EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000001861 (Gene tree)
Gene ID: 102686122
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat domain 31
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 29194 bases
Position: chrLG4:3136332-3165525
Accession: 102686122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002173	RRM_1	PF00076.22	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002166	-	4208	-	ENSLOCP00000002161	604 (aa)	-	W5M1A4
ENSLOCT00000002178	-	4169	XM_006629133	ENSLOCP00000002173	648 (aa)	-	W5M1B6

Gene Model

Click here to download ENSLOCG00000001861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000001861	-	64	35.529	ENSLOCG00000008967	zgc:123010	88	33.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001861	-	69	32.135	ENSAPOG00000001034	-	80	32.494	Acanthochromis_polyacanthus
ENSLOCG00000001861	-	81	37.545	ENSAPOG00000005058	si:dkey-33c12.4	81	37.726	Acanthochromis_polyacanthus
ENSLOCG00000001861	-	64	45.233	ENSAPOG00000022403	-	69	44.737	Acanthochromis_polyacanthus
ENSLOCG00000001861	-	63	35.646	ENSAPOG00000019633	zgc:123010	89	33.019	Acanthochromis_polyacanthus
ENSLOCG00000001861	-	63	35.208	ENSACIG00000021684	zgc:123010	87	34.474	Amphilophus_citrinellus
ENSLOCG00000001861	-	69	34.292	ENSAOCG00000005910	zgc:123010	89	32.519	Amphiprion_ocellaris
ENSLOCG00000001861	-	64	45.638	ENSAOCG00000000431	-	81	43.462	Amphiprion_ocellaris
ENSLOCG00000001861	-	59	42.317	ENSAOCG00000020066	si:dkey-33c12.4	80	38.669	Amphiprion_ocellaris
ENSLOCG00000001861	-	58	47.942	ENSAPEG00000023603	-	81	43.327	Amphiprion_percula
ENSLOCG00000001861	-	63	35.885	ENSAPEG00000014305	zgc:123010	94	33.083	Amphiprion_percula
ENSLOCG00000001861	-	70	37.945	ENSATEG00000018885	si:dkey-33c12.4	86	36.014	Anabas_testudineus
ENSLOCG00000001861	-	63	33.412	ENSATEG00000022160	-	91	31.520	Anabas_testudineus
ENSLOCG00000001861	-	57	47.619	ENSATEG00000018302	-	78	44.135	Anabas_testudineus
ENSLOCG00000001861	-	63	35.817	ENSATEG00000001220	zgc:123010	89	32.203	Anabas_testudineus
ENSLOCG00000001861	-	54	42.328	ENSACLG00000014192	si:dkey-33c12.4	88	37.018	Astatotilapia_calliptera
ENSLOCG00000001861	-	75	45.889	ENSACLG00000003019	-	84	44.742	Astatotilapia_calliptera
ENSLOCG00000001861	-	64	36.557	ENSACLG00000010188	zgc:123010	71	35.849	Astatotilapia_calliptera
ENSLOCG00000001861	-	75	30.739	ENSACLG00000012346	-	89	30.798	Astatotilapia_calliptera
ENSLOCG00000001861	-	68	35.666	ENSAMXG00000041967	zgc:123010	66	36.804	Astyanax_mexicanus
ENSLOCG00000001861	-	85	46.099	ENSAMXG00000010871	si:dkey-33c12.4	86	45.550	Astyanax_mexicanus
ENSLOCG00000001861	-	87	38.047	ENSCPBG00000024454	-	81	38.542	Chrysemys_picta_bellii
ENSLOCG00000001861	-	51	34.036	ENSCSEG00000006468	zgc:123010	59	30.913	Cynoglossus_semilaevis
