EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001781 (Gene tree)
Gene ID: 102692625
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 10901 bases
Position: chrLG10:735371-746271
Accession: 102692625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002079	TRM	PF02005.16	1.8e-68	1	2
ENSLOCP00000002079	TRM	PF02005.16	1.8e-68	2	2
ENSLOCP00000002063	TRM	PF02005.16	2.3e-68	1	2
ENSLOCP00000002063	TRM	PF02005.16	2.3e-68	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002068	-	2122	XM_006634653	ENSLOCP00000002063	705 (aa)	XP_006634716	W5M106
ENSLOCT00000002084	-	2095	-	ENSLOCP00000002079	696 (aa)	-	W5M122

Gene Model

Click here to download ENSLOCG00000001781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001781	trmt1l	90	63.721	ENSG00000121486	TRMT1L	97	75.728	Homo_sapiens
ENSLOCG00000001781	trmt1l	99	72.583	ENSAPOG00000011807	trmt1l	100	72.583	Acanthochromis_polyacanthus
ENSLOCG00000001781	trmt1l	90	63.566	ENSAMEG00000013538	TRMT1L	87	63.566	Ailuropoda_melanoleuca
ENSLOCG00000001781	trmt1l	69	76.082	ENSACIG00000012049	trmt1l	93	76.091	Amphilophus_citrinellus
ENSLOCG00000001781	trmt1l	97	73.894	ENSAOCG00000018112	trmt1l	97	75.281	Amphiprion_ocellaris
ENSLOCG00000001781	trmt1l	97	73.746	ENSAPEG00000021433	trmt1l	97	79.282	Amphiprion_percula
ENSLOCG00000001781	trmt1l	92	79.656	ENSATEG00000004573	trmt1l	98	82.558	Anabas_testudineus
ENSLOCG00000001781	trmt1l	88	67.247	ENSAPLG00000008394	TRMT1L	88	67.247	Anas_platyrhynchos
ENSLOCG00000001781	trmt1l	90	65.620	ENSACAG00000002342	TRMT1L	92	63.244	Anolis_carolinensis
ENSLOCG00000001781	trmt1l	90	64.031	ENSANAG00000038162	TRMT1L	87	63.876	Aotus_nancymaae
ENSLOCG00000001781	trmt1l	99	73.227	ENSACLG00000021625	trmt1l	99	73.227	Astatotilapia_calliptera
ENSLOCG00000001781	trmt1l	100	75.499	ENSAMXG00000009602	trmt1l	100	75.499	Astyanax_mexicanus
ENSLOCG00000001781	trmt1l	91	63.833	ENSBTAG00000011285	TRMT1L	86	64.186	Bos_taurus
ENSLOCG00000001781	trmt1l	90	64.241	ENSCJAG00000005456	TRMT1L	87	64.241	Callithrix_jacchus
ENSLOCG00000001781	trmt1l	91	63.761	ENSCAFG00000013518	TRMT1L	86	63.761	Canis_familiaris
ENSLOCG00000001781	trmt1l	91	63.761	ENSCAFG00020015640	TRMT1L	88	63.761	Canis_lupus_dingo
ENSLOCG00000001781	trmt1l	90	64.341	ENSCHIG00000016522	TRMT1L	86	64.341	Capra_hircus
ENSLOCG00000001781	trmt1l	90	63.411	ENSTSYG00000010465	TRMT1L	88	63.411	Carlito_syrichta
ENSLOCG00000001781	trmt1l	69	66.929	ENSCAPG00000012562	TRMT1L	83	67.063	Cavia_aperea
ENSLOCG00000001781	trmt1l	90	64.087	ENSCPOG00000001567	TRMT1L	88	64.119	Cavia_porcellus
ENSLOCG00000001781	trmt1l	91	63.247	ENSCCAG00000018699	TRMT1L	88	63.093	Cebus_capucinus
ENSLOCG00000001781	trmt1l	91	63.553	ENSCATG00000043114	TRMT1L	88	63.553	Cercocebus_atys
