EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLOCG00000001409 (Gene tree)
Gene ID
102689906
Gene Symbol
zcrb1
Alias
si:ch211-155a11.4|zgc:110711
Full Name
zinc finger CCHC-type and RNA binding motif containing 1
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Minus strand
Length
10030 bases
Position
chrJH591411.1:1222559-1232588
Accession
102689906
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000001633RRM_5PF13893.62.9e-0711
ENSLOCP00000001633RRM_1PF00076.224.9e-2211
ENSLOCP00000001613RRM_1PF00076.222.6e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000001638-4398XM_006642893ENSLOCP00000001633218 (aa)XP_015194431W5LZS6
ENSLOCT00000001618-4404-ENSLOCP00000001613220 (aa)-W5LZQ6
Gene Model
Click here to download ENSLOCG00000001409's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001409's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000001409zcrb110079.545ENSG00000139168ZCRB110084.962Homo_sapiens
ENSLOCG00000001409zcrb110082.511ENSAPOG00000012709zcrb110080.269Acanthochromis_polyacanthus
ENSLOCG00000001409zcrb110080.000ENSAMEG00000013837ZCRB110080.909Ailuropoda_melanoleuca
ENSLOCG00000001409zcrb110082.727ENSACIG00000015990zcrb110080.909Amphilophus_citrinellus
ENSLOCG00000001409zcrb110081.166ENSAOCG00000015798zcrb110078.924Amphiprion_ocellaris
ENSLOCG00000001409zcrb110081.614ENSAPEG00000017955zcrb110079.372Amphiprion_percula
ENSLOCG00000001409zcrb110071.560ENSATEG00000012544zcrb110070.642Anabas_testudineus
ENSLOCG00000001409zcrb110078.667ENSAPLG00000004312ZCRB110078.222Anas_platyrhynchos
ENSLOCG00000001409zcrb110082.273ENSACAG00000003172ZCRB110080.909Anolis_carolinensis
ENSLOCG00000001409zcrb110079.545ENSANAG00000020058ZCRB110079.545Aotus_nancymaae
ENSLOCG00000001409zcrb110078.733ENSACLG00000001060zcrb110079.186Astatotilapia_calliptera
ENSLOCG00000001409zcrb110083.028ENSAMXG00000033790zcrb110083.028Astyanax_mexicanus
ENSLOCG00000001409zcrb110077.727ENSBTAG00000018340-10078.636Bos_taurus
ENSLOCG00000001409zcrb110079.091ENSBTAG00000019119ZCRB110080.000Bos_taurus
ENSLOCG00000001409zcrb110079.545ENSCJAG00000017749ZCRB110079.545Callithrix_jacchus
ENSLOCG00000001409zcrb110079.091ENSCAFG00000030751ZCRB110080.000Canis_familiaris
ENSLOCG00000001409zcrb110079.091ENSCAFG00020010455ZCRB110080.000Canis_lupus_dingo
ENSLOCG00000001409zcrb110079.091ENSCHIG00000010312-10080.000Capra_hircus
ENSLOCG00000001409zcrb110072.727ENSCHIG00000012567-10073.636Capra_hircus
ENSLOCG00000001409zcrb110060.000ENSTSYG00000026505-10059.091Carlito_syrichta
ENSLOCG00000001409zcrb110080.000ENSTSYG00000010691-10080.000Carlito_syrichta
ENSLOCG00000001409zcrb18175.000ENSTSYG00000025575-9975.000Carlito_syrichta
ENSLOCG00000001409zcrb16667.133ENSCAPG00000011576-10055.944Cavia_aperea
ENSLOCG00000001409zcrb110081.279ENSCPOG00000031127ZCRB110080.365Cavia_porcellus
