EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001800 (Gene tree)
Gene ID: 102691114
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 21102 bases
Position: chrLG23:2150038-2171139
Accession: 102691114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002100	DUF1604	PF07713.13	2.7e-37	1	1
ENSLOCP00000002121	DUF1604	PF07713.13	2.7e-37	1	1
ENSLOCP00000002121	G-patch	PF01585.23	2.1e-07	1	1
ENSLOCP00000002100	G-patch	PF01585.23	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002105	-	4026	XM_006641256	ENSLOCP00000002100	935 (aa)	XP_015223826	W5M143
ENSLOCT00000002126	-	2892	-	ENSLOCP00000002121	941 (aa)	-	W5M164

Gene Model

Click here to download ENSLOCG00000001800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001800	gpatch1	90	55.721	ENSG00000076650	GPATCH1	83	72.642	Homo_sapiens
ENSLOCG00000001800	gpatch1	90	54.420	ENSAMEG00000015575	GPATCH1	81	56.939	Ailuropoda_melanoleuca
ENSLOCG00000001800	gpatch1	81	76.243	ENSAOCG00000006668	gpatch1	75	76.243	Amphiprion_ocellaris
ENSLOCG00000001800	gpatch1	81	59.173	ENSAPEG00000000026	gpatch1	80	59.459	Amphiprion_percula
ENSLOCG00000001800	gpatch1	91	52.974	ENSATEG00000014494	gpatch1	99	54.239	Anabas_testudineus
ENSLOCG00000001800	gpatch1	90	51.448	ENSAPLG00000007584	GPATCH1	85	54.047	Anas_platyrhynchos
ENSLOCG00000001800	gpatch1	90	54.754	ENSANAG00000027002	GPATCH1	82	57.419	Aotus_nancymaae
ENSLOCG00000001800	gpatch1	81	58.312	ENSACLG00000024740	gpatch1	79	58.543	Astatotilapia_calliptera
ENSLOCG00000001800	gpatch1	92	56.897	ENSAMXG00000020177	gpatch1	86	60.123	Astyanax_mexicanus
ENSLOCG00000001800	gpatch1	90	54.713	ENSBTAG00000000721	GPATCH1	82	57.532	Bos_taurus
ENSLOCG00000001800	gpatch1	67	30.382	WBGene00011109	R07E5.1	68	30.653	Caenorhabditis_elegans
ENSLOCG00000001800	gpatch1	90	55.326	ENSCJAG00000000684	GPATCH1	82	58.031	Callithrix_jacchus
ENSLOCG00000001800	gpatch1	90	55.930	ENSCAFG00000007457	GPATCH1	68	58.612	Canis_familiaris
ENSLOCG00000001800	gpatch1	90	55.930	ENSCAFG00020019731	GPATCH1	82	58.612	Canis_lupus_dingo
ENSLOCG00000001800	gpatch1	90	53.555	ENSCHIG00000019626	GPATCH1	83	57.778	Capra_hircus
ENSLOCG00000001800	gpatch1	78	55.751	ENSCAPG00000008827	GPATCH1	81	55.570	Cavia_aperea
ENSLOCG00000001800	gpatch1	81	57.069	ENSCPOG00000024477	GPATCH1	81	57.198	Cavia_porcellus
ENSLOCG00000001800	gpatch1	90	54.410	ENSCCAG00000024676	GPATCH1	82	57.419	Cebus_capucinus
ENSLOCG00000001800	gpatch1	90	54.082	ENSCATG00000043637	GPATCH1	83	71.698	Cercocebus_atys
ENSLOCG00000001800	gpatch1	89	54.376	ENSCLAG00000003395	-	82	57.543	Chinchilla_lanigera
ENSLOCG00000001800	gpatch1	90	53.592	ENSCSAG00000004743	GPATCH1	82	55.856	Chlorocebus_sabaeus
ENSLOCG00000001800	gpatch1	82	50.446	ENSCHOG00000012865	GPATCH1	80	51.627	Choloepus_hoffmanni
ENSLOCG00000001800	gpatch1	78	57.687	ENSCPBG00000000666	GPATCH1	92	57.551	Chrysemys_picta_bellii
ENSLOCG00000001800	gpatch1	90	33.566	ENSCING00000012518	-	84	34.460	Ciona_intestinalis
