ENSLOCG00000000924	ehd1b	96	83.804	ENSELUG00000016093	ehd1b	99	84.221	Esox_lucius
ENSLOCG00000000924	ehd1b	94	83.269	ENSELUG00000007973	-	97	83.269	Esox_lucius
ENSLOCG00000000924	ehd1b	97	80.996	ENSFCAG00000027734	EHD1	97	82.298	Felis_catus
ENSLOCG00000000924	ehd1b	96	82.109	ENSFDAG00000007697	EHD1	99	82.109	Fukomys_damarensis
ENSLOCG00000000924	ehd1b	94	84.512	ENSFHEG00000002690	ehd1a	98	84.512	Fundulus_heteroclitus
ENSLOCG00000000924	ehd1b	94	84.069	ENSGMOG00000012192	ehd1a	99	84.069	Gadus_morhua
ENSLOCG00000000924	ehd1b	94	83.779	ENSGAFG00000000730	ehd1a	98	83.779	Gambusia_affinis
ENSLOCG00000000924	ehd1b	94	83.748	ENSGACG00000017605	ehd1a	99	83.748	Gasterosteus_aculeatus
ENSLOCG00000000924	ehd1b	99	78.445	ENSGAGG00000001677	-	91	80.669	Gopherus_agassizii
ENSLOCG00000000924	ehd1b	94	84.321	ENSHBUG00000012087	ehd1a	98	84.321	Haplochromis_burtoni
ENSLOCG00000000924	ehd1b	96	81.921	ENSHGLG00000010254	EHD1	99	81.921	Heterocephalus_glaber_female
ENSLOCG00000000924	ehd1b	96	81.921	ENSHGLG00100014206	EHD1	99	81.921	Heterocephalus_glaber_male
ENSLOCG00000000924	ehd1b	94	82.983	ENSHCOG00000006825	ehd1a	98	82.983	Hippocampus_comes
ENSLOCG00000000924	ehd1b	96	80.603	ENSIPUG00000017390	EHD1	99	80.603	Ictalurus_punctatus
ENSLOCG00000000924	ehd1b	96	83.271	ENSIPUG00000002819	ehd1a	99	83.271	Ictalurus_punctatus
ENSLOCG00000000924	ehd1b	99	80.292	ENSSTOG00000009829	EHD1	99	82.109	Ictidomys_tridecemlineatus
ENSLOCG00000000924	ehd1b	96	81.544	ENSJJAG00000022299	Ehd1	99	81.544	Jaculus_jaculus
ENSLOCG00000000924	ehd1b	94	84.704	ENSKMAG00000004764	ehd1a	98	84.704	Kryptolebias_marmoratus
ENSLOCG00000000924	ehd1b	94	84.321	ENSLBEG00000004390	ehd1a	98	84.645	Labrus_bergylta
ENSLOCG00000000924	ehd1b	96	81.426	ENSLACG00000018148	EHD1	99	81.426	Latimeria_chalumnae
ENSLOCG00000000924	ehd1b	98	77.314	ENSLAFG00000011643	EHD1	99	79.284	Loxodonta_africana
ENSLOCG00000000924	ehd1b	96	81.921	ENSMFAG00000032608	EHD1	99	81.921	Macaca_fascicularis
ENSLOCG00000000924	ehd1b	97	80.812	ENSMMUG00000003972	EHD1	97	81.921	Macaca_mulatta
ENSLOCG00000000924	ehd1b	96	81.921	ENSMNEG00000031673	EHD1	99	81.921	Macaca_nemestrina
ENSLOCG00000000924	ehd1b	96	81.921	ENSMLEG00000031992	EHD1	99	81.921	Mandrillus_leucophaeus
ENSLOCG00000000924	ehd1b	94	83.939	ENSMAMG00000021737	ehd1a	98	83.939	Mastacembelus_armatus
ENSLOCG00000000924	ehd1b	94	84.321	ENSMZEG00005004305	ehd1a	98	84.321	Maylandia_zebra
ENSLOCG00000000924	ehd1b	96	81.733	ENSMAUG00000013823	Ehd1	99	81.733	Mesocricetus_auratus
ENSLOCG00000000924	ehd1b	97	80.812	ENSMICG00000001239	EHD1	99	80.135	Microcebus_murinus
ENSLOCG00000000924	ehd1b	96	81.921	ENSMOCG00000015517	Ehd1	99	81.921	Microtus_ochrogaster
ENSLOCG00000000924	ehd1b	94	83.174	ENSMMOG00000003005	ehd1a	98	83.174	Mola_mola
