EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000000947 (Gene tree)
Gene ID: 102683206
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 21762 bases
Position: chrLG18:783491-805252
Accession: 102683206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	1	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	2	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	3	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	4	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	5	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	6	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	7	8
ENSLOCP00000001090	zf-C2H2	PF00096.26	4.9e-36	8	8
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	1	7
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	2	7
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	3	7
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	4	7
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	5	7
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	6	7
ENSLOCP00000001060	zf-C2H2	PF00096.26	1e-35	7	7
ENSLOCP00000001090	zf-met	PF12874.7	6.8e-10	1	1
ENSLOCP00000001060	zf-met	PF12874.7	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001094	-	2801	XM_006639430	ENSLOCP00000001090	830 (aa)	-	W5LY83
ENSLOCT00000001064	-	5508	-	ENSLOCP00000001060	875 (aa)	-	W5LY53

Gene Model

Click here to download ENSLOCG00000000947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000000947	znf341	50	46.939	ENSLOCG00000005750	gfi1b	79	36.264
ENSLOCG00000000947	znf341	50	32.057	ENSLOCG00000017736	znf648	61	31.754
ENSLOCG00000000947	znf341	50	43.396	ENSLOCG00000011702	rreb1b	50	40.000
ENSLOCG00000000947	znf341	52	31.447	ENSLOCG00000004600	PRDM15	55	31.447
ENSLOCG00000000947	znf341	51	34.091	ENSLOCG00000017864	-	99	31.720
ENSLOCG00000000947	znf341	50	34.815	ENSLOCG00000014366	-	96	32.103
ENSLOCG00000000947	znf341	57	57.143	ENSLOCG00000003926	znf236	77	50.000
ENSLOCG00000000947	znf341	55	33.673	ENSLOCG00000009974	zbtb49	54	33.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000947	znf341	97	66.516	ENSAPOG00000016509	znf341	96	65.746	Acanthochromis_polyacanthus
ENSLOCG00000000947	znf341	96	67.248	ENSACIG00000016180	znf341	91	67.372	Amphilophus_citrinellus
ENSLOCG00000000947	znf341	97	67.386	ENSAOCG00000000960	znf341	94	66.741	Amphiprion_ocellaris
ENSLOCG00000000947	znf341	97	69.145	ENSAPEG00000006358	znf341	87	71.937	Amphiprion_percula
ENSLOCG00000000947	znf341	96	68.700	ENSATEG00000003196	znf341	94	67.494	Anabas_testudineus
ENSLOCG00000000947	znf341	73	64.030	ENSACLG00000014349	znf341	96	67.812	Astatotilapia_calliptera
ENSLOCG00000000947	znf341	90	72.764	ENSAMXG00000016921	znf341	99	67.352	Astyanax_mexicanus
ENSLOCG00000000947	znf341	95	67.047	ENSCSEG00000003536	znf341	96	65.965	Cynoglossus_semilaevis
ENSLOCG00000000947	znf341	93	64.483	ENSCVAG00000016325	znf341	90	68.797	Cyprinodon_variegatus
ENSLOCG00000000947	znf341	100	67.629	ENSDARG00000103725	znf341	100	67.629	Danio_rerio
ENSLOCG00000000947	znf341	94	74.557	ENSELUG00000018438	znf341	96	73.159	Esox_lucius
ENSLOCG00000000947	znf341	89	68.193	ENSFHEG00000009763	znf341	99	67.426	Fundulus_heteroclitus