ENSLOCG00000001800	gpatch1	81	56.148	ENSCANG00000012540	GPATCH1	99	56.148	Colobus_angolensis_palliatus
ENSLOCG00000001800	gpatch1	87	54.306	ENSCGRG00001016736	Gpatch1	80	56.551	Cricetulus_griseus_chok1gshd
ENSLOCG00000001800	gpatch1	78	48.178	ENSCGRG00000005069	Gpatch1	77	47.989	Cricetulus_griseus_crigri
ENSLOCG00000001800	gpatch1	90	42.756	ENSCSEG00000019456	-	76	70.408	Cynoglossus_semilaevis
ENSLOCG00000001800	gpatch1	89	58.158	ENSDARG00000033418	gpatch1	99	56.024	Danio_rerio
ENSLOCG00000001800	gpatch1	89	55.363	ENSDNOG00000005291	GPATCH1	85	58.215	Dasypus_novemcinctus
ENSLOCG00000001800	gpatch1	90	52.028	ENSDORG00000012546	Gpatch1	84	54.107	Dipodomys_ordii
ENSLOCG00000001800	gpatch1	82	30.451	FBgn0036386	CG8833	67	33.141	Drosophila_melanogaster
ENSLOCG00000001800	gpatch1	90	50.580	ENSETEG00000003626	GPATCH1	71	58.636	Echinops_telfairi
ENSLOCG00000001800	gpatch1	95	36.218	ENSEBUG00000011286	gpatch1	83	38.868	Eptatretus_burgeri
ENSLOCG00000001800	gpatch1	90	55.097	ENSEASG00005021162	GPATCH1	88	57.888	Equus_asinus_asinus
ENSLOCG00000001800	gpatch1	90	55.981	ENSECAG00000022743	GPATCH1	79	57.956	Equus_caballus
ENSLOCG00000001800	gpatch1	72	61.275	ENSEEUG00000012925	GPATCH1	73	61.275	Erinaceus_europaeus
ENSLOCG00000001800	gpatch1	99	55.036	ENSELUG00000018195	gpatch1	99	57.114	Esox_lucius
ENSLOCG00000001800	gpatch1	90	52.809	ENSFCAG00000014917	GPATCH1	81	56.885	Felis_catus
ENSLOCG00000001800	gpatch1	92	51.934	ENSFALG00000007821	GPATCH1	99	51.806	Ficedula_albicollis
ENSLOCG00000001800	gpatch1	78	57.259	ENSFDAG00000003871	GPATCH1	82	56.988	Fukomys_damarensis
ENSLOCG00000001800	gpatch1	81	50.792	ENSGMOG00000003830	gpatch1	88	51.055	Gadus_morhua
ENSLOCG00000001800	gpatch1	92	53.716	ENSGALG00000004839	GPATCH1	84	56.307	Gallus_gallus
ENSLOCG00000001800	gpatch1	89	54.186	ENSGACG00000017544	gpatch1	84	57.345	Gasterosteus_aculeatus
ENSLOCG00000001800	gpatch1	89	55.490	ENSGAGG00000010067	GPATCH1	99	51.525	Gopherus_agassizii
ENSLOCG00000001800	gpatch1	87	55.450	ENSGGOG00000010862	GPATCH1	81	58.199	Gorilla_gorilla
ENSLOCG00000001800	gpatch1	91	55.765	ENSHBUG00000023462	gpatch1	99	54.268	Haplochromis_burtoni
ENSLOCG00000001800	gpatch1	83	56.781	ENSHGLG00000009334	GPATCH1	81	56.809	Heterocephalus_glaber_female
ENSLOCG00000001800	gpatch1	83	56.654	ENSHGLG00100018074	GPATCH1	81	56.680	Heterocephalus_glaber_male
ENSLOCG00000001800	gpatch1	99	55.521	ENSIPUG00000014977	gpatch1	99	57.157	Ictalurus_punctatus
ENSLOCG00000001800	gpatch1	90	53.731	ENSSTOG00000003720	GPATCH1	81	56.420	Ictidomys_tridecemlineatus
ENSLOCG00000001800	gpatch1	90	56.177	ENSJJAG00000023765	Gpatch1	99	53.537	Jaculus_jaculus
ENSLOCG00000001800	gpatch1	81	57.034	ENSKMAG00000017950	gpatch1	82	57.687	Kryptolebias_marmoratus
ENSLOCG00000001800	gpatch1	92	53.937	ENSLBEG00000026527	gpatch1	79	58.012	Labrus_bergylta
ENSLOCG00000001800	gpatch1	88	55.344	ENSLACG00000008130	GPATCH1	80	59.299	Latimeria_chalumnae
ENSLOCG00000001800	gpatch1	90	55.086	ENSLAFG00000013589	GPATCH1	87	57.513	Loxodonta_africana
