EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001345 (Gene tree)
Gene ID: 102684238
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 2395 bases
Position: chrLG28:534887-537281
Accession: 102684238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001528	PTS_2-RNA	PF01885.16	9.5e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001533	-	1173	XM_006642791	ENSLOCP00000001528	245 (aa)	XP_015194295	W5LZH1

Gene Model

Click here to download ENSLOCG00000001345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001345	trpt1	92	56.444	ENSG00000149743	TRPT1	88	57.396	Homo_sapiens
ENSLOCG00000001345	trpt1	84	66.184	ENSAPOG00000012925	trpt1	90	66.184	Acanthochromis_polyacanthus
ENSLOCG00000001345	trpt1	92	58.407	ENSAMEG00000018040	TRPT1	81	60.577	Ailuropoda_melanoleuca
ENSLOCG00000001345	trpt1	79	67.526	ENSACIG00000022413	trpt1	86	67.526	Amphilophus_citrinellus
ENSLOCG00000001345	trpt1	84	66.184	ENSAOCG00000001163	trpt1	78	66.184	Amphiprion_ocellaris
ENSLOCG00000001345	trpt1	84	66.184	ENSAPEG00000009873	trpt1	90	66.184	Amphiprion_percula
ENSLOCG00000001345	trpt1	85	67.308	ENSATEG00000014371	trpt1	91	67.308	Anabas_testudineus
ENSLOCG00000001345	trpt1	84	65.366	ENSACAG00000000696	TRPT1	90	65.366	Anolis_carolinensis
ENSLOCG00000001345	trpt1	92	57.965	ENSANAG00000019580	TRPT1	81	59.615	Aotus_nancymaae
ENSLOCG00000001345	trpt1	84	66.184	ENSACLG00000016893	trpt1	90	66.184	Astatotilapia_calliptera
ENSLOCG00000001345	trpt1	83	63.725	ENSAMXG00000010533	trpt1	90	63.725	Astyanax_mexicanus
ENSLOCG00000001345	trpt1	91	56.889	ENSBTAG00000016555	TRPT1	88	57.143	Bos_taurus
ENSLOCG00000001345	trpt1	92	57.018	ENSCJAG00000018169	TRPT1	82	59.048	Callithrix_jacchus
ENSLOCG00000001345	trpt1	84	58.937	ENSCAFG00000014591	TRPT1	82	58.937	Canis_familiaris
ENSLOCG00000001345	trpt1	84	58.654	ENSCAFG00020014101	TRPT1	84	58.654	Canis_lupus_dingo
ENSLOCG00000001345	trpt1	92	57.895	ENSCHIG00000021308	TRPT1	83	59.135	Capra_hircus
ENSLOCG00000001345	trpt1	72	55.618	ENSTSYG00000026766	TRPT1	99	46.784	Carlito_syrichta
ENSLOCG00000001345	trpt1	96	54.701	ENSCAPG00000016934	TRPT1	90	56.364	Cavia_aperea
ENSLOCG00000001345	trpt1	92	56.444	ENSCPOG00000002923	TRPT1	82	58.937	Cavia_porcellus
ENSLOCG00000001345	trpt1	72	56.742	ENSCCAG00000025683	TRPT1	98	49.405	Cebus_capucinus
ENSLOCG00000001345	trpt1	92	55.066	ENSCATG00000031563	TRPT1	88	50.761	Cercocebus_atys
ENSLOCG00000001345	trpt1	92	56.889	ENSCLAG00000016380	TRPT1	82	58.937	Chinchilla_lanigera
