EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000001652 (Gene tree)
Gene ID: 102697305
Gene Symbol: riok3
Alias: fb10c11|wu:fb10c11|zgc:100972
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 10955 bases
Position: chrLG9:212634-223588
Accession: 102697305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000001944	RIO1	PF01163.22	4.8e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000001949	-	2694	XM_006633945	ENSLOCP00000001944	511 (aa)	XP_015208974	W5M0N7

Gene Model

Click here to download ENSLOCG00000001652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000001652	riok3	63	42.249	ENSLOCG00000011728	riok1	56	42.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001652	riok3	100	77.308	ENSG00000101782	RIOK3	100	77.308	Homo_sapiens
ENSLOCG00000001652	riok3	100	74.369	ENSAPOG00000020861	riok3	99	74.369	Acanthochromis_polyacanthus
ENSLOCG00000001652	riok3	100	77.308	ENSAMEG00000013754	RIOK3	85	77.308	Ailuropoda_melanoleuca
ENSLOCG00000001652	riok3	99	77.193	ENSACIG00000019894	riok3	99	77.193	Amphilophus_citrinellus
ENSLOCG00000001652	riok3	100	76.117	ENSAOCG00000007172	riok3	99	77.640	Amphiprion_ocellaris
ENSLOCG00000001652	riok3	100	75.922	ENSAPEG00000002536	riok3	99	77.019	Amphiprion_percula
ENSLOCG00000001652	riok3	99	76.218	ENSATEG00000018303	riok3	98	78.093	Anabas_testudineus
ENSLOCG00000001652	riok3	96	79.678	ENSAPLG00000006497	RIOK3	96	79.678	Anas_platyrhynchos
ENSLOCG00000001652	riok3	99	76.311	ENSACAG00000000159	RIOK3	99	76.311	Anolis_carolinensis
ENSLOCG00000001652	riok3	100	57.361	ENSANAG00000030146	RIOK3	100	57.361	Aotus_nancymaae
ENSLOCG00000001652	riok3	93	79.707	ENSACLG00000018966	riok3	98	79.707	Astatotilapia_calliptera
ENSLOCG00000001652	riok3	97	78.068	ENSAMXG00000015617	riok3	99	77.344	Astyanax_mexicanus
ENSLOCG00000001652	riok3	100	77.115	ENSBTAG00000010042	RIOK3	100	77.115	Bos_taurus
ENSLOCG00000001652	riok3	94	35.785	WBGene00014012	riok-3	94	35.785	Caenorhabditis_elegans
ENSLOCG00000001652	riok3	100	77.308	ENSCJAG00000020556	RIOK3	100	77.308	Callithrix_jacchus
ENSLOCG00000001652	riok3	100	77.500	ENSCAFG00000018201	RIOK3	100	77.500	Canis_familiaris
ENSLOCG00000001652	riok3	99	77.713	ENSCAFG00020014801	RIOK3	99	81.951	Canis_lupus_dingo
ENSLOCG00000001652	riok3	100	76.923	ENSCHIG00000009312	RIOK3	99	78.715	Capra_hircus
ENSLOCG00000001652	riok3	100	76.923	ENSTSYG00000000142	RIOK3	99	78.795	Carlito_syrichta
ENSLOCG00000001652	riok3	95	78.093	ENSCAPG00000005756	RIOK3	99	78.093	Cavia_aperea
ENSLOCG00000001652	riok3	99	77.176	ENSCPOG00000007991	RIOK3	99	77.176	Cavia_porcellus
ENSLOCG00000001652	riok3	100	77.308	ENSCCAG00000028338	RIOK3	99	77.282	Cebus_capucinus
