EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001758 (Gene tree)
Gene ID: 102690346
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 10298 bases
Position: chrLG13:2114795-2125092
Accession: 102690346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002026	RRM_1	PF00076.22	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002031	RNPS1-201	4124	XM_006637011	ENSLOCP00000002026	282 (aa)	XP_015215434	W5M0W9

Gene Model

Click here to download ENSLOCG00000001758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001758	RNPS1	84	83.333	ENSG00000205937	RNPS1	86	78.621	Homo_sapiens
ENSLOCG00000001758	RNPS1	84	83.264	ENSAMEG00000017861	RNPS1	78	67.782	Ailuropoda_melanoleuca
ENSLOCG00000001758	RNPS1	84	58.333	ENSAPLG00000006231	RNPS1	53	88.696	Anas_platyrhynchos
ENSLOCG00000001758	RNPS1	73	80.861	ENSACAG00000004088	RNPS1	84	63.636	Anolis_carolinensis
ENSLOCG00000001758	RNPS1	84	82.917	ENSANAG00000028802	RNPS1	85	67.500	Aotus_nancymaae
ENSLOCG00000001758	RNPS1	76	82.326	ENSANAG00000029802	-	83	65.581	Aotus_nancymaae
ENSLOCG00000001758	RNPS1	82	68.670	ENSACLG00000021537	-	86	68.670	Astatotilapia_calliptera
ENSLOCG00000001758	RNPS1	76	84.793	ENSBTAG00000009969	RNPS1	77	67.431	Bos_taurus
ENSLOCG00000001758	RNPS1	84	83.333	ENSCJAG00000014969	RNPS1	90	65.421	Callithrix_jacchus
ENSLOCG00000001758	RNPS1	84	83.264	ENSCAFG00000019397	RNPS1	78	67.782	Canis_familiaris
ENSLOCG00000001758	RNPS1	84	83.264	ENSCAFG00020026159	RNPS1	86	65.174	Canis_lupus_dingo
ENSLOCG00000001758	RNPS1	72	83.333	ENSCHIG00000014621	-	69	66.995	Capra_hircus
ENSLOCG00000001758	RNPS1	84	83.333	ENSTSYG00000001629	RNPS1	85	67.500	Carlito_syrichta
ENSLOCG00000001758	RNPS1	76	81.567	ENSTSYG00000031848	-	89	64.977	Carlito_syrichta
ENSLOCG00000001758	RNPS1	84	83.264	ENSCAPG00000007731	RNPS1	78	67.364	Cavia_aperea
ENSLOCG00000001758	RNPS1	84	83.333	ENSCPOG00000002066	RNPS1	85	67.500	Cavia_porcellus
ENSLOCG00000001758	RNPS1	84	82.917	ENSCCAG00000034480	RNPS1	85	67.083	Cebus_capucinus
ENSLOCG00000001758	RNPS1	93	76.894	ENSCATG00000042361	-	80	64.435	Cercocebus_atys
ENSLOCG00000001758	RNPS1	84	83.333	ENSCATG00000013756	RNPS1	89	63.761	Cercocebus_atys
ENSLOCG00000001758	RNPS1	84	83.333	ENSCLAG00000015546	RNPS1	85	67.500	Chinchilla_lanigera
ENSLOCG00000001758	RNPS1	97	81.818	ENSCSAG00000005219	-	81	68.333	Chlorocebus_sabaeus
ENSLOCG00000001758	RNPS1	84	82.008	ENSCHOG00000004866	RNPS1	78	66.667	Choloepus_hoffmanni
ENSLOCG00000001758	RNPS1	84	83.333	ENSCANG00000041307	RNPS1	85	67.500	Colobus_angolensis_palliatus
ENSLOCG00000001758	RNPS1	84	83.333	ENSCGRG00001020431	Rnps1	85	67.500	Cricetulus_griseus_chok1gshd
ENSLOCG00000001758	RNPS1	77	84.862	ENSCGRG00000014021	Rnps1	78	67.431	Cricetulus_griseus_crigri
ENSLOCG00000001758	RNPS1	82	70.386	ENSCSEG00000000402	RNPS1	76	68.240	Cynoglossus_semilaevis
ENSLOCG00000001758	RNPS1	77	66.972	ENSCVAG00000010868	RNPS1	77	66.972	Cyprinodon_variegatus
ENSLOCG00000001758	RNPS1	84	83.264	ENSDNOG00000016081	RNPS1	78	67.782	Dasypus_novemcinctus
ENSLOCG00000001758	RNPS1	69	59.184	ENSDNOG00000038751	-	98	58.376	Dasypus_novemcinctus
ENSLOCG00000001758	RNPS1	84	83.333	ENSDORG00000001755	Rnps1	85	67.500	Dipodomys_ordii