ENSLOCG00000001409zcrb17985.632ENSCCAG00000032546-8885.632Cebus_capucinus
ENSLOCG00000001409zcrb15986.719ENSCCAG00000035450-7886.508Cebus_capucinus
ENSLOCG00000001409zcrb16274.820ENSCCAG00000021693-7875.385Cebus_capucinus
ENSLOCG00000001409zcrb110078.636ENSCATG00000028610ZCRB110078.636Cercocebus_atys
ENSLOCG00000001409zcrb110080.822ENSCLAG00000002653ZCRB110079.909Chinchilla_lanigera
ENSLOCG00000001409zcrb110080.000ENSCSAG00000007086ZCRB110080.000Chlorocebus_sabaeus
ENSLOCG00000001409zcrb110066.818ENSCHOG00000004490ZCRB110066.818Choloepus_hoffmanni
ENSLOCG00000001409zcrb19780.841ENSCPBG00000015507ZCRB19879.907Chrysemys_picta_bellii
ENSLOCG00000001409zcrb19953.947ENSCING00000017297-9951.982Ciona_intestinalis
ENSLOCG00000001409zcrb18447.423ENSCSAVG00000010693-9946.907Ciona_savignyi
ENSLOCG00000001409zcrb110079.545ENSCANG00000042161ZCRB110079.545Colobus_angolensis_palliatus
ENSLOCG00000001409zcrb110077.169ENSCGRG00001023392Zcrb110080.365Cricetulus_griseus_chok1gshd
ENSLOCG00000001409zcrb110077.169ENSCGRG00000004778Zcrb110080.365Cricetulus_griseus_crigri
ENSLOCG00000001409zcrb110082.648ENSCSEG00000010498zcrb110081.279Cynoglossus_semilaevis
ENSLOCG00000001409zcrb110079.545ENSCVAG00000001057zcrb110081.364Cyprinodon_variegatus
ENSLOCG00000001409zcrb110083.028ENSDARG00000045691zcrb110083.028Danio_rerio
ENSLOCG00000001409zcrb16864.000ENSDNOG00000038480-9963.158Dasypus_novemcinctus
ENSLOCG00000001409zcrb15983.721ENSDNOG00000049476-7984.252Dasypus_novemcinctus
ENSLOCG00000001409zcrb110077.273ENSDNOG00000048722-10078.182Dasypus_novemcinctus
ENSLOCG00000001409zcrb110050.909ENSDORG00000026623-10055.455Dipodomys_ordii
ENSLOCG00000001409zcrb18174.719ENSDORG00000025789-10076.966Dipodomys_ordii
ENSLOCG00000001409zcrb110074.545ENSETEG00000019302ZCRB110075.000Echinops_telfairi
ENSLOCG00000001409zcrb19970.183ENSEBUG00000010289zcrb19968.807Eptatretus_burgeri
ENSLOCG00000001409zcrb110081.364ENSEASG00005023491ZCRB19379.091Equus_asinus_asinus
ENSLOCG00000001409zcrb110081.364ENSECAG00000012174ZCRB110080.000Equus_caballus
ENSLOCG00000001409zcrb110073.636ENSEEUG00000000397ZCRB110073.973Erinaceus_europaeus
ENSLOCG00000001409zcrb110087.330ENSELUG00000020877zcrb110087.330Esox_lucius
ENSLOCG00000001409zcrb15075.229ENSFCAG00000035062-7075.229Felis_catus
ENSLOCG00000001409zcrb110079.545ENSFCAG00000014760-10080.455Felis_catus
ENSLOCG00000001409zcrb110079.091ENSFALG00000010262ZCRB110079.909Ficedula_albicollis
ENSLOCG00000001409zcrb110065.596ENSFDAG00000004074-10063.303Fukomys_damarensis
ENSLOCG00000001409zcrb110057.534ENSFDAG00000003663-10054.795Fukomys_damarensis
ENSLOCG00000001409zcrb110081.279ENSFDAG00000013019-10078.995Fukomys_damarensis
ENSLOCG00000001409zcrb110083.182ENSFHEG00000007426zcrb110080.909Fundulus_heteroclitus