ENSLOCG00000000924	ehd1b	94	84.512	ENSMALG00000012679	ehd1a	98	84.512	Monopterus_albus
ENSLOCG00000000924	ehd1b	96	81.733	MGP_CAROLIEiJ_G0022603	Ehd1	99	81.733	Mus_caroli
ENSLOCG00000000924	ehd1b	96	81.733	ENSMUSG00000024772	Ehd1	99	81.733	Mus_musculus
ENSLOCG00000000924	ehd1b	96	81.544	MGP_PahariEiJ_G0014097	Ehd1	99	81.544	Mus_pahari
ENSLOCG00000000924	ehd1b	96	81.733	MGP_SPRETEiJ_G0023514	Ehd1	99	81.733	Mus_spretus
ENSLOCG00000000924	ehd1b	96	82.109	ENSMPUG00000012497	EHD1	99	82.109	Mustela_putorius_furo
ENSLOCG00000000924	ehd1b	96	81.921	ENSNGAG00000020358	Ehd1	99	81.921	Nannospalax_galili
ENSLOCG00000000924	ehd1b	94	84.321	ENSNBRG00000002933	ehd1a	98	84.321	Neolamprologus_brichardi
ENSLOCG00000000924	ehd1b	96	81.921	ENSNLEG00000005375	EHD1	99	81.921	Nomascus_leucogenys
ENSLOCG00000000924	ehd1b	96	81.921	ENSOPRG00000011350	EHD1	99	81.921	Ochotona_princeps
ENSLOCG00000000924	ehd1b	96	81.921	ENSODEG00000014527	EHD1	99	81.921	Octodon_degus
ENSLOCG00000000924	ehd1b	58	88.125	ENSOCUG00000029532	EHD1	90	91.176	Oryctolagus_cuniculus
ENSLOCG00000000924	ehd1b	94	83.939	ENSORLG00000022561	ehd1a	98	83.939	Oryzias_latipes
ENSLOCG00000000924	ehd1b	94	83.939	ENSORLG00020018451	ehd1a	98	83.939	Oryzias_latipes_hni
ENSLOCG00000000924	ehd1b	94	83.939	ENSORLG00015017672	ehd1a	98	83.939	Oryzias_latipes_hsok
ENSLOCG00000000924	ehd1b	94	84.130	ENSOMEG00000019329	ehd1a	98	84.130	Oryzias_melastigma
ENSLOCG00000000924	ehd1b	96	81.921	ENSOGAG00000009351	EHD1	99	81.921	Otolemur_garnettii
ENSLOCG00000000924	ehd1b	87	81.649	ENSOARG00000010447	EHD1	99	81.649	Ovis_aries
ENSLOCG00000000924	ehd1b	96	81.921	ENSPPAG00000037178	EHD1	99	81.921	Pan_paniscus
ENSLOCG00000000924	ehd1b	97	78.967	ENSPPRG00000006031	EHD1	97	80.038	Panthera_pardus
ENSLOCG00000000924	ehd1b	97	80.812	ENSPTRG00000003851	EHD1	97	81.921	Pan_troglodytes
ENSLOCG00000000924	ehd1b	99	79.891	ENSPANG00000023358	EHD1	97	81.921	Papio_anubis
ENSLOCG00000000924	ehd1b	55	93.831	ENSPKIG00000020297	-	75	94.118	Paramormyrops_kingsleyae
ENSLOCG00000000924	ehd1b	94	84.190	ENSPKIG00000023165	-	99	84.190	Paramormyrops_kingsleyae
ENSLOCG00000000924	ehd1b	96	81.356	ENSPSIG00000005727	EHD1	99	81.356	Pelodiscus_sinensis
ENSLOCG00000000924	ehd1b	95	82.609	ENSPMGG00000017810	ehd1a	97	83.462	Periophthalmus_magnuspinnatus
ENSLOCG00000000924	ehd1b	96	81.921	ENSPEMG00000010917	Ehd1	99	81.921	Peromyscus_maniculatus_bairdii
ENSLOCG00000000924	ehd1b	96	81.921	ENSPCIG00000014850	EHD1	99	81.921	Phascolarctos_cinereus
ENSLOCG00000000924	ehd1b	70	62.374	ENSPCIG00000017053	-	96	62.374	Phascolarctos_cinereus
ENSLOCG00000000924	ehd1b	94	84.423	ENSPFOG00000010613	ehd1a	97	84.423	Poecilia_formosa
ENSLOCG00000000924	ehd1b	94	84.423	ENSPLAG00000023296	ehd1a	98	84.423	Poecilia_latipinna
