EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000001067 (Gene tree)
Gene ID: 102698341
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 12189 bases
Position: chrLG6:240296-252484
Accession: 102698341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001208	RRM_1	PF00076.22	3e-30	1	2
ENSLOCP00000001208	RRM_1	PF00076.22	3e-30	2	2
ENSLOCP00000001226	RRM_1	PF00076.22	5.5e-30	1	2
ENSLOCP00000001226	RRM_1	PF00076.22	5.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001212	-	1692	-	ENSLOCP00000001208	563 (aa)	-	W5LYK1
ENSLOCT00000001230	-	2103	XM_006631314	ENSLOCP00000001226	700 (aa)	-	W5LYL9

Gene Model

Click here to download ENSLOCG00000001067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000001067	sfpq	67	60.697	ENSLOCG00000014739	nono	83	63.684
ENSLOCG00000001067	sfpq	74	62.322	ENSLOCG00000010832	pspc1	73	67.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001067	sfpq	68	81.654	ENSG00000116560	SFPQ	88	80.808	Homo_sapiens
ENSLOCG00000001067	sfpq	72	78.164	ENSAPOG00000024257	sfpq	95	59.184	Acanthochromis_polyacanthus
ENSLOCG00000001067	sfpq	68	81.654	ENSAMEG00000000815	SFPQ	100	76.871	Ailuropoda_melanoleuca
ENSLOCG00000001067	sfpq	90	65.121	ENSACIG00000000905	sfpq	85	63.776	Amphilophus_citrinellus
ENSLOCG00000001067	sfpq	69	81.137	ENSAOCG00000002889	sfpq	95	59.091	Amphiprion_ocellaris
ENSLOCG00000001067	sfpq	69	81.137	ENSAPEG00000016556	sfpq	95	59.091	Amphiprion_percula
ENSLOCG00000001067	sfpq	77	75.223	ENSATEG00000002981	sfpq	91	65.288	Anabas_testudineus
ENSLOCG00000001067	sfpq	55	60.759	ENSANAG00000037798	-	79	62.153	Aotus_nancymaae
ENSLOCG00000001067	sfpq	66	70.509	ENSANAG00000027438	-	64	68.020	Aotus_nancymaae
ENSLOCG00000001067	sfpq	54	58.013	ENSANAG00000021268	-	100	53.541	Aotus_nancymaae
ENSLOCG00000001067	sfpq	94	57.547	ENSACLG00000022332	sfpq	89	60.031	Astatotilapia_calliptera
ENSLOCG00000001067	sfpq	76	77.136	ENSAMXG00000011538	sfpq	65	80.549	Astyanax_mexicanus
ENSLOCG00000001067	sfpq	69	80.711	ENSBTAG00000016328	SFPQ	89	61.824	Bos_taurus
ENSLOCG00000001067	sfpq	68	81.654	ENSCJAG00000001431	SFPQ	90	62.597	Callithrix_jacchus
ENSLOCG00000001067	sfpq	73	74.458	ENSCAFG00000018271	-	81	64.493	Canis_familiaris
ENSLOCG00000001067	sfpq	68	81.654	ENSCAFG00000003595	-	77	71.654	Canis_familiaris
ENSLOCG00000001067	sfpq	68	76.943	ENSCAFG00000017608	-	91	59.253	Canis_familiaris
ENSLOCG00000001067	sfpq	54	73.616	ENSCAFG00020010702	-	100	71.510	Canis_lupus_dingo
ENSLOCG00000001067	sfpq	73	74.458	ENSCAFG00020004881	-	65	75.870	Canis_lupus_dingo
ENSLOCG00000001067	sfpq	69	80.711	ENSCHIG00000023097	SFPQ	89	61.824	Capra_hircus