ENSLOCG00000001652	riok3	100	76.923	ENSCATG00000040824	RIOK3	100	76.923	Cercocebus_atys
ENSLOCG00000001652	riok3	99	76.893	ENSCLAG00000006767	RIOK3	99	76.893	Chinchilla_lanigera
ENSLOCG00000001652	riok3	100	76.923	ENSCSAG00000017680	RIOK3	100	76.923	Chlorocebus_sabaeus
ENSLOCG00000001652	riok3	88	76.103	ENSCHOG00000008343	RIOK3	87	76.103	Choloepus_hoffmanni
ENSLOCG00000001652	riok3	99	79.767	ENSCPBG00000027226	RIOK3	99	79.767	Chrysemys_picta_bellii
ENSLOCG00000001652	riok3	96	49.326	ENSCSAVG00000003068	-	99	51.860	Ciona_savignyi
ENSLOCG00000001652	riok3	80	77.507	ENSCANG00000035939	RIOK3	95	77.507	Colobus_angolensis_palliatus
ENSLOCG00000001652	riok3	99	76.596	ENSCGRG00001013249	Riok3	99	76.596	Cricetulus_griseus_chok1gshd
ENSLOCG00000001652	riok3	99	76.209	ENSCGRG00000017636	Riok3	99	76.209	Cricetulus_griseus_crigri
ENSLOCG00000001652	riok3	99	75.049	ENSCSEG00000018289	riok3	99	76.939	Cynoglossus_semilaevis
ENSLOCG00000001652	riok3	99	74.464	ENSCVAG00000011848	riok3	99	74.464	Cyprinodon_variegatus
ENSLOCG00000001652	riok3	100	78.641	ENSDARG00000042751	riok3	99	78.641	Danio_rerio
ENSLOCG00000001652	riok3	100	78.077	ENSDNOG00000039433	RIOK3	100	78.077	Dasypus_novemcinctus
ENSLOCG00000001652	riok3	99	76.983	ENSDORG00000011663	Riok3	99	76.983	Dipodomys_ordii
ENSLOCG00000001652	riok3	90	41.445	FBgn0031643	CG3008	86	41.445	Drosophila_melanogaster
ENSLOCG00000001652	riok3	93	76.701	ENSETEG00000003689	RIOK3	100	76.701	Echinops_telfairi
ENSLOCG00000001652	riok3	96	54.326	ENSEBUG00000000555	riok3	98	54.326	Eptatretus_burgeri
ENSLOCG00000001652	riok3	96	78.313	ENSEASG00005002317	RIOK3	97	78.313	Equus_asinus_asinus
ENSLOCG00000001652	riok3	96	78.313	ENSECAG00000009028	RIOK3	97	78.313	Equus_caballus
ENSLOCG00000001652	riok3	96	64.056	ENSEEUG00000007005	RIOK3	99	64.056	Erinaceus_europaeus
ENSLOCG00000001652	riok3	100	76.803	ENSELUG00000017655	riok3	99	76.803	Esox_lucius
ENSLOCG00000001652	riok3	100	77.308	ENSFCAG00000000517	RIOK3	100	77.308	Felis_catus
ENSLOCG00000001652	riok3	97	79.760	ENSFALG00000006145	RIOK3	100	78.143	Ficedula_albicollis
ENSLOCG00000001652	riok3	99	76.448	ENSFDAG00000001548	RIOK3	99	76.448	Fukomys_damarensis
ENSLOCG00000001652	riok3	99	76.125	ENSFHEG00000011350	riok3	99	75.875	Fundulus_heteroclitus
ENSLOCG00000001652	riok3	88	76.703	ENSGMOG00000005157	riok3	98	76.703	Gadus_morhua
ENSLOCG00000001652	riok3	97	79.359	ENSGALG00000015004	RIOK3	100	77.950	Gallus_gallus
ENSLOCG00000001652	riok3	92	64.544	ENSGAFG00000002403	riok3	89	64.544	Gambusia_affinis
ENSLOCG00000001652	riok3	99	74.855	ENSGACG00000000880	riok3	99	74.855	Gasterosteus_aculeatus
ENSLOCG00000001652	riok3	100	78.447	ENSGAGG00000024785	RIOK3	100	78.447	Gopherus_agassizii
ENSLOCG00000001652	riok3	56	77.740	ENSGGOG00000036734	-	94	77.740	Gorilla_gorilla