ENSLOCG00000001409zcrb110076.652ENSGMOG00000018788zcrb110076.211Gadus_morhua
ENSLOCG00000001409zcrb110078.636ENSGALG00000009544ZCRB110078.995Gallus_gallus
ENSLOCG00000001409zcrb110081.364ENSGAFG00000017414zcrb110081.364Gambusia_affinis
ENSLOCG00000001409zcrb110080.180ENSGACG00000018860zcrb110080.631Gasterosteus_aculeatus
ENSLOCG00000001409zcrb110082.273ENSGAGG00000008782ZCRB110081.364Gopherus_agassizii
ENSLOCG00000001409zcrb110079.545ENSGGOG00000015647ZCRB110079.545Gorilla_gorilla
ENSLOCG00000001409zcrb110060.181ENSGGOG00000043362-10063.128Gorilla_gorilla
ENSLOCG00000001409zcrb110078.281ENSHBUG00000006367zcrb110078.733Haplochromis_burtoni
ENSLOCG00000001409zcrb110071.689ENSHGLG00000006122-10068.950Heterocephalus_glaber_female
ENSLOCG00000001409zcrb110075.799ENSHGLG00000007867-10073.059Heterocephalus_glaber_female
ENSLOCG00000001409zcrb110069.091ENSHGLG00000006280-10064.220Heterocephalus_glaber_female
ENSLOCG00000001409zcrb110068.950ENSHGLG00000008186-10066.667Heterocephalus_glaber_female
ENSLOCG00000001409zcrb110081.900ENSHGLG00000001325-10078.281Heterocephalus_glaber_female
ENSLOCG00000001409zcrb18164.607ENSHGLG00100012132-10058.696Heterocephalus_glaber_male
ENSLOCG00000001409zcrb110071.233ENSHGLG00100009473-10068.950Heterocephalus_glaber_male
ENSLOCG00000001409zcrb19754.378ENSHGLG00100017475-10050.450Heterocephalus_glaber_male
ENSLOCG00000001409zcrb110069.091ENSHGLG00100012202-10064.220Heterocephalus_glaber_male
ENSLOCG00000001409zcrb110078.082ENSHGLG00100019510-10073.516Heterocephalus_glaber_male
ENSLOCG00000001409zcrb18171.910ENSHGLG00100015818-10067.978Heterocephalus_glaber_male
ENSLOCG00000001409zcrb110079.186ENSHCOG00000009098zcrb110075.566Hippocampus_comes
ENSLOCG00000001409zcrb15987.500ENSIPUG00000017007zcrb18987.302Ictalurus_punctatus
ENSLOCG00000001409zcrb110079.545ENSSTOG00000023833-10080.455Ictidomys_tridecemlineatus
ENSLOCG00000001409zcrb17985.632ENSSTOG00000034477-10085.632Ictidomys_tridecemlineatus
ENSLOCG00000001409zcrb18074.576ENSJJAG00000012365-9775.287Jaculus_jaculus
ENSLOCG00000001409zcrb110079.545ENSJJAG00000021636-10079.545Jaculus_jaculus
ENSLOCG00000001409zcrb110068.349ENSJJAG00000023083-10066.055Jaculus_jaculus
ENSLOCG00000001409zcrb18161.017ENSJJAG00000020804-10061.582Jaculus_jaculus
ENSLOCG00000001409zcrb110084.091ENSKMAG00000012448zcrb110080.909Kryptolebias_marmoratus
ENSLOCG00000001409zcrb110081.250ENSLBEG00000004257zcrb110079.911Labrus_bergylta
ENSLOCG00000001409zcrb110059.729ENSLACG00000007970ZCRB110059.729Latimeria_chalumnae
ENSLOCG00000001409zcrb110080.000ENSLAFG00000008847ZCRB110080.000Loxodonta_africana
ENSLOCG00000001409zcrb110078.636ENSMFAG00000005490-10078.636Macaca_fascicularis
ENSLOCG00000001409zcrb18777.604ENSMFAG00000039789ZCRB110077.604Macaca_fascicularis
ENSLOCG00000001409zcrb15966.667ENSMFAG00000030462-7666.142Macaca_fascicularis
