EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000001612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 22441 bases
Position: chrLG12:2973204-2995644
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001857	PARP	PF00644.20	2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001862	-	9609	-	ENSLOCP00000001857	1704 (aa)	-	W5M0F0

Gene Model

Click here to download ENSLOCG00000001612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000001612	-	92	32.798	ENSLOCG00000003463	-	87	32.798
ENSLOCG00000001612	-	91	31.418	ENSLOCG00000003430	si:ch211-219a4.3	88	31.549

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001612	-	89	32.160	ENSAPOG00000006513	si:ch211-219a4.3	89	32.255	Acanthochromis_polyacanthus
ENSLOCG00000001612	-	96	31.340	ENSACIG00000004252	si:ch211-219a4.3	99	30.159	Amphilophus_citrinellus
ENSLOCG00000001612	-	96	31.954	ENSACIG00000003944	si:ch211-219a4.3	93	43.860	Amphilophus_citrinellus
ENSLOCG00000001612	-	96	31.749	ENSAOCG00000012848	si:ch211-219a4.3	90	32.150	Amphiprion_ocellaris
ENSLOCG00000001612	-	96	31.529	ENSAPEG00000006205	si:ch211-219a4.3	91	31.814	Amphiprion_percula
ENSLOCG00000001612	-	93	30.762	ENSATEG00000010770	si:ch211-219a4.3	90	30.792	Anabas_testudineus
ENSLOCG00000001612	-	96	30.323	ENSACAG00000009769	-	91	30.323	Anolis_carolinensis
ENSLOCG00000001612	-	99	30.419	ENSACLG00000005450	si:ch211-219a4.3	96	30.446	Astatotilapia_calliptera
ENSLOCG00000001612	-	52	30.737	ENSAMXG00000043329	-	99	30.737	Astyanax_mexicanus
ENSLOCG00000001612	-	52	33.245	ENSAMXG00000035876	si:cabz01030277.1	53	33.245	Astyanax_mexicanus
ENSLOCG00000001612	-	52	32.497	ENSAMXG00000031852	-	99	32.497	Astyanax_mexicanus
ENSLOCG00000001612	-	72	41.206	ENSBTAG00000016656	PARP14	81	41.206	Bos_taurus
ENSLOCG00000001612	-	94	30.477	ENSCAFG00000011970	PARP14	92	30.535	Canis_familiaris
ENSLOCG00000001612	-	94	30.739	ENSCAFG00020005495	PARP14	92	30.563	Canis_lupus_dingo
ENSLOCG00000001612	-	83	30.137	ENSCHOG00000010569	PARP14	80	32.520	Choloepus_hoffmanni
ENSLOCG00000001612	-	92	30.740	ENSCPBG00000013908	-	88	30.740	Chrysemys_picta_bellii
ENSLOCG00000001612	-	83	30.376	ENSCSEG00000017936	si:ch211-219a4.3	96	37.126	Cynoglossus_semilaevis
ENSLOCG00000001612	-	97	31.232	ENSCVAG00000008369	si:ch211-219a4.3	91	31.775	Cyprinodon_variegatus
ENSLOCG00000001612	-	56	30.420	ENSDARG00000100612	si:ch211-163c2.1	60	30.420	Danio_rerio
ENSLOCG00000001612	-	95	32.298	ENSDARG00000040445	si:ch211-219a4.3	99	34.615	Danio_rerio
ENSLOCG00000001612	-	84	32.231	ENSETEG00000002790	PARP14	82	32.231	Echinops_telfairi
ENSLOCG00000001612	-	92	30.097	ENSECAG00000024988	PARP14	86	33.571	Equus_caballus
ENSLOCG00000001612	-	82	30.095	ENSEEUG00000002136	PARP14	85	30.095	Erinaceus_europaeus
ENSLOCG00000001612	-	80	32.341	ENSELUG00000009798	si:ch211-219a4.3	91	32.341	Esox_lucius
ENSLOCG00000001612	-	88	40.407	ENSGMOG00000011231	-	97	61.818	Gadus_morhua
ENSLOCG00000001612	-	87	30.888	ENSGAFG00000009879	si:ch211-219a4.3	99	33.429	Gambusia_affinis
ENSLOCG00000001612	-	99	31.654	ENSGACG00000002353	si:ch211-219a4.3	99	40.404	Gasterosteus_aculeatus
ENSLOCG00000001612	-	82	30.777	ENSGAGG00000000808	-	85	30.777	Gopherus_agassizii
ENSLOCG00000001612	-	86	38.272	ENSGAGG00000017725	-	81	38.272	Gopherus_agassizii
ENSLOCG00000001612	-	95	30.998	ENSKMAG00000019118	si:ch211-219a4.3	92	31.094	Kryptolebias_marmoratus
ENSLOCG00000001612	-	94	30.920	ENSMAMG00000012417	si:ch211-219a4.3	90	31.281	Mastacembelus_armatus
ENSLOCG00000001612	-	99	30.489	ENSMZEG00005016195	si:ch211-219a4.3	96	30.446	Maylandia_zebra