ENSLOCG00000001861	-	74	42.533	ENSCSEG00000002755	-	83	43.033	Cynoglossus_semilaevis
ENSLOCG00000001861	-	71	32.189	ENSCVAG00000013288	zgc:123010	76	32.906	Cyprinodon_variegatus
ENSLOCG00000001861	-	71	43.117	ENSCVAG00000004187	-	75	45.833	Cyprinodon_variegatus
ENSLOCG00000001861	-	57	42.746	ENSCVAG00000006564	-	58	42.746	Cyprinodon_variegatus
ENSLOCG00000001861	-	85	47.887	ENSDARG00000057890	si:dkey-33c12.4	85	48.168	Danio_rerio
ENSLOCG00000001861	-	64	33.095	ENSDARG00000039082	zgc:123010	61	35.072	Danio_rerio
ENSLOCG00000001861	-	86	42.734	ENSELUG00000001633	-	89	41.766	Esox_lucius
ENSLOCG00000001861	-	63	35.577	ENSELUG00000022008	zgc:123010	78	42.400	Esox_lucius
ENSLOCG00000001861	-	65	33.800	ENSELUG00000021447	-	90	32.000	Esox_lucius
ENSLOCG00000001861	-	85	44.387	ENSELUG00000002009	si:dkey-33c12.4	98	43.781	Esox_lucius
ENSLOCG00000001861	-	53	48.649	ENSFHEG00000009983	-	62	49.176	Fundulus_heteroclitus
ENSLOCG00000001861	-	57	42.487	ENSFHEG00000005521	si:dkey-33c12.4	58	42.487	Fundulus_heteroclitus
ENSLOCG00000001861	-	63	35.885	ENSFHEG00000002306	zgc:123010	68	35.392	Fundulus_heteroclitus
ENSLOCG00000001861	-	63	35.154	ENSGMOG00000018473	zgc:123010	94	34.856	Gadus_morhua
ENSLOCG00000001861	-	81	33.032	ENSGALG00000036747	TTC31	83	35.124	Gallus_gallus
ENSLOCG00000001861	-	57	46.301	ENSGAFG00000016594	-	70	44.060	Gambusia_affinis
ENSLOCG00000001861	-	79	31.667	ENSGAFG00000009373	zgc:123010	87	36.842	Gambusia_affinis
ENSLOCG00000001861	-	57	40.722	ENSGAFG00000017596	si:dkey-33c12.4	84	36.250	Gambusia_affinis
ENSLOCG00000001861	-	63	35.646	ENSGACG00000007620	zgc:123010	94	34.689	Gasterosteus_aculeatus
ENSLOCG00000001861	-	54	43.516	ENSGACG00000004936	-	92	42.651	Gasterosteus_aculeatus
ENSLOCG00000001861	-	75	30.739	ENSHBUG00000016720	-	89	30.989	Haplochromis_burtoni
ENSLOCG00000001861	-	54	42.175	ENSHBUG00000010735	si:dkey-33c12.4	84	37.351	Haplochromis_burtoni
ENSLOCG00000001861	-	85	47.007	ENSIPUG00000005998	si:dkey-33c12.4	88	47.038	Ictalurus_punctatus
ENSLOCG00000001861	-	60	45.823	ENSKMAG00000006468	-	68	45.176	Kryptolebias_marmoratus
ENSLOCG00000001861	-	92	35.591	ENSKMAG00000016610	si:dkey-33c12.4	86	38.305	Kryptolebias_marmoratus
ENSLOCG00000001861	-	63	35.885	ENSKMAG00000021350	zgc:123010	68	35.407	Kryptolebias_marmoratus
ENSLOCG00000001861	-	64	44.371	ENSLBEG00000028046	-	69	44.124	Labrus_bergylta
ENSLOCG00000001861	-	66	34.404	ENSLBEG00000013518	-	91	33.459	Labrus_bergylta
ENSLOCG00000001861	-	90	32.686	ENSLBEG00000021088	-	83	36.222	Labrus_bergylta
ENSLOCG00000001861	-	63	35.646	ENSLBEG00000023984	zgc:123010	89	31.509	Labrus_bergylta
ENSLOCG00000001861	-	63	35.381	ENSLACG00000009001	zgc:123010	71	41.538	Latimeria_chalumnae