ENSLOCG00000001781	trmt1l	90	51.014	ENSCLAG00000010853	-	85	51.014	Chinchilla_lanigera
ENSLOCG00000001781	trmt1l	90	64.551	ENSCLAG00000010801	-	88	64.551	Chinchilla_lanigera
ENSLOCG00000001781	trmt1l	91	63.553	ENSCSAG00000012880	TRMT1L	88	63.553	Chlorocebus_sabaeus
ENSLOCG00000001781	trmt1l	90	69.014	ENSCPBG00000015694	TRMT1L	89	68.576	Chrysemys_picta_bellii
ENSLOCG00000001781	trmt1l	91	63.553	ENSCANG00000031107	TRMT1L	88	63.553	Colobus_angolensis_palliatus
ENSLOCG00000001781	trmt1l	91	62.500	ENSCGRG00001019297	Trmt1l	88	62.500	Cricetulus_griseus_chok1gshd
ENSLOCG00000001781	trmt1l	91	62.500	ENSCGRG00000005036	Trmt1l	88	62.500	Cricetulus_griseus_crigri
ENSLOCG00000001781	trmt1l	98	73.684	ENSCSEG00000001248	trmt1l	98	73.684	Cynoglossus_semilaevis
ENSLOCG00000001781	trmt1l	97	73.156	ENSCVAG00000012274	trmt1l	98	72.807	Cyprinodon_variegatus
ENSLOCG00000001781	trmt1l	99	76.812	ENSDARG00000042057	trmt1l	99	76.812	Danio_rerio
ENSLOCG00000001781	trmt1l	90	63.256	ENSDNOG00000005239	TRMT1L	87	63.256	Dasypus_novemcinctus
ENSLOCG00000001781	trmt1l	78	64.168	ENSDORG00000003298	Trmt1l	82	64.273	Dipodomys_ordii
ENSLOCG00000001781	trmt1l	78	60.048	ENSETEG00000015895	TRMT1L	66	72.951	Echinops_telfairi
ENSLOCG00000001781	trmt1l	88	47.812	ENSEBUG00000010301	trmt1l	93	48.130	Eptatretus_burgeri
ENSLOCG00000001781	trmt1l	90	62.229	ENSEASG00005005551	TRMT1L	86	62.229	Equus_asinus_asinus
ENSLOCG00000001781	trmt1l	90	64.899	ENSECAG00000020999	TRMT1L	81	64.651	Equus_caballus
ENSLOCG00000001781	trmt1l	91	55.573	ENSEEUG00000014110	TRMT1L	97	53.235	Erinaceus_europaeus
ENSLOCG00000001781	trmt1l	98	76.822	ENSELUG00000020587	trmt1l	98	76.822	Esox_lucius
ENSLOCG00000001781	trmt1l	90	63.721	ENSFCAG00000011285	TRMT1L	87	63.721	Felis_catus
ENSLOCG00000001781	trmt1l	88	66.984	ENSFALG00000003177	TRMT1L	95	66.984	Ficedula_albicollis
ENSLOCG00000001781	trmt1l	91	63.859	ENSFDAG00000008822	TRMT1L	89	63.988	Fukomys_damarensis
ENSLOCG00000001781	trmt1l	76	79.886	ENSFHEG00000014328	trmt1l	98	79.886	Fundulus_heteroclitus
ENSLOCG00000001781	trmt1l	89	75.520	ENSGMOG00000009535	trmt1l	99	76.452	Gadus_morhua
ENSLOCG00000001781	trmt1l	89	66.719	ENSGALG00000033077	TRMT1L	85	64.706	Gallus_gallus
ENSLOCG00000001781	trmt1l	100	72.166	ENSGAFG00000012445	trmt1l	99	72.166	Gambusia_affinis
ENSLOCG00000001781	trmt1l	90	75.425	ENSGACG00000005050	trmt1l	100	75.747	Gasterosteus_aculeatus
ENSLOCG00000001781	trmt1l	90	70.000	ENSGAGG00000007441	TRMT1L	90	65.149	Gopherus_agassizii
ENSLOCG00000001781	trmt1l	90	63.876	ENSGGOG00000011778	TRMT1L	87	63.876	Gorilla_gorilla
ENSLOCG00000001781	trmt1l	99	73.372	ENSHBUG00000000622	trmt1l	99	76.098	Haplochromis_burtoni
ENSLOCG00000001781	trmt1l	90	61.587	ENSHGLG00000003135	-	87	61.600	Heterocephalus_glaber_female