ENSLOCG00000001345	trpt1	92	55.752	ENSCSAG00000006952	TRPT1	81	57.212	Chlorocebus_sabaeus
ENSLOCG00000001345	trpt1	82	40.976	ENSCING00000024241	-	82	40.976	Ciona_intestinalis
ENSLOCG00000001345	trpt1	62	41.830	ENSCING00000002405	-	82	41.830	Ciona_intestinalis
ENSLOCG00000001345	trpt1	86	42.857	ENSCSAVG00000003949	-	88	43.147	Ciona_savignyi
ENSLOCG00000001345	trpt1	84	40.000	ENSCSAVG00000011071	-	63	40.594	Ciona_savignyi
ENSLOCG00000001345	trpt1	92	55.066	ENSCANG00000042980	TRPT1	82	56.938	Colobus_angolensis_palliatus
ENSLOCG00000001345	trpt1	95	55.128	ENSCGRG00001008474	Trpt1	85	56.364	Cricetulus_griseus_chok1gshd
ENSLOCG00000001345	trpt1	95	55.128	ENSCGRG00000009793	Trpt1	85	56.364	Cricetulus_griseus_crigri
ENSLOCG00000001345	trpt1	80	67.513	ENSCSEG00000005840	trpt1	85	67.513	Cynoglossus_semilaevis
ENSLOCG00000001345	trpt1	93	62.445	ENSCVAG00000006318	trpt1	95	64.904	Cyprinodon_variegatus
ENSLOCG00000001345	trpt1	81	65.152	ENSDARG00000037628	trpt1	88	65.152	Danio_rerio
ENSLOCG00000001345	trpt1	87	51.628	ENSDNOG00000044923	TRPT1	69	53.769	Dasypus_novemcinctus
ENSLOCG00000001345	trpt1	93	54.701	ENSDORG00000001624	Trpt1	84	56.039	Dipodomys_ordii
ENSLOCG00000001345	trpt1	80	42.714	FBgn0053057	CG33057	92	42.424	Drosophila_melanogaster
ENSLOCG00000001345	trpt1	86	54.976	ENSEBUG00000012569	-	90	55.882	Eptatretus_burgeri
ENSLOCG00000001345	trpt1	93	58.333	ENSEASG00005019983	TRPT1	81	59.135	Equus_asinus_asinus
ENSLOCG00000001345	trpt1	92	57.080	ENSECAG00000009917	TRPT1	89	57.635	Equus_caballus
ENSLOCG00000001345	trpt1	92	60.177	ENSEEUG00000012739	TRPT1	82	62.019	Erinaceus_europaeus
ENSLOCG00000001345	trpt1	84	67.805	ENSELUG00000007385	trpt1	90	67.150	Esox_lucius
ENSLOCG00000001345	trpt1	92	57.522	ENSFCAG00000024621	TRPT1	88	56.593	Felis_catus
ENSLOCG00000001345	trpt1	92	57.080	ENSFDAG00000002738	TRPT1	82	58.654	Fukomys_damarensis
ENSLOCG00000001345	trpt1	85	65.865	ENSFHEG00000002434	trpt1	90	65.865	Fundulus_heteroclitus
ENSLOCG00000001345	trpt1	82	62.500	ENSGMOG00000008716	trpt1	97	62.500	Gadus_morhua
ENSLOCG00000001345	trpt1	87	58.411	ENSGALG00000050256	TRPT1	71	58.411	Gallus_gallus
ENSLOCG00000001345	trpt1	85	65.550	ENSGAFG00000016762	trpt1	93	65.385	Gambusia_affinis
ENSLOCG00000001345	trpt1	80	68.020	ENSGACG00000016927	trpt1	93	67.456	Gasterosteus_aculeatus
ENSLOCG00000001345	trpt1	92	56.889	ENSGGOG00000012163	TRPT1	81	58.454	Gorilla_gorilla
ENSLOCG00000001345	trpt1	84	66.667	ENSHBUG00000012772	trpt1	90	66.667	Haplochromis_burtoni