ENSLOCG00000000947	znf341	89	68.961	ENSGAFG00000020131	znf341	97	63.657	Gambusia_affinis
ENSLOCG00000000947	znf341	73	64.030	ENSHBUG00000012828	znf341	96	67.239	Haplochromis_burtoni
ENSLOCG00000000947	znf341	100	68.371	ENSHCOG00000004879	znf341	99	68.138	Hippocampus_comes
ENSLOCG00000000947	znf341	88	70.300	ENSIPUG00000002075	znf341	96	66.667	Ictalurus_punctatus
ENSLOCG00000000947	znf341	99	63.870	ENSKMAG00000006686	znf341	95	63.535	Kryptolebias_marmoratus
ENSLOCG00000000947	znf341	89	70.654	ENSLBEG00000016666	znf341	92	67.596	Labrus_bergylta
ENSLOCG00000000947	znf341	89	68.945	ENSMAMG00000008000	znf341	87	86.364	Mastacembelus_armatus
ENSLOCG00000000947	znf341	65	71.777	ENSMZEG00005021851	znf341	96	67.084	Maylandia_zebra
ENSLOCG00000000947	znf341	90	70.706	ENSMMOG00000019626	znf341	96	71.180	Mola_mola
ENSLOCG00000000947	znf341	100	59.862	ENSMODG00000002856	ZNF341	100	59.862	Monodelphis_domestica
ENSLOCG00000000947	znf341	89	71.734	ENSMALG00000006492	znf341	97	71.627	Monopterus_albus
ENSLOCG00000000947	znf341	94	70.149	ENSNBRG00000019550	znf341	95	68.038	Neolamprologus_brichardi
ENSLOCG00000000947	znf341	96	70.991	ENSONIG00000009210	znf341	99	68.609	Oreochromis_niloticus
ENSLOCG00000000947	znf341	93	68.670	ENSORLG00000000956	znf341	92	69.103	Oryzias_latipes
ENSLOCG00000000947	znf341	88	73.177	ENSORLG00020004162	znf341	99	63.870	Oryzias_latipes_hni
ENSLOCG00000000947	znf341	93	69.152	ENSORLG00015018360	znf341	99	66.228	Oryzias_latipes_hsok
ENSLOCG00000000947	znf341	94	67.184	ENSOMEG00000014403	znf341	93	67.422	Oryzias_melastigma
ENSLOCG00000000947	znf341	100	73.191	ENSPKIG00000023946	znf341	99	72.598	Paramormyrops_kingsleyae
ENSLOCG00000000947	znf341	99	63.625	ENSPMGG00000014849	znf341	98	63.747	Periophthalmus_magnuspinnatus
ENSLOCG00000000947	znf341	89	71.258	ENSPFOG00000013875	znf341	99	67.078	Poecilia_formosa
ENSLOCG00000000947	znf341	89	68.991	ENSPLAG00000014192	znf341	98	63.193	Poecilia_latipinna
ENSLOCG00000000947	znf341	89	69.039	ENSPMEG00000020155	znf341	98	63.000	Poecilia_mexicana
ENSLOCG00000000947	znf341	92	68.127	ENSPREG00000001388	znf341	100	62.775	Poecilia_reticulata
ENSLOCG00000000947	znf341	96	69.145	ENSPNYG00000015106	znf341	95	67.754	Pundamilia_nyererei
ENSLOCG00000000947	znf341	90	73.138	ENSPNAG00000027229	znf341	99	69.053	Pygocentrus_nattereri
ENSLOCG00000000947	znf341	99	71.680	ENSSFOG00015014678	znf341	99	72.385	Scleropages_formosus
ENSLOCG00000000947	znf341	88	68.231	ENSSMAG00000006473	znf341	91	62.942	Scophthalmus_maximus
ENSLOCG00000000947	znf341	92	72.529	ENSSDUG00000014540	znf341	98	66.361	Seriola_dumerili
ENSLOCG00000000947	znf341	92	73.136	ENSSLDG00000019660	znf341	94	68.945	Seriola_lalandi_dorsalis
ENSLOCG00000000947	znf341	96	66.170	ENSTRUG00000011385	znf341	90	69.335	Takifugu_rubripes
ENSLOCG00000000947	znf341	88	74.228	ENSTNIG00000005051	znf341	100	74.359	Tetraodon_nigroviridis
ENSLOCG00000000947	znf341	76	70.717	ENSXCOG00000000036	znf341	91	69.499	Xiphophorus_couchianus
ENSLOCG00000000947	znf341	98	63.636	ENSXMAG00000014133	znf341	99	63.447	Xiphophorus_maculatus