ENSLOCG00000001758	RNPS1	84	83.264	ENSEASG00005004862	RNPS1	78	67.782	Equus_asinus_asinus
ENSLOCG00000001758	RNPS1	79	78.571	ENSECAG00000023288	RNPS1	78	63.761	Equus_caballus
ENSLOCG00000001758	RNPS1	84	83.750	ENSFCAG00000007690	RNPS1	85	67.500	Felis_catus
ENSLOCG00000001758	RNPS1	84	84.937	ENSFALG00000004868	RNPS1	84	69.038	Ficedula_albicollis
ENSLOCG00000001758	RNPS1	84	83.333	ENSFDAG00000003386	RNPS1	85	67.500	Fukomys_damarensis
ENSLOCG00000001758	RNPS1	77	73.973	ENSFHEG00000011705	RNPS1	68	63.819	Fundulus_heteroclitus
ENSLOCG00000001758	RNPS1	84	85.000	ENSGALG00000009288	RNPS1	85	69.167	Gallus_gallus
ENSLOCG00000001758	RNPS1	77	65.138	ENSGAFG00000005457	RNPS1	77	65.138	Gambusia_affinis
ENSLOCG00000001758	RNPS1	84	84.937	ENSGAGG00000010452	RNPS1	78	69.456	Gopherus_agassizii
ENSLOCG00000001758	RNPS1	84	83.333	ENSGGOG00000014275	RNPS1	85	67.500	Gorilla_gorilla
ENSLOCG00000001758	RNPS1	81	76.522	ENSGGOG00000026421	-	79	65.217	Gorilla_gorilla
ENSLOCG00000001758	RNPS1	79	82.143	ENSHGLG00000006292	-	88	69.124	Heterocephalus_glaber_female
ENSLOCG00000001758	RNPS1	84	83.333	ENSHGLG00000013957	RNPS1	85	67.500	Heterocephalus_glaber_female
ENSLOCG00000001758	RNPS1	84	83.333	ENSHGLG00100003539	RNPS1	85	67.500	Heterocephalus_glaber_male
ENSLOCG00000001758	RNPS1	84	83.750	ENSJJAG00000015576	-	85	67.500	Jaculus_jaculus
ENSLOCG00000001758	RNPS1	83	66.524	ENSKMAG00000009135	RNPS1	82	66.524	Kryptolebias_marmoratus
ENSLOCG00000001758	RNPS1	84	83.333	ENSMFAG00000042142	RNPS1	85	67.500	Macaca_fascicularis
ENSLOCG00000001758	RNPS1	86	79.098	ENSMMUG00000041726	-	84	64.435	Macaca_mulatta
ENSLOCG00000001758	RNPS1	71	83.744	ENSMMUG00000019238	-	79	66.995	Macaca_mulatta
ENSLOCG00000001758	RNPS1	86	79.508	ENSMNEG00000024827	-	76	65.438	Macaca_nemestrina
ENSLOCG00000001758	RNPS1	73	78.744	ENSMLEG00000040232	-	86	63.014	Mandrillus_leucophaeus
ENSLOCG00000001758	RNPS1	84	83.333	ENSMLEG00000036928	RNPS1	85	67.500	Mandrillus_leucophaeus
ENSLOCG00000001758	RNPS1	77	86.239	ENSMGAG00000010042	RNPS1	90	70.642	Meleagris_gallopavo
ENSLOCG00000001758	RNPS1	84	83.750	ENSMICG00000031543	RNPS1	85	67.917	Microcebus_murinus
ENSLOCG00000001758	RNPS1	84	83.333	ENSMOCG00000003429	Rnps1	85	67.500	Microtus_ochrogaster
ENSLOCG00000001758	RNPS1	84	83.333	ENSMUSG00000034681	Rnps1	85	67.500	Mus_musculus
ENSLOCG00000001758	RNPS1	84	83.333	MGP_PahariEiJ_G0023498	Rnps1	85	67.500	Mus_pahari
ENSLOCG00000001758	RNPS1	84	83.333	MGP_SPRETEiJ_G0022092	Rnps1	85	67.500	Mus_spretus
ENSLOCG00000001758	RNPS1	84	83.264	ENSMLUG00000016808	RNPS1	78	67.782	Myotis_lucifugus
ENSLOCG00000001758	RNPS1	84	83.333	ENSNGAG00000023702	Rnps1	85	67.500	Nannospalax_galili
ENSLOCG00000001758	RNPS1	88	81.526	ENSNLEG00000009243	RNPS1	88	67.431	Nomascus_leucogenys
ENSLOCG00000001758	RNPS1	84	83.682	ENSMEUG00000008882	RNPS1	78	67.364	Notamacropus_eugenii
ENSLOCG00000001758	RNPS1	84	84.519	ENSOPRG00000016422	RNPS1	78	68.201	Ochotona_princeps
ENSLOCG00000001758	RNPS1	82	69.099	ENSORLG00015011183	RNPS1	72	70.386	Oryzias_latipes_hsok
ENSLOCG00000001758	RNPS1	84	83.264	ENSOARG00000018056	-	67	67.364	Ovis_aries
ENSLOCG00000001758	RNPS1	87	78.947	ENSPPAG00000011845	RNPS1	80	79.535	Pan_paniscus
