EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001338 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 16628 bases
Position: chrLG17:408139-424766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001516	AF-4	PF05110.13	8.9e-136	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001521	-	4086	-	ENSLOCP00000001516	409 (aa)	-	W5LZF9

Gene Model

Click here to download ENSLOCG00000001338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001338	-	98	51.084	ENSG00000144218	AFF3	98	64.796	Homo_sapiens
ENSLOCG00000001338	-	97	51.214	ENSAPLG00000016080	-	74	53.041	Anas_platyrhynchos
ENSLOCG00000001338	-	97	53.865	ENSDNOG00000047861	-	51	53.865	Dasypus_novemcinctus
ENSLOCG00000001338	-	97	53.883	ENSFALG00000003878	-	69	53.771	Ficedula_albicollis
ENSLOCG00000001338	-	100	58.981	ENSGMOG00000012559	-	77	58.981	Gadus_morhua
ENSLOCG00000001338	-	99	57.834	ENSGACG00000002900	aff3	78	57.044	Gasterosteus_aculeatus
ENSLOCG00000001338	-	95	53.695	ENSHGLG00100016907	-	50	53.695	Heterocephalus_glaber_male
ENSLOCG00000001338	-	96	52.451	ENSLACG00000009317	-	52	54.902	Latimeria_chalumnae
ENSLOCG00000001338	-	63	59.302	ENSLAFG00000018691	AFF2	89	50.694	Loxodonta_africana
ENSLOCG00000001338	-	64	47.744	ENSMMUG00000015640	AFF4	58	40.327	Macaca_mulatta
ENSLOCG00000001338	-	58	68.852	ENSMGAG00000014791	-	97	70.782	Meleagris_gallopavo
ENSLOCG00000001338	-	97	52.300	ENSMLUG00000015255	AFF3	54	52.970	Myotis_lucifugus
ENSLOCG00000001338	-	66	47.810	ENSNBRG00000006303	aff4	55	47.810	Neolamprologus_brichardi
ENSLOCG00000001338	-	99	57.946	ENSONIG00000014151	-	99	57.820	Oreochromis_niloticus
ENSLOCG00000001338	-	95	52.475	ENSOANG00000004623	-	58	54.950	Ornithorhynchus_anatinus
ENSLOCG00000001338	-	97	52.644	ENSOARG00000013353	-	78	52.644	Ovis_aries
ENSLOCG00000001338	-	58	71.837	ENSSHAG00000011593	-	96	71.837	Sarcophilus_harrisii
ENSLOCG00000001338	-	97	48.662	ENSSPUG00000009604	AFF3	51	49.760	Sphenodon_punctatus
ENSLOCG00000001338	-	97	53.398	ENSTGUG00000010075	-	61	53.285	Taeniopygia_guttata
ENSLOCG00000001338	-	99	54.439	ENSTNIG00000013869	aff3	75	53.991	Tetraodon_nigroviridis
ENSLOCG00000001338	-	58	68.067	ENSXETG00000030016	AFF3	96	68.067	Xenopus_tropicalis