ENSLOCG00000001781	trmt1l	91	52.795	ENSHGLG00000012595	-	92	52.795	Heterocephalus_glaber_female
ENSLOCG00000001781	trmt1l	90	64.087	ENSHGLG00100019412	-	88	64.119	Heterocephalus_glaber_male
ENSLOCG00000001781	trmt1l	91	52.795	ENSHGLG00100004569	-	92	52.795	Heterocephalus_glaber_male
ENSLOCG00000001781	trmt1l	89	76.823	ENSIPUG00000008873	trmt1l	97	76.823	Ictalurus_punctatus
ENSLOCG00000001781	trmt1l	90	63.183	ENSSTOG00000010332	TRMT1L	87	63.551	Ictidomys_tridecemlineatus
ENSLOCG00000001781	trmt1l	93	62.012	ENSJJAG00000010929	Trmt1l	92	62.293	Jaculus_jaculus
ENSLOCG00000001781	trmt1l	90	74.606	ENSKMAG00000010310	trmt1l	93	75.079	Kryptolebias_marmoratus
ENSLOCG00000001781	trmt1l	99	73.837	ENSLBEG00000003487	trmt1l	99	73.837	Labrus_bergylta
ENSLOCG00000001781	trmt1l	91	73.576	ENSLBEG00000007982	-	100	73.576	Labrus_bergylta
ENSLOCG00000001781	trmt1l	94	67.941	ENSLACG00000008447	TRMT1L	98	68.296	Latimeria_chalumnae
ENSLOCG00000001781	trmt1l	90	63.651	ENSLAFG00000004339	TRMT1L	87	63.651	Loxodonta_africana
ENSLOCG00000001781	trmt1l	91	63.400	ENSMFAG00000037592	TRMT1L	88	63.400	Macaca_fascicularis
ENSLOCG00000001781	trmt1l	91	63.400	ENSMMUG00000013879	TRMT1L	92	63.400	Macaca_mulatta
ENSLOCG00000001781	trmt1l	91	63.553	ENSMNEG00000041637	TRMT1L	88	63.553	Macaca_nemestrina
ENSLOCG00000001781	trmt1l	91	63.553	ENSMLEG00000004840	TRMT1L	88	63.553	Mandrillus_leucophaeus
ENSLOCG00000001781	trmt1l	88	79.542	ENSMAMG00000015305	trmt1l	97	80.196	Mastacembelus_armatus
ENSLOCG00000001781	trmt1l	99	73.372	ENSMZEG00005017822	trmt1l	99	73.372	Maylandia_zebra
ENSLOCG00000001781	trmt1l	89	66.719	ENSMGAG00000000930	TRMT1L	95	66.719	Meleagris_gallopavo
ENSLOCG00000001781	trmt1l	91	59.484	ENSMAUG00000019870	Trmt1l	89	59.484	Mesocricetus_auratus
ENSLOCG00000001781	trmt1l	91	63.706	ENSMICG00000009494	TRMT1L	88	63.706	Microcebus_murinus
ENSLOCG00000001781	trmt1l	90	62.462	ENSMOCG00000016453	Trmt1l	87	62.462	Microtus_ochrogaster
ENSLOCG00000001781	trmt1l	88	77.377	ENSMMOG00000016961	trmt1l	97	77.504	Mola_mola
ENSLOCG00000001781	trmt1l	94	66.369	ENSMODG00000007454	TRMT1L	76	66.468	Monodelphis_domestica
ENSLOCG00000001781	trmt1l	98	73.983	ENSMALG00000019306	trmt1l	99	73.983	Monopterus_albus
ENSLOCG00000001781	trmt1l	90	62.733	MGP_CAROLIEiJ_G0014693	Trmt1l	86	63.307	Mus_caroli
ENSLOCG00000001781	trmt1l	89	63.422	ENSMUSG00000053286	Trmt1l	86	63.422	Mus_musculus
ENSLOCG00000001781	trmt1l	90	62.848	MGP_PahariEiJ_G0027929	Trmt1l	87	62.848	Mus_pahari
ENSLOCG00000001781	trmt1l	73	69.892	MGP_SPRETEiJ_G0015500	Trmt1l	81	71.429	Mus_spretus
ENSLOCG00000001781	trmt1l	90	60.742	ENSMPUG00000011859	TRMT1L	87	60.896	Mustela_putorius_furo
ENSLOCG00000001781	trmt1l	91	63.706	ENSMLUG00000001136	TRMT1L	90	63.706	Myotis_lucifugus