ENSLOCG00000001612	-	52	32.479	ENSMZEG00005025678	si:ch211-219a4.3	98	44.444	Maylandia_zebra
ENSLOCG00000001612	-	51	42.932	ENSMZEG00005025708	-	96	42.932	Maylandia_zebra
ENSLOCG00000001612	-	87	30.769	ENSMGAG00000012246	-	88	30.769	Meleagris_gallopavo
ENSLOCG00000001612	-	58	30.875	ENSMOCG00000021121	Parp14	58	30.875	Microtus_ochrogaster
ENSLOCG00000001612	-	94	30.372	ENSMPUG00000004629	PARP14	88	30.372	Mustela_putorius_furo
ENSLOCG00000001612	-	50	33.755	ENSORLG00000008781	-	99	33.755	Oryzias_latipes
ENSLOCG00000001612	-	99	31.477	ENSORLG00015021971	si:ch211-219a4.3	100	33.688	Oryzias_latipes_hsok
ENSLOCG00000001612	-	89	30.612	ENSOMEG00000019715	si:ch211-219a4.3	93	42.400	Oryzias_melastigma
ENSLOCG00000001612	-	78	30.982	ENSOGAG00000012454	PARP14	70	30.982	Otolemur_garnettii
ENSLOCG00000001612	-	60	34.225	ENSPKIG00000004027	-	97	36.313	Paramormyrops_kingsleyae
ENSLOCG00000001612	-	95	30.402	ENSPSIG00000003516	PARP14	89	30.402	Pelodiscus_sinensis
ENSLOCG00000001612	-	84	31.316	ENSPMAG00000001173	-	76	31.579	Petromyzon_marinus
ENSLOCG00000001612	-	94	31.274	ENSPFOG00000016743	si:ch211-219a4.3	90	31.274	Poecilia_formosa
ENSLOCG00000001612	-	94	30.277	ENSPLAG00000023145	si:ch211-219a4.3	90	30.277	Poecilia_latipinna
ENSLOCG00000001612	-	94	30.019	ENSPMEG00000000483	si:ch211-219a4.3	90	30.210	Poecilia_mexicana
ENSLOCG00000001612	-	53	30.938	ENSPREG00000019182	-	99	31.562	Poecilia_reticulata
ENSLOCG00000001612	-	51	32.164	ENSPREG00000019242	-	100	32.164	Poecilia_reticulata
ENSLOCG00000001612	-	62	45.752	ENSPCAG00000005805	-	58	45.752	Procavia_capensis
ENSLOCG00000001612	-	92	30.502	ENSPCOG00000007904	PARP14	87	30.502	Propithecus_coquereli
ENSLOCG00000001612	-	90	30.997	ENSPNYG00000001481	si:ch211-219a4.3	90	30.997	Pundamilia_nyererei
ENSLOCG00000001612	-	52	32.618	ENSPNYG00000013937	-	98	45.455	Pundamilia_nyererei
ENSLOCG00000001612	-	81	31.728	ENSPNAG00000028188	si:ch211-219a4.3	85	31.728	Pygocentrus_nattereri
ENSLOCG00000001612	-	91	32.807	ENSSFOG00015001605	-	97	51.634	Scleropages_formosus
ENSLOCG00000001612	-	95	31.503	ENSSMAG00000003869	si:ch211-219a4.3	91	31.503	Scophthalmus_maximus
ENSLOCG00000001612	-	95	30.740	ENSSDUG00000009289	si:ch211-219a4.3	91	30.836	Seriola_dumerili
ENSLOCG00000001612	-	59	31.333	ENSSDUG00000007589	-	64	31.333	Seriola_dumerili
ENSLOCG00000001612	-	95	31.124	ENSSLDG00000020946	si:ch211-219a4.3	91	31.220	Seriola_lalandi_dorsalis
ENSLOCG00000001612	-	81	30.625	ENSSARG00000011299	PARP14	80	30.417	Sorex_araneus
ENSLOCG00000001612	-	85	31.077	ENSSPUG00000016301	-	88	31.077	Sphenodon_punctatus
ENSLOCG00000001612	-	96	31.369	ENSSPAG00000009605	si:ch211-219a4.3	92	31.469	Stegastes_partitus
ENSLOCG00000001612	-	52	31.863	ENSTRUG00000004579	-	94	45.161	Takifugu_rubripes
ENSLOCG00000001612	-	69	43.147	ENSVPAG00000002158	PARP14	69	43.147	Vicugna_pacos
ENSLOCG00000001612	-	94	30.507	ENSVVUG00000022533	PARP14	88	33.508	Vulpes_vulpes
ENSLOCG00000001612	-	54	45.763	ENSXETG00000023400	-	97	45.763	Xenopus_tropicalis
ENSLOCG00000001612	-	63	31.788	ENSXETG00000023401	-	67	31.788	Xenopus_tropicalis
ENSLOCG00000001612	-	92	30.288	ENSXETG00000023399	parp14.2	87	30.288	Xenopus_tropicalis
ENSLOCG00000001612	-	51	32.174	ENSXCOG00000014707	-	92	44.800	Xiphophorus_couchianus
ENSLOCG00000001612	-	94	30.418	ENSXMAG00000026293	-	91	30.682	Xiphophorus_maculatus
ENSLOCG00000001612	-	94	30.740	ENSXMAG00000026958	si:ch211-219a4.3	90	30.828	Xiphophorus_maculatus
ENSLOCG00000001612	-	94	30.497	ENSXMAG00000007367	si:ch211-219a4.3	90	30.497	Xiphophorus_maculatus