ENSLOCG00000001800	gpatch1	90	55.287	ENSMFAG00000034418	GPATCH1	83	71.698	Macaca_fascicularis
ENSLOCG00000001800	gpatch1	90	55.441	ENSMMUG00000011790	GPATCH1	83	72.642	Macaca_mulatta
ENSLOCG00000001800	gpatch1	90	55.046	ENSMNEG00000045084	GPATCH1	83	70.755	Macaca_nemestrina
ENSLOCG00000001800	gpatch1	90	45.805	ENSMLEG00000043840	GPATCH1	79	48.964	Mandrillus_leucophaeus
ENSLOCG00000001800	gpatch1	81	58.312	ENSMZEG00005001926	gpatch1	80	58.543	Maylandia_zebra
ENSLOCG00000001800	gpatch1	90	53.721	ENSMGAG00000005775	GPATCH1	99	53.255	Meleagris_gallopavo
ENSLOCG00000001800	gpatch1	90	50.810	ENSMICG00000004829	GPATCH1	83	52.326	Microcebus_murinus
ENSLOCG00000001800	gpatch1	90	54.861	ENSMOCG00000000174	Gpatch1	82	57.272	Microtus_ochrogaster
ENSLOCG00000001800	gpatch1	82	54.827	ENSMMOG00000002140	gpatch1	87	55.260	Mola_mola
ENSLOCG00000001800	gpatch1	90	54.461	ENSMODG00000012226	GPATCH1	81	57.106	Monodelphis_domestica
ENSLOCG00000001800	gpatch1	99	53.272	ENSMALG00000014386	gpatch1	82	57.412	Monopterus_albus
ENSLOCG00000001800	gpatch1	92	54.515	ENSMUSG00000063808	Gpatch1	100	73.469	Mus_musculus
ENSLOCG00000001800	gpatch1	92	54.362	MGP_PahariEiJ_G0012816	Gpatch1	100	74.490	Mus_pahari
ENSLOCG00000001800	gpatch1	92	53.634	MGP_SPRETEiJ_G0030681	Gpatch1	100	74.490	Mus_spretus
ENSLOCG00000001800	gpatch1	90	54.076	ENSMPUG00000007658	GPATCH1	81	56.995	Mustela_putorius_furo
ENSLOCG00000001800	gpatch1	90	54.879	ENSMLUG00000012161	GPATCH1	99	52.151	Myotis_lucifugus
ENSLOCG00000001800	gpatch1	90	53.494	ENSNGAG00000012455	Gpatch1	82	56.883	Nannospalax_galili
ENSLOCG00000001800	gpatch1	90	53.741	ENSNLEG00000007659	GPATCH1	83	72.642	Nomascus_leucogenys
ENSLOCG00000001800	gpatch1	76	51.950	ENSMEUG00000015174	GPATCH1	76	51.944	Notamacropus_eugenii
ENSLOCG00000001800	gpatch1	90	53.001	ENSODEG00000007103	GPATCH1	81	57.032	Octodon_degus
ENSLOCG00000001800	gpatch1	81	57.881	ENSONIG00000003302	gpatch1	99	54.010	Oreochromis_niloticus
ENSLOCG00000001800	gpatch1	90	54.842	ENSOANG00000012732	GPATCH1	82	57.552	Ornithorhynchus_anatinus
ENSLOCG00000001800	gpatch1	90	56.395	ENSOCUG00000015905	GPATCH1	99	55.638	Oryctolagus_cuniculus
ENSLOCG00000001800	gpatch1	91	55.923	ENSORLG00000018706	gpatch1	97	52.210	Oryzias_latipes
ENSLOCG00000001800	gpatch1	90	54.920	ENSOMEG00000022688	gpatch1	82	58.503	Oryzias_melastigma
ENSLOCG00000001800	gpatch1	83	57.769	ENSOGAG00000004016	GPATCH1	96	57.677	Otolemur_garnettii
ENSLOCG00000001800	gpatch1	89	53.096	ENSOARG00000004365	GPATCH1	81	57.274	Ovis_aries
ENSLOCG00000001800	gpatch1	90	55.378	ENSPPAG00000020990	GPATCH1	83	73.148	Pan_paniscus
ENSLOCG00000001800	gpatch1	90	52.697	ENSPPRG00000017245	GPATCH1	81	56.885	Panthera_pardus
ENSLOCG00000001800	gpatch1	90	53.628	ENSPTIG00000019649	GPATCH1	81	57.658	Panthera_tigris_altaica
ENSLOCG00000001800	gpatch1	90	55.378	ENSPTRG00000010803	GPATCH1	83	72.642	Pan_troglodytes
ENSLOCG00000001800	gpatch1	90	55.161	ENSPANG00000012374	GPATCH1	83	71.698	Papio_anubis