ENSLOCG00000001652	riok3	99	76.863	ENSHBUG00000003233	riok3	99	76.863	Haplochromis_burtoni
ENSLOCG00000001652	riok3	99	76.641	ENSHGLG00000003885	RIOK3	99	76.641	Heterocephalus_glaber_female
ENSLOCG00000001652	riok3	99	76.641	ENSHGLG00100002077	RIOK3	99	76.641	Heterocephalus_glaber_male
ENSLOCG00000001652	riok3	99	73.805	ENSHCOG00000006794	riok3	99	73.805	Hippocampus_comes
ENSLOCG00000001652	riok3	100	76.908	ENSIPUG00000001406	Riok3	99	76.908	Ictalurus_punctatus
ENSLOCG00000001652	riok3	100	76.731	ENSSTOG00000006517	RIOK3	100	76.731	Ictidomys_tridecemlineatus
ENSLOCG00000001652	riok3	99	75.908	ENSJJAG00000023689	Riok3	99	75.908	Jaculus_jaculus
ENSLOCG00000001652	riok3	99	75.439	ENSKMAG00000007259	riok3	99	75.439	Kryptolebias_marmoratus
ENSLOCG00000001652	riok3	99	74.951	ENSLBEG00000013689	riok3	99	74.951	Labrus_bergylta
ENSLOCG00000001652	riok3	99	76.667	ENSLACG00000017326	RIOK3	99	76.667	Latimeria_chalumnae
ENSLOCG00000001652	riok3	100	77.735	ENSLAFG00000001380	RIOK3	100	77.735	Loxodonta_africana
ENSLOCG00000001652	riok3	99	77.369	ENSMMUG00000021478	RIOK3	96	80.516	Macaca_mulatta
ENSLOCG00000001652	riok3	100	64.615	ENSMNEG00000041106	RIOK3	100	64.615	Macaca_nemestrina
ENSLOCG00000001652	riok3	100	77.115	ENSMLEG00000028187	RIOK3	100	77.115	Mandrillus_leucophaeus
ENSLOCG00000001652	riok3	96	78.296	ENSMAMG00000008502	riok3	97	78.296	Mastacembelus_armatus
ENSLOCG00000001652	riok3	99	77.255	ENSMZEG00005020212	riok3	99	77.255	Maylandia_zebra
ENSLOCG00000001652	riok3	99	77.457	ENSMGAG00000010079	RIOK3	100	77.457	Meleagris_gallopavo
ENSLOCG00000001652	riok3	99	76.357	ENSMAUG00000020527	Riok3	99	76.357	Mesocricetus_auratus
ENSLOCG00000001652	riok3	100	78.077	ENSMICG00000009293	RIOK3	100	77.885	Microcebus_murinus
ENSLOCG00000001652	riok3	99	75.340	ENSMOCG00000012114	Riok3	96	75.340	Microtus_ochrogaster
ENSLOCG00000001652	riok3	94	75.311	ENSMMOG00000019204	riok3	99	75.311	Mola_mola
ENSLOCG00000001652	riok3	100	78.503	ENSMODG00000021496	RIOK3	100	78.503	Monodelphis_domestica
ENSLOCG00000001652	riok3	99	75.538	ENSMALG00000020848	riok3	99	75.538	Monopterus_albus
ENSLOCG00000001652	riok3	100	76.154	MGP_CAROLIEiJ_G0022001	Riok3	100	76.154	Mus_caroli
ENSLOCG00000001652	riok3	100	76.346	ENSMUSG00000024404	Riok3	100	92.857	Mus_musculus
ENSLOCG00000001652	riok3	100	76.154	MGP_PahariEiJ_G0018739	Riok3	100	76.154	Mus_pahari
ENSLOCG00000001652	riok3	100	77.500	ENSMPUG00000005772	RIOK3	100	77.500	Mustela_putorius_furo
ENSLOCG00000001652	riok3	99	76.493	ENSMLUG00000007081	RIOK3	99	76.493	Myotis_lucifugus
ENSLOCG00000001652	riok3	100	76.731	ENSNGAG00000011446	Riok3	100	76.731	Nannospalax_galili