ENSLOCG00000001345	trpt1	92	56.637	ENSHGLG00000013748	TRPT1	82	58.173	Heterocephalus_glaber_female
ENSLOCG00000001345	trpt1	92	56.637	ENSHGLG00100013048	TRPT1	82	58.173	Heterocephalus_glaber_male
ENSLOCG00000001345	trpt1	84	64.734	ENSHCOG00000000218	trpt1	90	64.734	Hippocampus_comes
ENSLOCG00000001345	trpt1	83	60.784	ENSIPUG00000002573	trpt1	89	60.784	Ictalurus_punctatus
ENSLOCG00000001345	trpt1	92	57.522	ENSSTOG00000014285	TRPT1	82	59.615	Ictidomys_tridecemlineatus
ENSLOCG00000001345	trpt1	92	57.709	ENSJJAG00000010855	Trpt1	83	60.287	Jaculus_jaculus
ENSLOCG00000001345	trpt1	85	67.308	ENSKMAG00000004214	trpt1	91	67.308	Kryptolebias_marmoratus
ENSLOCG00000001345	trpt1	83	67.488	ENSLBEG00000005640	trpt1	89	67.488	Labrus_bergylta
ENSLOCG00000001345	trpt1	84	66.505	ENSLACG00000016922	TRPT1	86	66.346	Latimeria_chalumnae
ENSLOCG00000001345	trpt1	91	55.556	ENSLAFG00000009075	TRPT1	81	58.173	Loxodonta_africana
ENSLOCG00000001345	trpt1	92	55.066	ENSMFAG00000036828	TRPT1	88	50.761	Macaca_fascicularis
ENSLOCG00000001345	trpt1	92	56.000	ENSMMUG00000012940	TRPT1	88	51.269	Macaca_mulatta
ENSLOCG00000001345	trpt1	92	55.066	ENSMNEG00000033348	TRPT1	88	50.761	Macaca_nemestrina
ENSLOCG00000001345	trpt1	92	55.066	ENSMLEG00000031438	TRPT1	88	51.269	Mandrillus_leucophaeus
ENSLOCG00000001345	trpt1	84	66.184	ENSMAMG00000021617	trpt1	90	66.184	Mastacembelus_armatus
ENSLOCG00000001345	trpt1	84	66.667	ENSMZEG00005004773	trpt1	90	66.667	Maylandia_zebra
ENSLOCG00000001345	trpt1	69	55.814	ENSMAUG00000014107	Trpt1	82	55.814	Mesocricetus_auratus
ENSLOCG00000001345	trpt1	91	57.778	ENSMICG00000016950	TRPT1	89	51.741	Microcebus_murinus
ENSLOCG00000001345	trpt1	90	58.108	ENSMOCG00000021342	Trpt1	83	59.615	Microtus_ochrogaster
ENSLOCG00000001345	trpt1	80	66.497	ENSMMOG00000002896	trpt1	85	66.497	Mola_mola
ENSLOCG00000001345	trpt1	80	64.467	ENSMODG00000010226	TRPT1	89	64.467	Monodelphis_domestica
ENSLOCG00000001345	trpt1	84	65.217	ENSMALG00000012208	trpt1	84	65.217	Monopterus_albus
ENSLOCG00000001345	trpt1	90	57.014	MGP_CAROLIEiJ_G0022627	Trpt1	83	58.454	Mus_caroli
ENSLOCG00000001345	trpt1	90	57.014	ENSMUSG00000047656	Trpt1	83	58.454	Mus_musculus
ENSLOCG00000001345	trpt1	97	55.649	MGP_PahariEiJ_G0014121	Trpt1	85	57.273	Mus_pahari
ENSLOCG00000001345	trpt1	90	57.466	MGP_SPRETEiJ_G0023537	Trpt1	83	58.937	Mus_spretus
ENSLOCG00000001345	trpt1	92	57.080	ENSMPUG00000013272	TRPT1	75	58.937	Mustela_putorius_furo
ENSLOCG00000001345	trpt1	84	59.615	ENSMLUG00000024858	TRPT1	82	59.615	Myotis_lucifugus