ENSLOCG00000001067	sfpq	54	81.494	ENSTSYG00000037120	-	100	79.261	Carlito_syrichta
ENSLOCG00000001067	sfpq	56	66.984	ENSTSYG00000035106	-	98	62.356	Carlito_syrichta
ENSLOCG00000001067	sfpq	54	71.987	ENSCPOG00000015018	-	100	67.397	Cavia_porcellus
ENSLOCG00000001067	sfpq	70	79.259	ENSCCAG00000029361	-	90	61.751	Cebus_capucinus
ENSLOCG00000001067	sfpq	63	82.584	ENSCATG00000036179	-	84	60.102	Cercocebus_atys
ENSLOCG00000001067	sfpq	68	54.822	ENSCATG00000032664	-	85	41.038	Cercocebus_atys
ENSLOCG00000001067	sfpq	54	81.494	ENSCLAG00000009583	-	100	79.261	Chinchilla_lanigera
ENSLOCG00000001067	sfpq	68	81.654	ENSCSAG00000001082	SFPQ	90	61.810	Chlorocebus_sabaeus
ENSLOCG00000001067	sfpq	54	86.601	ENSCHOG00000009131	SFPQ	100	78.478	Choloepus_hoffmanni
ENSLOCG00000001067	sfpq	68	80.916	ENSCPBG00000018674	SFPQ	67	79.310	Chrysemys_picta_bellii
ENSLOCG00000001067	sfpq	54	81.494	ENSCANG00000028087	-	100	79.261	Colobus_angolensis_palliatus
ENSLOCG00000001067	sfpq	68	81.912	ENSCGRG00001011698	Sfpq	89	62.187	Cricetulus_griseus_chok1gshd
ENSLOCG00000001067	sfpq	68	82.124	ENSCGRG00000010128	Sfpq	96	79.724	Cricetulus_griseus_crigri
ENSLOCG00000001067	sfpq	97	61.881	ENSCSEG00000007852	sfpq	65	77.804	Cynoglossus_semilaevis
ENSLOCG00000001067	sfpq	70	74.747	ENSCVAG00000019538	sfpq	80	61.220	Cyprinodon_variegatus
ENSLOCG00000001067	sfpq	99	63.339	ENSDARG00000011564	sfpq	100	86.957	Danio_rerio
ENSLOCG00000001067	sfpq	68	81.654	ENSDNOG00000049454	SFPQ	72	71.654	Dasypus_novemcinctus
ENSLOCG00000001067	sfpq	68	81.654	ENSDORG00000008109	Sfpq	89	62.441	Dipodomys_ordii
ENSLOCG00000001067	sfpq	68	74.293	ENSETEG00000001095	SFPQ	61	67.473	Echinops_telfairi
ENSLOCG00000001067	sfpq	69	80.711	ENSEASG00005012012	SFPQ	89	61.455	Equus_asinus_asinus
ENSLOCG00000001067	sfpq	69	80.711	ENSECAG00000000642	SFPQ	89	61.455	Equus_caballus
ENSLOCG00000001067	sfpq	79	78.889	ENSELUG00000023145	sfpq	71	78.251	Esox_lucius
ENSLOCG00000001067	sfpq	68	81.654	ENSFCAG00000042862	SFPQ	89	62.187	Felis_catus
ENSLOCG00000001067	sfpq	55	80.192	ENSFALG00000000731	SFPQ	100	78.693	Ficedula_albicollis
ENSLOCG00000001067	sfpq	54	70.740	ENSFDAG00000017723	-	100	70.538	Fukomys_damarensis
ENSLOCG00000001067	sfpq	70	71.939	ENSFHEG00000015200	sfpq	59	67.849	Fundulus_heteroclitus
ENSLOCG00000001067	sfpq	91	63.540	ENSGMOG00000011957	sfpq	65	80.233	Gadus_morhua
ENSLOCG00000001067	sfpq	66	85.484	ENSGMOG00000011950	SFPQ	74	82.093	Gadus_morhua
ENSLOCG00000001067	sfpq	69	80.867	ENSGALG00000002514	SFPQ	81	66.603	Gallus_gallus
ENSLOCG00000001067	sfpq	90	65.430	ENSGAFG00000014571	sfpq	95	53.683	Gambusia_affinis