ENSLOCG00000001409zcrb19960.648ENSMMUG00000041598-9956.019Macaca_mulatta
ENSLOCG00000001409zcrb18178.090ENSMMUG00000017319ZCRB19978.090Macaca_mulatta
ENSLOCG00000001409zcrb16088.550ENSMNEG00000041890-8688.095Macaca_nemestrina
ENSLOCG00000001409zcrb110077.727ENSMNEG00000001077-10077.727Macaca_nemestrina
ENSLOCG00000001409zcrb19962.037ENSMNEG00000032137-9959.259Macaca_nemestrina
ENSLOCG00000001409zcrb19961.111ENSMLEG00000034590-9958.333Mandrillus_leucophaeus
ENSLOCG00000001409zcrb110079.545ENSMLEG00000042951ZCRB110079.545Mandrillus_leucophaeus
ENSLOCG00000001409zcrb110085.455ENSMAMG00000009034zcrb110085.455Mastacembelus_armatus
ENSLOCG00000001409zcrb110078.733ENSMZEG00005010889zcrb110079.186Maylandia_zebra
ENSLOCG00000001409zcrb110080.455ENSMGAG00000009450ZCRB110080.455Meleagris_gallopavo
ENSLOCG00000001409zcrb110077.169ENSMAUG00000009266Zcrb110080.365Mesocricetus_auratus
ENSLOCG00000001409zcrb110070.909ENSMICG00000026774-10072.273Microcebus_murinus
ENSLOCG00000001409zcrb110079.545ENSMICG00000017422-10080.455Microcebus_murinus
ENSLOCG00000001409zcrb110079.545ENSMOCG00000011009Zcrb110078.378Microtus_ochrogaster
ENSLOCG00000001409zcrb110076.256ENSMMOG00000002395zcrb110073.394Mola_mola
ENSLOCG00000001409zcrb110078.636ENSMODG00000006493-10076.818Monodelphis_domestica
ENSLOCG00000001409zcrb19271.782ENSMODG00000008893-9471.782Monodelphis_domestica
ENSLOCG00000001409zcrb110081.651ENSMALG00000016907zcrb18579.817Monopterus_albus
ENSLOCG00000001409zcrb110079.091MGP_CAROLIEiJ_G0020191Zcrb110080.000Mus_caroli
ENSLOCG00000001409zcrb110079.091ENSMUSG00000022635Zcrb110080.000Mus_musculus
ENSLOCG00000001409zcrb110080.000MGP_PahariEiJ_G0020195Zcrb110080.000Mus_pahari
ENSLOCG00000001409zcrb110079.091MGP_SPRETEiJ_G0021087Zcrb110080.000Mus_spretus
ENSLOCG00000001409zcrb110072.197ENSMPUG00000000901-10075.336Mustela_putorius_furo
ENSLOCG00000001409zcrb110058.515ENSMPUG00000005129-10058.952Mustela_putorius_furo
ENSLOCG00000001409zcrb110079.545ENSMPUG00000000327-10080.455Mustela_putorius_furo
ENSLOCG00000001409zcrb110075.229ENSMLUG00000026012-10074.312Myotis_lucifugus
ENSLOCG00000001409zcrb110079.091ENSMLUG00000001332-10080.000Myotis_lucifugus
ENSLOCG00000001409zcrb110076.364ENSMLUG00000029416-10077.273Myotis_lucifugus
ENSLOCG00000001409zcrb110079.545ENSNGAG00000020193Zcrb110080.000Nannospalax_galili
ENSLOCG00000001409zcrb110083.105ENSNBRG00000001430zcrb110081.279Neolamprologus_brichardi
ENSLOCG00000001409zcrb110079.545ENSNLEG00000017944ZCRB110079.545Nomascus_leucogenys
ENSLOCG00000001409zcrb18276.796ENSMEUG00000003563ZCRB110078.022Notamacropus_eugenii
ENSLOCG00000001409zcrb18777.604ENSOPRG00000011095ZCRB110078.125Ochotona_princeps
ENSLOCG00000001409zcrb18158.989ENSODEG00000000147-10058.427Octodon_degus