ENSLOCG00000001345	trpt1	74	55.495	ENSNGAG00000007665	Trpt1	88	55.495	Nannospalax_galili
ENSLOCG00000001345	trpt1	84	61.712	ENSNBRG00000001528	trpt1	91	61.712	Neolamprologus_brichardi
ENSLOCG00000001345	trpt1	92	44.934	ENSNLEG00000033525	-	88	43.646	Nomascus_leucogenys
ENSLOCG00000001345	trpt1	84	64.734	ENSMEUG00000000943	TRPT1	82	64.734	Notamacropus_eugenii
ENSLOCG00000001345	trpt1	92	57.522	ENSOPRG00000015917	TRPT1	83	59.135	Ochotona_princeps
ENSLOCG00000001345	trpt1	92	55.947	ENSODEG00000015724	TRPT1	83	58.173	Octodon_degus
ENSLOCG00000001345	trpt1	84	64.734	ENSONIG00000005333	trpt1	90	64.734	Oreochromis_niloticus
ENSLOCG00000001345	trpt1	83	53.521	ENSOANG00000010375	TRPT1	90	53.521	Ornithorhynchus_anatinus
ENSLOCG00000001345	trpt1	96	55.319	ENSOCUG00000022244	TRPT1	86	57.143	Oryctolagus_cuniculus
ENSLOCG00000001345	trpt1	89	63.927	ENSORLG00000025159	trpt1	93	65.534	Oryzias_latipes
ENSLOCG00000001345	trpt1	91	64.865	ENSORLG00020018944	trpt1	92	66.667	Oryzias_latipes_hni
ENSLOCG00000001345	trpt1	74	64.641	ENSORLG00015017108	trpt1	79	65.363	Oryzias_latipes_hsok
ENSLOCG00000001345	trpt1	93	63.319	ENSOMEG00000018645	trpt1	93	66.346	Oryzias_melastigma
ENSLOCG00000001345	trpt1	87	58.216	ENSOGAG00000007134	TRPT1	82	58.654	Otolemur_garnettii
ENSLOCG00000001345	trpt1	91	56.889	ENSOARG00000004961	TRPT1	81	59.135	Ovis_aries
ENSLOCG00000001345	trpt1	74	55.801	ENSPPAG00000027600	TRPT1	88	55.249	Pan_paniscus
ENSLOCG00000001345	trpt1	89	51.142	ENSPPRG00000022870	TRPT1	88	57.143	Panthera_pardus
ENSLOCG00000001345	trpt1	72	57.303	ENSPTIG00000018872	TRPT1	97	48.538	Panthera_tigris_altaica
ENSLOCG00000001345	trpt1	74	55.801	ENSPTRG00000003822	TRPT1	88	55.249	Pan_troglodytes
ENSLOCG00000001345	trpt1	92	54.185	ENSPANG00000011001	TRPT1	88	50.254	Papio_anubis
ENSLOCG00000001345	trpt1	84	61.650	ENSPKIG00000008323	trpt1	89	61.650	Paramormyrops_kingsleyae
ENSLOCG00000001345	trpt1	90	63.348	ENSPSIG00000009910	TRPT1	87	64.251	Pelodiscus_sinensis
ENSLOCG00000001345	trpt1	84	64.878	ENSPMGG00000005037	trpt1	88	66.162	Periophthalmus_magnuspinnatus
ENSLOCG00000001345	trpt1	88	56.944	ENSPEMG00000013720	Trpt1	83	57.692	Peromyscus_maniculatus_bairdii
ENSLOCG00000001345	trpt1	83	60.294	ENSPMAG00000001449	trpt1	98	60.294	Petromyzon_marinus
ENSLOCG00000001345	trpt1	89	64.220	ENSPCIG00000008060	TRPT1	83	64.734	Phascolarctos_cinereus
ENSLOCG00000001345	trpt1	85	65.550	ENSPFOG00000009475	trpt1	92	65.385	Poecilia_formosa