ENSLOCG00000001067	sfpq	94	67.384	ENSGACG00000002034	sfpq	68	80.607	Gasterosteus_aculeatus
ENSLOCG00000001067	sfpq	68	81.654	ENSGGOG00000026354	SFPQ	100	79.261	Gorilla_gorilla
ENSLOCG00000001067	sfpq	94	57.971	ENSHBUG00000016818	sfpq	89	59.133	Haplochromis_burtoni
ENSLOCG00000001067	sfpq	68	81.026	ENSHGLG00000012001	SFPQ	90	62.382	Heterocephalus_glaber_female
ENSLOCG00000001067	sfpq	54	81.494	ENSHGLG00100004136	-	100	79.261	Heterocephalus_glaber_male
ENSLOCG00000001067	sfpq	90	62.941	ENSHCOG00000008612	sfpq	88	62.157	Hippocampus_comes
ENSLOCG00000001067	sfpq	100	67.938	ENSIPUG00000013076	SFPQ	91	70.463	Ictalurus_punctatus
ENSLOCG00000001067	sfpq	54	81.494	ENSSTOG00000014004	-	100	79.261	Ictidomys_tridecemlineatus
ENSLOCG00000001067	sfpq	68	81.654	ENSJJAG00000015633	Sfpq	89	62.267	Jaculus_jaculus
ENSLOCG00000001067	sfpq	68	77.023	ENSKMAG00000000238	sfpq	53	73.832	Kryptolebias_marmoratus
ENSLOCG00000001067	sfpq	64	85.515	ENSLBEG00000003163	sfpq	73	67.105	Labrus_bergylta
ENSLOCG00000001067	sfpq	70	80.253	ENSLACG00000014728	SFPQ	70	79.398	Latimeria_chalumnae
ENSLOCG00000001067	sfpq	68	81.654	ENSLAFG00000015951	SFPQ	81	69.922	Loxodonta_africana
ENSLOCG00000001067	sfpq	68	81.654	ENSMFAG00000000797	SFPQ	90	61.905	Macaca_fascicularis
ENSLOCG00000001067	sfpq	68	81.654	ENSMMUG00000019154	SFPQ	90	61.692	Macaca_mulatta
ENSLOCG00000001067	sfpq	68	81.654	ENSMNEG00000038895	SFPQ	90	61.905	Macaca_nemestrina
ENSLOCG00000001067	sfpq	50	73.498	ENSMLEG00000035352	-	99	70.336	Mandrillus_leucophaeus
ENSLOCG00000001067	sfpq	54	78.247	ENSMLEG00000010643	-	100	76.420	Mandrillus_leucophaeus
ENSLOCG00000001067	sfpq	94	65.729	ENSMAMG00000007875	sfpq	91	65.946	Mastacembelus_armatus
ENSLOCG00000001067	sfpq	94	59.609	ENSMZEG00005026091	sfpq	84	61.967	Maylandia_zebra
ENSLOCG00000001067	sfpq	60	81.176	ENSMGAG00000004237	SFPQ	100	72.959	Meleagris_gallopavo
ENSLOCG00000001067	sfpq	68	81.654	ENSMAUG00000006402	Sfpq	89	62.031	Mesocricetus_auratus
ENSLOCG00000001067	sfpq	68	81.654	ENSMICG00000027265	SFPQ	90	62.404	Microcebus_murinus
ENSLOCG00000001067	sfpq	70	75.802	ENSMOCG00000019075	Sfpq	98	71.882	Microtus_ochrogaster
ENSLOCG00000001067	sfpq	83	79.021	ENSMMOG00000001074	sfpq	87	62.545	Mola_mola
ENSLOCG00000001067	sfpq	68	81.088	ENSMODG00000017937	SFPQ	91	62.340	Monodelphis_domestica
ENSLOCG00000001067	sfpq	94	63.196	ENSMALG00000010381	sfpq	84	66.935	Monopterus_albus
ENSLOCG00000001067	sfpq	68	81.912	MGP_CAROLIEiJ_G0026487	Sfpq	90	61.385	Mus_caroli
ENSLOCG00000001067	sfpq	68	81.912	ENSMUSG00000028820	Sfpq	90	62.096	Mus_musculus
ENSLOCG00000001067	sfpq	68	81.912	MGP_PahariEiJ_G0028818	Sfpq	90	62.290	Mus_pahari