ENSLOCG00000001800	gpatch1	80	64.083	ENSPKIG00000020745	gpatch1	77	63.907	Paramormyrops_kingsleyae
ENSLOCG00000001800	gpatch1	89	55.948	ENSPSIG00000013433	GPATCH1	81	57.717	Pelodiscus_sinensis
ENSLOCG00000001800	gpatch1	90	55.034	ENSPEMG00000000636	Gpatch1	82	57.603	Peromyscus_maniculatus_bairdii
ENSLOCG00000001800	gpatch1	90	54.895	ENSPCIG00000021003	GPATCH1	85	57.662	Phascolarctos_cinereus
ENSLOCG00000001800	gpatch1	72	51.814	ENSPREG00000008264	gpatch1	88	49.589	Poecilia_reticulata
ENSLOCG00000001800	gpatch1	90	52.332	ENSPPYG00000009824	GPATCH1	81	56.031	Pongo_abelii
ENSLOCG00000001800	gpatch1	81	54.261	ENSPCAG00000005931	GPATCH1	74	54.144	Procavia_capensis
ENSLOCG00000001800	gpatch1	94	52.291	ENSPCOG00000009674	GPATCH1	87	55.311	Propithecus_coquereli
ENSLOCG00000001800	gpatch1	76	57.521	ENSPVAG00000017767	GPATCH1	77	57.517	Pteropus_vampyrus
ENSLOCG00000001800	gpatch1	81	58.756	ENSPNYG00000018189	gpatch1	89	59.415	Pundamilia_nyererei
ENSLOCG00000001800	gpatch1	99	57.773	ENSPNAG00000013187	gpatch1	99	57.100	Pygocentrus_nattereri
ENSLOCG00000001800	gpatch1	92	54.821	ENSRNOG00000011584	Gpatch1	82	58.269	Rattus_norvegicus
ENSLOCG00000001800	gpatch1	90	50.057	ENSRBIG00000034723	GPATCH1	82	52.005	Rhinopithecus_bieti
ENSLOCG00000001800	gpatch1	90	55.097	ENSRROG00000024428	GPATCH1	83	70.755	Rhinopithecus_roxellana
ENSLOCG00000001800	gpatch1	90	54.577	ENSSBOG00000034650	GPATCH1	82	57.216	Saimiri_boliviensis_boliviensis
ENSLOCG00000001800	gpatch1	90	55.000	ENSSHAG00000016016	GPATCH1	81	57.847	Sarcophilus_harrisii
ENSLOCG00000001800	gpatch1	90	61.364	ENSSFOG00015011535	gpatch1	99	60.104	Scleropages_formosus
ENSLOCG00000001800	gpatch1	99	49.310	ENSSMAG00000002883	gpatch1	90	52.422	Scophthalmus_maximus
ENSLOCG00000001800	gpatch1	81	58.157	ENSSDUG00000007444	gpatch1	99	54.363	Seriola_dumerili
ENSLOCG00000001800	gpatch1	81	58.189	ENSSLDG00000002856	gpatch1	89	58.809	Seriola_lalandi_dorsalis
ENSLOCG00000001800	gpatch1	71	61.652	ENSSARG00000004108	GPATCH1	72	61.652	Sorex_araneus
ENSLOCG00000001800	gpatch1	90	56.207	ENSSSCG00000002865	GPATCH1	84	58.312	Sus_scrofa
ENSLOCG00000001800	gpatch1	92	52.140	ENSTGUG00000009401	GPATCH1	82	56.584	Taeniopygia_guttata
ENSLOCG00000001800	gpatch1	81	56.364	ENSTRUG00000005785	-	81	56.714	Takifugu_rubripes
ENSLOCG00000001800	gpatch1	81	56.364	ENSTRUG00000025081	gpatch1	81	56.714	Takifugu_rubripes
ENSLOCG00000001800	gpatch1	81	56.291	ENSTNIG00000002554	gpatch1	97	56.848	Tetraodon_nigroviridis
ENSLOCG00000001800	gpatch1	64	55.114	ENSTBEG00000007750	-	80	55.114	Tupaia_belangeri
ENSLOCG00000001800	gpatch1	90	49.943	ENSTTRG00000012221	GPATCH1	81	51.554	Tursiops_truncatus
ENSLOCG00000001800	gpatch1	90	54.483	ENSUMAG00000014645	GPATCH1	79	74.490	Ursus_maritimus
ENSLOCG00000001800	gpatch1	78	72.000	ENSVPAG00000010313	GPATCH1	75	71.038	Vicugna_pacos
ENSLOCG00000001800	gpatch1	90	55.086	ENSVVUG00000016572	GPATCH1	82	57.902	Vulpes_vulpes
ENSLOCG00000001800	gpatch1	99	47.500	ENSXETG00000018276	gpatch1	84	52.932	Xenopus_tropicalis