ENSLOCG00000001652	riok3	76	76.812	ENSNBRG00000016677	riok3	84	76.812	Neolamprologus_brichardi
ENSLOCG00000001652	riok3	100	77.115	ENSNLEG00000006758	RIOK3	100	77.115	Nomascus_leucogenys
ENSLOCG00000001652	riok3	100	77.159	ENSMEUG00000006292	RIOK3	100	77.159	Notamacropus_eugenii
ENSLOCG00000001652	riok3	99	76.596	ENSOPRG00000004803	RIOK3	99	76.596	Ochotona_princeps
ENSLOCG00000001652	riok3	99	76.448	ENSODEG00000006444	RIOK3	99	76.448	Octodon_degus
ENSLOCG00000001652	riok3	95	76.923	ENSONIG00000013422	riok3	99	76.923	Oreochromis_niloticus
ENSLOCG00000001652	riok3	94	80.082	ENSOANG00000012074	RIOK3	99	80.082	Ornithorhynchus_anatinus
ENSLOCG00000001652	riok3	100	76.923	ENSOCUG00000016820	RIOK3	100	76.923	Oryctolagus_cuniculus
ENSLOCG00000001652	riok3	99	74.803	ENSORLG00000003395	riok3	99	74.803	Oryzias_latipes
ENSLOCG00000001652	riok3	99	75.000	ENSORLG00020000672	riok3	99	75.000	Oryzias_latipes_hni
ENSLOCG00000001652	riok3	99	74.803	ENSORLG00015007372	riok3	99	74.803	Oryzias_latipes_hsok
ENSLOCG00000001652	riok3	99	74.951	ENSOMEG00000001380	riok3	99	74.951	Oryzias_melastigma
ENSLOCG00000001652	riok3	100	77.885	ENSOGAG00000014502	RIOK3	90	77.885	Otolemur_garnettii
ENSLOCG00000001652	riok3	100	76.923	ENSOARG00000008042	RIOK3	100	76.923	Ovis_aries
ENSLOCG00000001652	riok3	100	77.500	ENSPPAG00000030258	RIOK3	100	77.500	Pan_paniscus
ENSLOCG00000001652	riok3	100	77.115	ENSPPRG00000023302	RIOK3	100	77.115	Panthera_pardus
ENSLOCG00000001652	riok3	100	77.308	ENSPTIG00000000960	RIOK3	100	77.308	Panthera_tigris_altaica
ENSLOCG00000001652	riok3	100	77.308	ENSPTRG00000009918	RIOK3	100	77.308	Pan_troglodytes
ENSLOCG00000001652	riok3	100	77.115	ENSPANG00000011485	RIOK3	100	77.115	Papio_anubis
ENSLOCG00000001652	riok3	100	83.953	ENSPKIG00000018297	riok3	99	83.953	Paramormyrops_kingsleyae
ENSLOCG00000001652	riok3	99	77.326	ENSPSIG00000006250	RIOK3	99	77.326	Pelodiscus_sinensis
ENSLOCG00000001652	riok3	93	75.262	ENSPMGG00000009414	riok3	99	75.262	Periophthalmus_magnuspinnatus
ENSLOCG00000001652	riok3	99	76.448	ENSPEMG00000023794	Riok3	99	76.448	Peromyscus_maniculatus_bairdii
ENSLOCG00000001652	riok3	83	72.535	ENSPMAG00000003258	riok3	97	72.535	Petromyzon_marinus
ENSLOCG00000001652	riok3	93	79.876	ENSPCIG00000013991	RIOK3	100	79.876	Phascolarctos_cinereus
ENSLOCG00000001652	riok3	97	74.900	ENSPFOG00000024127	riok3	99	74.314	Poecilia_formosa
ENSLOCG00000001652	riok3	97	75.100	ENSPLAG00000004956	riok3	99	74.510	Poecilia_latipinna
ENSLOCG00000001652	riok3	97	74.900	ENSPMEG00000020108	riok3	99	74.314	Poecilia_mexicana
ENSLOCG00000001652	riok3	100	74.514	ENSPREG00000010010	riok3	100	74.514	Poecilia_reticulata
ENSLOCG00000001652	riok3	100	71.676	ENSPPYG00000009062	RIOK3	100	71.676	Pongo_abelii