ENSLOCG00000001409zcrb19977.880ENSODEG00000018576-9373.733Octodon_degus
ENSLOCG00000001409zcrb110070.183ENSODEG00000007573-10066.055Octodon_degus
ENSLOCG00000001409zcrb110076.712ENSODEG00000003051-10072.603Octodon_degus
ENSLOCG00000001409zcrb110076.712ENSODEG00000019971-10073.516Octodon_degus
ENSLOCG00000001409zcrb110081.532ENSONIG00000016844zcrb110077.477Oreochromis_niloticus
ENSLOCG00000001409zcrb110079.091ENSOANG00000009891ZCRB110078.182Ornithorhynchus_anatinus
ENSLOCG00000001409zcrb110071.101ENSOCUG00000026539-10070.642Oryctolagus_cuniculus
ENSLOCG00000001409zcrb18368.132ENSOCUG00000013664-10070.879Oryctolagus_cuniculus
ENSLOCG00000001409zcrb19979.817ENSORLG00000013088zcrb19879.263Oryzias_latipes
ENSLOCG00000001409zcrb19980.275ENSORLG00020019676zcrb19879.724Oryzias_latipes_hni
ENSLOCG00000001409zcrb19980.275ENSORLG00015017998zcrb18379.724Oryzias_latipes_hsok
ENSLOCG00000001409zcrb110079.091ENSOMEG00000011896zcrb110079.545Oryzias_melastigma
ENSLOCG00000001409zcrb110067.431ENSOGAG00000031462-10066.972Otolemur_garnettii
ENSLOCG00000001409zcrb110075.909ENSOGAG00000026881-10076.818Otolemur_garnettii
ENSLOCG00000001409zcrb110081.364ENSOGAG00000013178-10080.000Otolemur_garnettii
ENSLOCG00000001409zcrb110079.091ENSOARG00000004530-10080.000Ovis_aries
ENSLOCG00000001409zcrb110079.091ENSOARG00000019797-10080.000Ovis_aries
ENSLOCG00000001409zcrb110078.636ENSOARG00000000782-10079.545Ovis_aries
ENSLOCG00000001409zcrb110079.545ENSPPAG00000030593ZCRB110079.545Pan_paniscus
ENSLOCG00000001409zcrb110059.276ENSPPAG00000041848-10060.455Pan_paniscus
ENSLOCG00000001409zcrb110079.545ENSPPRG00000003066-10080.455Panthera_pardus
ENSLOCG00000001409zcrb110079.545ENSPTIG00000018037ZCRB110080.455Panthera_tigris_altaica
ENSLOCG00000001409zcrb110079.545ENSPTRG00000004838ZCRB110079.545Pan_troglodytes
ENSLOCG00000001409zcrb110058.824ENSPTRG00000045111-10059.545Pan_troglodytes
ENSLOCG00000001409zcrb19962.212ENSPANG00000031708-9961.290Papio_anubis
ENSLOCG00000001409zcrb110079.545ENSPANG00000010274ZCRB110079.545Papio_anubis
ENSLOCG00000001409zcrb110088.532ENSPKIG00000006587zcrb110088.532Paramormyrops_kingsleyae
ENSLOCG00000001409zcrb110082.273ENSPSIG00000014606ZCRB110082.273Pelodiscus_sinensis
ENSLOCG00000001409zcrb110081.448ENSPMGG00000007605zcrb110076.471Periophthalmus_magnuspinnatus
ENSLOCG00000001409zcrb110079.545ENSPEMG00000005293Zcrb110079.545Peromyscus_maniculatus_bairdii
ENSLOCG00000001409zcrb18967.005ENSPMAG00000001258zcrb19966.667Petromyzon_marinus
ENSLOCG00000001409zcrb110078.636ENSPCIG00000029300-10078.636Phascolarctos_cinereus
ENSLOCG00000001409zcrb110081.818ENSPFOG00000015564zcrb110082.273Poecilia_formosa
ENSLOCG00000001409zcrb110081.364ENSPLAG00000004685zcrb110081.818Poecilia_latipinna
ENSLOCG00000001409zcrb110081.818ENSPMEG00000005524zcrb110082.273Poecilia_mexicana