ENSLOCG00000001781	trmt1l	90	63.158	ENSNGAG00000011685	Trmt1l	88	63.158	Nannospalax_galili
ENSLOCG00000001781	trmt1l	71	75.506	ENSNBRG00000004053	trmt1l	95	77.352	Neolamprologus_brichardi
ENSLOCG00000001781	trmt1l	90	64.496	ENSNLEG00000018030	TRMT1L	87	64.496	Nomascus_leucogenys
ENSLOCG00000001781	trmt1l	81	60.800	ENSMEUG00000011344	TRMT1L	85	60.800	Notamacropus_eugenii
ENSLOCG00000001781	trmt1l	81	64.425	ENSOPRG00000000680	TRMT1L	85	64.664	Ochotona_princeps
ENSLOCG00000001781	trmt1l	91	60.031	ENSODEG00000000826	TRMT1L	90	59.276	Octodon_degus
ENSLOCG00000001781	trmt1l	99	73.661	ENSONIG00000007823	trmt1l	100	77.583	Oreochromis_niloticus
ENSLOCG00000001781	trmt1l	89	66.929	ENSOANG00000001010	TRMT1L	96	66.929	Ornithorhynchus_anatinus
ENSLOCG00000001781	trmt1l	90	63.807	ENSOCUG00000004896	TRMT1L	93	61.176	Oryctolagus_cuniculus
ENSLOCG00000001781	trmt1l	96	74.554	ENSORLG00000029610	trmt1l	97	80.066	Oryzias_latipes
ENSLOCG00000001781	trmt1l	87	80.231	ENSORLG00020002203	trmt1l	98	74.340	Oryzias_latipes_hni
ENSLOCG00000001781	trmt1l	96	75.000	ENSORLG00015021512	trmt1l	98	74.780	Oryzias_latipes_hsok
ENSLOCG00000001781	trmt1l	83	82.609	ENSOMEG00000016275	trmt1l	87	82.609	Oryzias_melastigma
ENSLOCG00000001781	trmt1l	90	58.880	ENSOGAG00000016186	TRMT1L	97	58.880	Otolemur_garnettii
ENSLOCG00000001781	trmt1l	90	64.341	ENSOARG00000003786	TRMT1L	86	64.341	Ovis_aries
ENSLOCG00000001781	trmt1l	90	63.876	ENSPPAG00000029141	TRMT1L	87	63.876	Pan_paniscus
ENSLOCG00000001781	trmt1l	90	63.721	ENSPPRG00000023981	TRMT1L	87	63.721	Panthera_pardus
ENSLOCG00000001781	trmt1l	90	63.721	ENSPTIG00000021754	TRMT1L	87	63.721	Panthera_tigris_altaica
ENSLOCG00000001781	trmt1l	90	63.876	ENSPTRG00000001776	TRMT1L	87	63.876	Pan_troglodytes
ENSLOCG00000001781	trmt1l	91	61.868	ENSPANG00000020890	TRMT1L	88	61.868	Papio_anubis
ENSLOCG00000001781	trmt1l	100	77.401	ENSPKIG00000005941	trmt1l	100	77.401	Paramormyrops_kingsleyae
ENSLOCG00000001781	trmt1l	88	69.524	ENSPSIG00000010011	TRMT1L	91	69.586	Pelodiscus_sinensis
ENSLOCG00000001781	trmt1l	79	69.355	ENSPMGG00000021359	trmt1l	94	69.534	Periophthalmus_magnuspinnatus
ENSLOCG00000001781	trmt1l	91	62.787	ENSPEMG00000000031	Trmt1l	89	62.787	Peromyscus_maniculatus_bairdii
ENSLOCG00000001781	trmt1l	88	57.771	ENSPMAG00000005838	trmt1l	100	57.903	Petromyzon_marinus
ENSLOCG00000001781	trmt1l	94	65.825	ENSPCIG00000002409	TRMT1L	89	65.825	Phascolarctos_cinereus
ENSLOCG00000001781	trmt1l	99	73.266	ENSPFOG00000003872	trmt1l	99	75.000	Poecilia_formosa
ENSLOCG00000001781	trmt1l	99	73.266	ENSPLAG00000010387	trmt1l	99	74.231	Poecilia_latipinna
ENSLOCG00000001781	trmt1l	99	73.266	ENSPMEG00000011828	trmt1l	99	78.396	Poecilia_mexicana
ENSLOCG00000001781	trmt1l	99	73.266	ENSPREG00000002866	trmt1l	99	73.372	Poecilia_reticulata