ENSLOCG00000001652	riok3	77	76.384	ENSPCAG00000001021	RIOK3	76	76.384	Procavia_capensis
ENSLOCG00000001652	riok3	100	77.885	ENSPCOG00000022631	RIOK3	100	77.885	Propithecus_coquereli
ENSLOCG00000001652	riok3	100	64.231	ENSPVAG00000015817	RIOK3	100	64.231	Pteropus_vampyrus
ENSLOCG00000001652	riok3	99	77.059	ENSPNYG00000003271	riok3	99	77.059	Pundamilia_nyererei
ENSLOCG00000001652	riok3	100	77.344	ENSPNAG00000006213	riok3	99	77.344	Pygocentrus_nattereri
ENSLOCG00000001652	riok3	99	76.402	ENSRNOG00000023376	Riok3	99	76.402	Rattus_norvegicus
ENSLOCG00000001652	riok3	100	76.731	ENSRBIG00000035071	RIOK3	100	76.731	Rhinopithecus_bieti
ENSLOCG00000001652	riok3	100	76.731	ENSRROG00000045710	RIOK3	100	76.731	Rhinopithecus_roxellana
ENSLOCG00000001652	riok3	100	77.308	ENSSBOG00000034387	RIOK3	100	77.308	Saimiri_boliviensis_boliviensis
ENSLOCG00000001652	riok3	100	78.119	ENSSHAG00000011854	RIOK3	100	78.119	Sarcophilus_harrisii
ENSLOCG00000001652	riok3	100	81.359	ENSSFOG00015012912	riok3	98	83.265	Scleropages_formosus
ENSLOCG00000001652	riok3	99	76.712	ENSSMAG00000011527	riok3	99	76.712	Scophthalmus_maximus
ENSLOCG00000001652	riok3	99	77.432	ENSSDUG00000016018	riok3	99	77.626	Seriola_dumerili
ENSLOCG00000001652	riok3	59	85.976	ENSSLDG00000022246	riok3	93	80.556	Seriola_lalandi_dorsalis
ENSLOCG00000001652	riok3	88	76.471	ENSSARG00000010154	RIOK3	87	76.471	Sorex_araneus
ENSLOCG00000001652	riok3	99	79.612	ENSSPUG00000015246	RIOK3	99	79.612	Sphenodon_punctatus
ENSLOCG00000001652	riok3	100	76.699	ENSSPAG00000000601	riok3	99	76.699	Stegastes_partitus
ENSLOCG00000001652	riok3	100	77.115	ENSSSCG00000029518	RIOK3	100	82.313	Sus_scrofa
ENSLOCG00000001652	riok3	97	78.884	ENSTGUG00000010392	RIOK3	100	77.308	Taeniopygia_guttata
ENSLOCG00000001652	riok3	99	75.391	ENSTRUG00000007055	riok3	99	75.391	Takifugu_rubripes
ENSLOCG00000001652	riok3	93	71.608	ENSTNIG00000001855	riok3	99	71.608	Tetraodon_nigroviridis
ENSLOCG00000001652	riok3	54	83.333	ENSTBEG00000015851	RIOK3	53	83.333	Tupaia_belangeri
ENSLOCG00000001652	riok3	100	76.923	ENSTTRG00000008839	RIOK3	100	76.923	Tursiops_truncatus
ENSLOCG00000001652	riok3	100	77.115	ENSUAMG00000018410	RIOK3	100	77.115	Ursus_americanus
ENSLOCG00000001652	riok3	99	77.583	ENSUMAG00000020218	RIOK3	97	77.344	Ursus_maritimus
ENSLOCG00000001652	riok3	100	77.115	ENSVPAG00000009034	RIOK3	100	77.115	Vicugna_pacos
ENSLOCG00000001652	riok3	100	77.500	ENSVVUG00000003651	RIOK3	76	77.500	Vulpes_vulpes
ENSLOCG00000001652	riok3	99	72.481	ENSXETG00000027370	riok3	99	72.481	Xenopus_tropicalis
ENSLOCG00000001652	riok3	95	74.694	ENSXCOG00000001032	riok3	99	74.694	Xiphophorus_couchianus
ENSLOCG00000001652	riok3	99	73.922	ENSXMAG00000012902	riok3	99	73.922	Xiphophorus_maculatus