ENSLOCG00000000924	ehd1b	94	84.231	ENSPMEG00000003397	ehd1a	98	84.231	Poecilia_mexicana
ENSLOCG00000000924	ehd1b	94	84.231	ENSPREG00000015893	ehd1a	98	84.231	Poecilia_reticulata
ENSLOCG00000000924	ehd1b	96	81.921	ENSPPYG00000003093	EHD1	99	81.921	Pongo_abelii
ENSLOCG00000000924	ehd1b	99	80.109	ENSPCOG00000010309	EHD1	99	81.921	Propithecus_coquereli
ENSLOCG00000000924	ehd1b	96	81.544	ENSPVAG00000007890	EHD1	99	81.544	Pteropus_vampyrus
ENSLOCG00000000924	ehd1b	94	84.321	ENSPNYG00000015448	ehd1a	98	84.321	Pundamilia_nyererei
ENSLOCG00000000924	ehd1b	96	83.271	ENSPNAG00000023091	ehd1a	99	83.271	Pygocentrus_nattereri
ENSLOCG00000000924	ehd1b	96	84.023	ENSPNAG00000007408	EHD1	99	84.023	Pygocentrus_nattereri
ENSLOCG00000000924	ehd1b	96	81.733	ENSRNOG00000043503	Ehd1	99	81.733	Rattus_norvegicus
ENSLOCG00000000924	ehd1b	96	81.921	ENSRBIG00000039111	EHD1	99	81.921	Rhinopithecus_bieti
ENSLOCG00000000924	ehd1b	96	81.921	ENSRROG00000026366	EHD1	99	81.921	Rhinopithecus_roxellana
ENSLOCG00000000924	ehd1b	96	81.733	ENSSBOG00000023399	EHD1	99	81.733	Saimiri_boliviensis_boliviensis
ENSLOCG00000000924	ehd1b	72	61.425	ENSSHAG00000007430	-	95	60.621	Sarcophilus_harrisii
ENSLOCG00000000924	ehd1b	96	84.586	ENSSFOG00015006481	-	99	84.586	Scleropages_formosus
ENSLOCG00000000924	ehd1b	87	84.805	ENSSFOG00015019587	EHD1	99	84.805	Scleropages_formosus
ENSLOCG00000000924	ehd1b	94	82.983	ENSSMAG00000018210	ehd1a	98	82.983	Scophthalmus_maximus
ENSLOCG00000000924	ehd1b	94	84.512	ENSSDUG00000016436	ehd1a	98	84.837	Seriola_dumerili
ENSLOCG00000000924	ehd1b	94	84.512	ENSSLDG00000015328	ehd1a	98	84.837	Seriola_lalandi_dorsalis
ENSLOCG00000000924	ehd1b	94	84.130	ENSSPAG00000008682	ehd1a	98	84.130	Stegastes_partitus
ENSLOCG00000000924	ehd1b	96	81.733	ENSSSCG00000013017	EHD1	99	81.733	Sus_scrofa
ENSLOCG00000000924	ehd1b	94	84.483	ENSTRUG00000025890	ehd1a	98	84.483	Takifugu_rubripes
ENSLOCG00000000924	ehd1b	94	83.685	ENSTNIG00000016792	ehd1a	97	83.685	Tetraodon_nigroviridis
ENSLOCG00000000924	ehd1b	75	70.983	ENSTBEG00000007057	EHD1	100	70.983	Tupaia_belangeri
ENSLOCG00000000924	ehd1b	96	81.356	ENSTTRG00000008887	EHD1	99	81.356	Tursiops_truncatus
ENSLOCG00000000924	ehd1b	96	81.921	ENSUAMG00000012071	EHD1	99	81.921	Ursus_americanus
ENSLOCG00000000924	ehd1b	95	79.737	ENSUMAG00000007890	EHD1	98	80.651	Ursus_maritimus
ENSLOCG00000000924	ehd1b	99	80.328	ENSVVUG00000027552	EHD1	84	81.921	Vulpes_vulpes
ENSLOCG00000000924	ehd1b	96	80.038	ENSXETG00000001638	ehd1	99	80.038	Xenopus_tropicalis
ENSLOCG00000000924	ehd1b	96	82.959	ENSXCOG00000001781	ehd1a	99	82.959	Xiphophorus_couchianus
ENSLOCG00000000924	ehd1b	94	84.160	ENSXMAG00000005301	ehd1a	98	84.160	Xiphophorus_maculatus