ENSLOCG00000001409zcrb110076.256ENSPREG00000011402zcrb110073.516Poecilia_reticulata
ENSLOCG00000001409zcrb110079.091ENSPPYG00000004422ZCRB110079.091Pongo_abelii
ENSLOCG00000001409zcrb110079.091ENSPCAG00000011749ZCRB110079.091Procavia_capensis
ENSLOCG00000001409zcrb110079.091ENSPCOG00000022958ZCRB110080.000Propithecus_coquereli
ENSLOCG00000001409zcrb18378.571ENSPVAG00000006651ZCRB19681.250Pteropus_vampyrus
ENSLOCG00000001409zcrb110082.648ENSPNYG00000008344zcrb110080.822Pundamilia_nyererei
ENSLOCG00000001409zcrb110081.651ENSPNAG00000023955zcrb110081.651Pygocentrus_nattereri
ENSLOCG00000001409zcrb110079.545ENSRNOG00000004996Zcrb110079.545Rattus_norvegicus
ENSLOCG00000001409zcrb110079.091ENSRBIG00000042559ZCRB110079.091Rhinopithecus_bieti
ENSLOCG00000001409zcrb110079.545ENSRROG00000033546ZCRB110079.545Rhinopithecus_roxellana
ENSLOCG00000001409zcrb110079.545ENSSBOG00000019523ZCRB110079.545Saimiri_boliviensis_boliviensis
ENSLOCG00000001409zcrb15974.219ENSSBOG00000022234-7773.984Saimiri_boliviensis_boliviensis
ENSLOCG00000001409zcrb110079.091ENSSHAG00000006273ZCRB110079.091Sarcophilus_harrisii
ENSLOCG00000001409zcrb110084.932ENSSFOG00015005150zcrb110084.475Scleropages_formosus
ENSLOCG00000001409zcrb110079.464ENSSMAG00000020477zcrb110077.232Scophthalmus_maximus
ENSLOCG00000001409zcrb110082.589ENSSDUG00000007140zcrb110079.464Seriola_dumerili
ENSLOCG00000001409zcrb110080.909ENSSLDG00000012143zcrb110078.636Seriola_lalandi_dorsalis
ENSLOCG00000001409zcrb18771.875ENSSARG00000000492ZCRB110071.875Sorex_araneus
ENSLOCG00000001409zcrb18178.771ENSSPUG00000009960ZCRB110078.771Sphenodon_punctatus
ENSLOCG00000001409zcrb110083.482ENSSPAG00000013412zcrb110081.250Stegastes_partitus
ENSLOCG00000001409zcrb110079.545ENSSSCG00000034066-10080.000Sus_scrofa
ENSLOCG00000001409zcrb110059.633ENSSSCG00000033618-10058.716Sus_scrofa
ENSLOCG00000001409zcrb110079.091ENSTGUG00000005829ZCRB110079.452Taeniopygia_guttata
ENSLOCG00000001409zcrb110080.455ENSTRUG00000016764zcrb110078.182Takifugu_rubripes
ENSLOCG00000001409zcrb110074.439ENSTNIG00000018504zcrb110073.756Tetraodon_nigroviridis
ENSLOCG00000001409zcrb110067.727ENSTBEG00000008097ZCRB110066.818Tupaia_belangeri
ENSLOCG00000001409zcrb110078.636ENSTTRG00000001378ZCRB110079.545Tursiops_truncatus
ENSLOCG00000001409zcrb110080.000ENSUMAG00000024199ZCRB110080.909Ursus_maritimus
ENSLOCG00000001409zcrb110079.091ENSVPAG00000012040ZCRB110079.091Vicugna_pacos
ENSLOCG00000001409zcrb110079.091ENSVVUG00000016801ZCRB110080.000Vulpes_vulpes
ENSLOCG00000001409zcrb110081.818ENSXETG00000006796zcrb110081.818Xenopus_tropicalis
ENSLOCG00000001409zcrb16885.135ENSXCOG00000014895zcrb18587.302Xiphophorus_couchianus
ENSLOCG00000001409zcrb110081.279ENSXMAG00000009359zcrb110081.735Xiphophorus_maculatus

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