ENSLOCG00000001067	sfpq	68	81.912	MGP_SPRETEiJ_G0027466	Sfpq	90	62.096	Mus_spretus
ENSLOCG00000001067	sfpq	54	81.230	ENSMPUG00000014931	-	92	83.681	Mustela_putorius_furo
ENSLOCG00000001067	sfpq	68	81.234	ENSMLUG00000027090	SFPQ	96	78.422	Myotis_lucifugus
ENSLOCG00000001067	sfpq	68	81.912	ENSNGAG00000000888	Sfpq	72	71.709	Nannospalax_galili
ENSLOCG00000001067	sfpq	86	65.000	ENSNBRG00000017479	sfpq	89	59.718	Neolamprologus_brichardi
ENSLOCG00000001067	sfpq	54	81.494	ENSNLEG00000035521	-	100	79.261	Nomascus_leucogenys
ENSLOCG00000001067	sfpq	68	81.347	ENSMEUG00000014082	SFPQ	63	77.753	Notamacropus_eugenii
ENSLOCG00000001067	sfpq	68	81.654	ENSOPRG00000013696	SFPQ	61	79.814	Ochotona_princeps
ENSLOCG00000001067	sfpq	61	68.852	ENSODEG00000005485	SFPQ	66	65.753	Octodon_degus
ENSLOCG00000001067	sfpq	65	82.240	ENSONIG00000017737	sfpq	89	60.658	Oreochromis_niloticus
ENSLOCG00000001067	sfpq	54	81.433	ENSOANG00000008789	-	100	79.202	Ornithorhynchus_anatinus
ENSLOCG00000001067	sfpq	68	81.654	ENSOCUG00000001877	SFPQ	86	78.409	Oryctolagus_cuniculus
ENSLOCG00000001067	sfpq	72	75.490	ENSORLG00000007459	sfpq	95	53.814	Oryzias_latipes
ENSLOCG00000001067	sfpq	72	75.306	ENSORLG00020011818	sfpq	95	52.401	Oryzias_latipes_hni
ENSLOCG00000001067	sfpq	72	75.306	ENSORLG00015002131	sfpq	95	52.610	Oryzias_latipes_hsok
ENSLOCG00000001067	sfpq	97	71.154	ENSOMEG00000018020	sfpq	52	77.507	Oryzias_melastigma
ENSLOCG00000001067	sfpq	68	81.395	ENSOGAG00000027710	SFPQ	96	71.457	Otolemur_garnettii
ENSLOCG00000001067	sfpq	69	81.491	ENSOARG00000019439	SFPQ	69	75.439	Ovis_aries
ENSLOCG00000001067	sfpq	68	81.654	ENSPPAG00000030078	SFPQ	75	68.352	Pan_paniscus
ENSLOCG00000001067	sfpq	54	80.519	ENSPPRG00000015478	-	100	79.037	Panthera_pardus
ENSLOCG00000001067	sfpq	54	81.494	ENSPTIG00000007710	-	100	79.261	Panthera_tigris_altaica
ENSLOCG00000001067	sfpq	69	74.112	ENSPTRG00000000518	SFPQ	89	57.911	Pan_troglodytes
ENSLOCG00000001067	sfpq	68	81.654	ENSPANG00000005380	SFPQ	70	74.841	Papio_anubis
ENSLOCG00000001067	sfpq	95	75.735	ENSPKIG00000023035	sfpq	90	74.955	Paramormyrops_kingsleyae
ENSLOCG00000001067	sfpq	70	80.353	ENSPSIG00000011494	SFPQ	99	77.958	Pelodiscus_sinensis
ENSLOCG00000001067	sfpq	87	66.337	ENSPMGG00000023883	sfpq	72	72.886	Periophthalmus_magnuspinnatus
ENSLOCG00000001067	sfpq	71	79.218	ENSPEMG00000009794	Sfpq	99	73.566	Peromyscus_maniculatus_bairdii
ENSLOCG00000001067	sfpq	58	73.313	ENSPMAG00000005583	sfpq	73	67.638	Petromyzon_marinus
ENSLOCG00000001067	sfpq	63	78.458	ENSPCIG00000000923	SFPQ	78	66.667	Phascolarctos_cinereus
ENSLOCG00000001067	sfpq	93	63.227	ENSPFOG00000003127	sfpq	71	69.374	Poecilia_formosa