ENSLOCG00000001758	RNPS1	72	83.333	ENSPPAG00000037836	-	86	65.196	Pan_paniscus
ENSLOCG00000001758	RNPS1	84	83.750	ENSPPRG00000011255	RNPS1	85	67.500	Panthera_pardus
ENSLOCG00000001758	RNPS1	53	75.497	ENSPTIG00000015643	RNPS1	61	86.957	Panthera_tigris_altaica
ENSLOCG00000001758	RNPS1	73	82.609	ENSPTRG00000046326	-	81	66.184	Pan_troglodytes
ENSLOCG00000001758	RNPS1	84	83.333	ENSPTRG00000031310	RNPS1	85	67.500	Pan_troglodytes
ENSLOCG00000001758	RNPS1	73	59.420	ENSPANG00000033576	-	81	45.070	Papio_anubis
ENSLOCG00000001758	RNPS1	84	83.333	ENSPANG00000015748	RNPS1	85	67.500	Papio_anubis
ENSLOCG00000001758	RNPS1	83	85.169	ENSPKIG00000023465	RNPS1	83	62.869	Paramormyrops_kingsleyae
ENSLOCG00000001758	RNPS1	84	85.774	ENSPSIG00000006048	RNPS1	78	69.456	Pelodiscus_sinensis
ENSLOCG00000001758	RNPS1	84	83.333	ENSPEMG00000012797	Rnps1	85	67.500	Peromyscus_maniculatus_bairdii
ENSLOCG00000001758	RNPS1	53	76.821	ENSPCIG00000016114	-	56	85.217	Phascolarctos_cinereus
ENSLOCG00000001758	RNPS1	84	83.750	ENSPCIG00000025012	RNPS1	85	67.500	Phascolarctos_cinereus
ENSLOCG00000001758	RNPS1	77	66.055	ENSPFOG00000009978	RNPS1	77	66.055	Poecilia_formosa
ENSLOCG00000001758	RNPS1	77	66.055	ENSPLAG00000009343	RNPS1	77	66.055	Poecilia_latipinna
ENSLOCG00000001758	RNPS1	77	66.055	ENSPMEG00000008552	RNPS1	77	66.055	Poecilia_mexicana
ENSLOCG00000001758	RNPS1	77	66.055	ENSPREG00000001843	RNPS1	77	66.055	Poecilia_reticulata
ENSLOCG00000001758	RNPS1	84	81.590	ENSPCAG00000004514	RNPS1	78	66.527	Procavia_capensis
ENSLOCG00000001758	RNPS1	84	83.750	ENSPCOG00000005478	RNPS1	85	67.917	Propithecus_coquereli
ENSLOCG00000001758	RNPS1	84	83.264	ENSPVAG00000005105	RNPS1	78	67.782	Pteropus_vampyrus
ENSLOCG00000001758	RNPS1	84	83.264	ENSRNOG00000008703	Rnps1	78	67.364	Rattus_norvegicus
ENSLOCG00000001758	RNPS1	84	83.333	ENSRBIG00000038965	-	88	69.038	Rhinopithecus_bieti
ENSLOCG00000001758	RNPS1	84	83.333	ENSRROG00000041252	RNPS1	85	69.167	Rhinopithecus_roxellana
ENSLOCG00000001758	RNPS1	84	83.333	ENSSBOG00000027927	RNPS1	85	67.500	Saimiri_boliviensis_boliviensis
ENSLOCG00000001758	RNPS1	84	83.682	ENSSHAG00000016951	RNPS1	78	67.364	Sarcophilus_harrisii
ENSLOCG00000001758	RNPS1	82	75.641	ENSSFOG00015022746	RNPS1	84	66.094	Scleropages_formosus
ENSLOCG00000001758	RNPS1	76	83.333	ENSSARG00000001577	RNPS1	78	68.664	Sorex_araneus
ENSLOCG00000001758	RNPS1	84	85.356	ENSSPUG00000016588	RNPS1	78	69.456	Sphenodon_punctatus
ENSLOCG00000001758	RNPS1	84	83.682	ENSSSCG00000008048	RNPS1	78	67.782	Sus_scrofa
ENSLOCG00000001758	RNPS1	84	85.356	ENSTGUG00000003237	RNPS1	84	69.456	Taeniopygia_guttata
ENSLOCG00000001758	RNPS1	87	83.468	ENSTBEG00000009098	RNPS1	88	67.782	Tupaia_belangeri
ENSLOCG00000001758	RNPS1	84	83.264	ENSTTRG00000008220	RNPS1	78	67.782	Tursiops_truncatus
ENSLOCG00000001758	RNPS1	84	83.264	ENSUAMG00000004462	RNPS1	88	69.038	Ursus_americanus
ENSLOCG00000001758	RNPS1	84	83.264	ENSUMAG00000022327	RNPS1	78	67.782	Ursus_maritimus
ENSLOCG00000001758	RNPS1	84	83.264	ENSVVUG00000009244	RNPS1	78	67.782	Vulpes_vulpes
ENSLOCG00000001758	RNPS1	80	72.609	ENSXETG00000024439	rnps1	71	72.146	Xenopus_tropicalis
ENSLOCG00000001758	RNPS1	83	66.094	ENSXMAG00000004827	RNPS1	82	66.094	Xiphophorus_maculatus