ENSLOCG00000001345	trpt1	85	65.550	ENSPMEG00000003682	trpt1	92	65.385	Poecilia_mexicana
ENSLOCG00000001345	trpt1	85	65.072	ENSPREG00000015408	trpt1	92	64.904	Poecilia_reticulata
ENSLOCG00000001345	trpt1	92	57.333	ENSPPYG00000003116	TRPT1	81	58.937	Pongo_abelii
ENSLOCG00000001345	trpt1	92	56.889	ENSPCAG00000000762	TRPT1	82	58.937	Procavia_capensis
ENSLOCG00000001345	trpt1	88	57.870	ENSPCOG00000010370	TRPT1	89	50.746	Propithecus_coquereli
ENSLOCG00000001345	trpt1	84	61.712	ENSPNYG00000014805	trpt1	91	61.712	Pundamilia_nyererei
ENSLOCG00000001345	trpt1	83	65.196	ENSPNAG00000008548	trpt1	90	65.196	Pygocentrus_nattereri
ENSLOCG00000001345	trpt1	90	56.757	ENSRNOG00000023023	Trpt1	83	58.173	Rattus_norvegicus
ENSLOCG00000001345	trpt1	92	54.667	ENSRBIG00000040432	TRPT1	81	56.522	Rhinopithecus_bieti
ENSLOCG00000001345	trpt1	92	55.556	ENSRROG00000044905	TRPT1	81	57.488	Rhinopithecus_roxellana
ENSLOCG00000001345	trpt1	83	36.818	YOL102C	TPT1	95	36.818	Saccharomyces_cerevisiae
ENSLOCG00000001345	trpt1	92	57.080	ENSSBOG00000021466	TRPT1	81	58.654	Saimiri_boliviensis_boliviensis
ENSLOCG00000001345	trpt1	85	64.423	ENSSFOG00015005844	trpt1	92	64.423	Scleropages_formosus
ENSLOCG00000001345	trpt1	84	65.217	ENSSMAG00000017744	trpt1	91	65.217	Scophthalmus_maximus
ENSLOCG00000001345	trpt1	84	66.184	ENSSDUG00000017106	trpt1	92	66.184	Seriola_dumerili
ENSLOCG00000001345	trpt1	80	67.005	ENSSLDG00000015957	trpt1	82	67.895	Seriola_lalandi_dorsalis
ENSLOCG00000001345	trpt1	72	67.232	ENSSPAG00000007557	trpt1	72	67.232	Stegastes_partitus
ENSLOCG00000001345	trpt1	89	58.636	ENSSSCG00000013040	TRPT1	80	59.434	Sus_scrofa
ENSLOCG00000001345	trpt1	84	64.563	ENSTRUG00000023723	trpt1	89	64.563	Takifugu_rubripes
ENSLOCG00000001345	trpt1	84	65.217	ENSTNIG00000003381	trpt1	90	65.217	Tetraodon_nigroviridis
ENSLOCG00000001345	trpt1	87	55.869	ENSTBEG00000006023	TRPT1	81	56.039	Tupaia_belangeri
ENSLOCG00000001345	trpt1	92	56.828	ENSTTRG00000010252	TRPT1	81	58.173	Tursiops_truncatus
ENSLOCG00000001345	trpt1	91	58.222	ENSUAMG00000015208	TRPT1	81	60.096	Ursus_americanus
ENSLOCG00000001345	trpt1	91	58.222	ENSUMAG00000001410	TRPT1	81	60.096	Ursus_maritimus
ENSLOCG00000001345	trpt1	92	56.637	ENSVVUG00000029774	TRPT1	85	58.654	Vulpes_vulpes
ENSLOCG00000001345	trpt1	85	60.766	ENSXETG00000007196	trpt1	90	60.766	Xenopus_tropicalis
ENSLOCG00000001345	trpt1	84	63.768	ENSXCOG00000001614	trpt1	89	63.768	Xiphophorus_couchianus
ENSLOCG00000001345	trpt1	84	64.734	ENSXMAG00000003142	trpt1	93	64.734	Xiphophorus_maculatus