ENSLOCG00000001781	trmt1l	90	63.876	ENSPPYG00000000416	TRMT1L	87	63.876	Pongo_abelii
ENSLOCG00000001781	trmt1l	79	67.647	ENSPCAG00000008257	TRMT1L	76	67.647	Procavia_capensis
ENSLOCG00000001781	trmt1l	76	57.222	ENSPCOG00000005682	TRMT1L	84	45.131	Propithecus_coquereli
ENSLOCG00000001781	trmt1l	78	67.467	ENSPVAG00000005961	TRMT1L	76	67.467	Pteropus_vampyrus
ENSLOCG00000001781	trmt1l	98	71.387	ENSPNYG00000005607	trmt1l	99	76.098	Pundamilia_nyererei
ENSLOCG00000001781	trmt1l	100	75.606	ENSPNAG00000004389	trmt1l	100	75.606	Pygocentrus_nattereri
ENSLOCG00000001781	trmt1l	89	63.937	ENSRNOG00000002580	Trmt1l	86	63.937	Rattus_norvegicus
ENSLOCG00000001781	trmt1l	91	63.553	ENSRBIG00000042589	TRMT1L	88	63.553	Rhinopithecus_bieti
ENSLOCG00000001781	trmt1l	91	63.553	ENSRROG00000032183	TRMT1L	88	63.553	Rhinopithecus_roxellana
ENSLOCG00000001781	trmt1l	90	64.496	ENSSBOG00000029282	TRMT1L	87	64.496	Saimiri_boliviensis_boliviensis
ENSLOCG00000001781	trmt1l	99	79.624	ENSSFOG00015004878	trmt1l	99	79.624	Scleropages_formosus
ENSLOCG00000001781	trmt1l	64	78.505	ENSSMAG00000015425	trmt1l	98	78.613	Scophthalmus_maximus
ENSLOCG00000001781	trmt1l	98	77.599	ENSSDUG00000021807	trmt1l	99	83.250	Seriola_dumerili
ENSLOCG00000001781	trmt1l	86	83.250	ENSSLDG00000016579	trmt1l	99	83.250	Seriola_lalandi_dorsalis
ENSLOCG00000001781	trmt1l	66	67.542	ENSSARG00000010135	TRMT1L	83	67.542	Sorex_araneus
ENSLOCG00000001781	trmt1l	86	72.000	ENSSPUG00000003927	TRMT1L	97	71.285	Sphenodon_punctatus
ENSLOCG00000001781	trmt1l	98	74.890	ENSSPAG00000008597	trmt1l	100	74.063	Stegastes_partitus
ENSLOCG00000001781	trmt1l	96	59.483	ENSSSCG00000021393	TRMT1L	89	59.770	Sus_scrofa
ENSLOCG00000001781	trmt1l	88	67.035	ENSTGUG00000003737	TRMT1L	93	67.035	Taeniopygia_guttata
ENSLOCG00000001781	trmt1l	89	73.046	ENSTRUG00000002396	trmt1l	99	67.044	Takifugu_rubripes
ENSLOCG00000001781	trmt1l	61	74.292	ENSTNIG00000005534	trmt1l	99	74.292	Tetraodon_nigroviridis
ENSLOCG00000001781	trmt1l	76	60.440	ENSTBEG00000016498	TRMT1L	75	60.440	Tupaia_belangeri
ENSLOCG00000001781	trmt1l	90	61.860	ENSTTRG00000005892	TRMT1L	87	61.860	Tursiops_truncatus
ENSLOCG00000001781	trmt1l	90	63.566	ENSUAMG00000020936	TRMT1L	87	63.566	Ursus_americanus
ENSLOCG00000001781	trmt1l	90	63.566	ENSUMAG00000021919	TRMT1L	85	63.566	Ursus_maritimus
ENSLOCG00000001781	trmt1l	90	64.431	ENSVPAG00000011854	TRMT1L	96	64.632	Vicugna_pacos
ENSLOCG00000001781	trmt1l	91	63.761	ENSVVUG00000009166	TRMT1L	88	63.761	Vulpes_vulpes
ENSLOCG00000001781	trmt1l	71	59.350	ENSXETG00000004539	trmt1l	95	58.964	Xenopus_tropicalis
ENSLOCG00000001781	trmt1l	85	75.421	ENSXCOG00000007372	trmt1l	90	75.421	Xiphophorus_couchianus
ENSLOCG00000001781	trmt1l	100	72.597	ENSXMAG00000003575	trmt1l	99	75.200	Xiphophorus_maculatus