ENSLOCG00000001067	sfpq	90	63.320	ENSPREG00000008060	sfpq	95	52.958	Poecilia_reticulata
ENSLOCG00000001067	sfpq	68	81.654	ENSPPYG00000001560	SFPQ	90	61.905	Pongo_abelii
ENSLOCG00000001067	sfpq	67	81.606	ENSPCAG00000006164	SFPQ	60	79.767	Procavia_capensis
ENSLOCG00000001067	sfpq	68	81.654	ENSPCOG00000027127	SFPQ	89	62.016	Propithecus_coquereli
ENSLOCG00000001067	sfpq	63	83.146	ENSPVAG00000001865	SFPQ	89	59.049	Pteropus_vampyrus
ENSLOCG00000001067	sfpq	94	59.011	ENSPNYG00000007494	sfpq	89	60.407	Pundamilia_nyererei
ENSLOCG00000001067	sfpq	99	68.421	ENSPNAG00000002128	sfpq	86	68.796	Pygocentrus_nattereri
ENSLOCG00000001067	sfpq	68	81.912	ENSRNOG00000058461	Sfpq	89	62.539	Rattus_norvegicus
ENSLOCG00000001067	sfpq	67	76.842	ENSRBIG00000035286	SFPQ	100	79.261	Rhinopithecus_bieti
ENSLOCG00000001067	sfpq	68	81.654	ENSRROG00000040992	SFPQ	100	79.261	Rhinopithecus_roxellana
ENSLOCG00000001067	sfpq	54	81.494	ENSSBOG00000024972	-	100	79.261	Saimiri_boliviensis_boliviensis
ENSLOCG00000001067	sfpq	56	76.266	ENSSHAG00000012312	-	100	74.571	Sarcophilus_harrisii
ENSLOCG00000001067	sfpq	68	81.395	ENSSHAG00000016107	-	96	72.321	Sarcophilus_harrisii
ENSLOCG00000001067	sfpq	99	73.524	ENSSFOG00015009289	sfpq	78	89.744	Scleropages_formosus
ENSLOCG00000001067	sfpq	93	63.811	ENSSMAG00000018201	sfpq	86	64.107	Scophthalmus_maximus
ENSLOCG00000001067	sfpq	93	65.983	ENSSDUG00000008402	sfpq	95	61.111	Seriola_dumerili
ENSLOCG00000001067	sfpq	94	65.705	ENSSLDG00000018917	sfpq	91	65.961	Seriola_lalandi_dorsalis
ENSLOCG00000001067	sfpq	57	82.154	ENSSARG00000006409	SFPQ	100	79.946	Sorex_araneus
ENSLOCG00000001067	sfpq	68	82.940	ENSSPAG00000016550	sfpq	95	58.576	Stegastes_partitus
ENSLOCG00000001067	sfpq	69	80.711	ENSSSCG00000035690	SFPQ	89	61.875	Sus_scrofa
ENSLOCG00000001067	sfpq	69	80.867	ENSTGUG00000001722	SFPQ	99	78.190	Taeniopygia_guttata
ENSLOCG00000001067	sfpq	69	81.912	ENSTRUG00000003783	sfpq	62	80.186	Takifugu_rubripes
ENSLOCG00000001067	sfpq	90	67.939	ENSTNIG00000011331	sfpq	99	61.732	Tetraodon_nigroviridis
ENSLOCG00000001067	sfpq	61	80.741	ENSTBEG00000006238	SFPQ	60	79.710	Tupaia_belangeri
ENSLOCG00000001067	sfpq	68	78.811	ENSTTRG00000013930	SFPQ	89	60.187	Tursiops_truncatus
ENSLOCG00000001067	sfpq	54	78.896	ENSUMAG00000008056	-	100	76.989	Ursus_maritimus
ENSLOCG00000001067	sfpq	51	87.153	ENSVPAG00000006960	-	62	68.949	Vicugna_pacos
ENSLOCG00000001067	sfpq	50	72.238	ENSVVUG00000000874	-	100	71.549	Vulpes_vulpes
ENSLOCG00000001067	sfpq	68	78.608	ENSXETG00000009682	sfpq	94	86.337	Xenopus_tropicalis
ENSLOCG00000001067	sfpq	90	63.707	ENSXMAG00000016391	sfpq	55	76.486	Xiphophorus_maculatus