ENSLOCG00000001861	-	87	41.493	ENSLACG00000004602	-	95	40.768	Latimeria_chalumnae
ENSLOCG00000001861	-	72	42.972	ENSMAMG00000004311	-	69	47.156	Mastacembelus_armatus
ENSLOCG00000001861	-	63	34.140	ENSMAMG00000002460	-	76	35.955	Mastacembelus_armatus
ENSLOCG00000001861	-	63	33.898	ENSMAMG00000002377	-	72	35.674	Mastacembelus_armatus
ENSLOCG00000001861	-	67	37.821	ENSMAMG00000000111	si:dkey-33c12.4	84	36.395	Mastacembelus_armatus
ENSLOCG00000001861	-	63	34.300	ENSMAMG00000001145	zgc:123010	83	34.300	Mastacembelus_armatus
ENSLOCG00000001861	-	58	48.921	ENSMZEG00005000585	-	84	44.722	Maylandia_zebra
ENSLOCG00000001861	-	54	42.063	ENSMZEG00005014276	si:dkey-33c12.4	84	37.288	Maylandia_zebra
ENSLOCG00000001861	-	64	36.557	ENSMZEG00005027733	zgc:123010	71	35.849	Maylandia_zebra
ENSLOCG00000001861	-	63	32.471	ENSMZEG00005014740	-	89	31.915	Maylandia_zebra
ENSLOCG00000001861	-	63	31.325	ENSMMOG00000017955	-	70	34.251	Mola_mola
ENSLOCG00000001861	-	51	36.283	ENSMMOG00000010544	zgc:123010	64	35.693	Mola_mola
ENSLOCG00000001861	-	54	41.240	ENSMALG00000002265	si:dkey-33c12.4	85	36.749	Monopterus_albus
ENSLOCG00000001861	-	63	45.067	ENSMALG00000003167	-	69	43.696	Monopterus_albus
ENSLOCG00000001861	-	63	35.337	ENSMALG00000017698	zgc:123010	68	35.096	Monopterus_albus
ENSLOCG00000001861	-	58	44.118	ENSNBRG00000021157	zgc:123010	62	47.500	Neolamprologus_brichardi
ENSLOCG00000001861	-	53	42.229	ENSONIG00000012263	-	96	41.011	Oreochromis_niloticus
ENSLOCG00000001861	-	58	49.282	ENSONIG00000007538	-	93	53.103	Oreochromis_niloticus
ENSLOCG00000001861	-	64	34.434	ENSONIG00000018353	zgc:123010	95	32.528	Oreochromis_niloticus
ENSLOCG00000001861	-	50	34.132	ENSONIG00000000297	-	95	34.132	Oreochromis_niloticus
ENSLOCG00000001861	-	72	35.805	ENSORLG00000029651	si:dkey-33c12.4	87	35.159	Oryzias_latipes
ENSLOCG00000001861	-	87	41.000	ENSORLG00000030385	-	74	44.612	Oryzias_latipes
ENSLOCG00000001861	-	62	34.063	ENSORLG00000007675	zgc:123010	85	32.415	Oryzias_latipes
ENSLOCG00000001861	-	64	38.995	ENSORLG00020008750	si:dkey-33c12.4	79	34.392	Oryzias_latipes_hni
ENSLOCG00000001861	-	62	34.307	ENSORLG00020003457	zgc:123010	85	32.842	Oryzias_latipes_hni
ENSLOCG00000001861	-	63	35.422	ENSORLG00015008373	zgc:123010	89	32.567	Oryzias_latipes_hsok
ENSLOCG00000001861	-	87	40.667	ENSORLG00015008400	-	74	43.312	Oryzias_latipes_hsok
ENSLOCG00000001861	-	85	41.980	ENSOMEG00000009428	-	78	44.668	Oryzias_melastigma
ENSLOCG00000001861	-	79	33.524	ENSOMEG00000003408	zgc:123010	89	32.576	Oryzias_melastigma
ENSLOCG00000001861	-	54	44.225	ENSOMEG00000008913	-	52	44.110	Oryzias_melastigma
ENSLOCG00000001861	-	92	46.166	ENSPKIG00000011819	-	84	47.434	Paramormyrops_kingsleyae
ENSLOCG00000001861	-	66	33.716	ENSPKIG00000015521	zgc:123010	66	34.593	Paramormyrops_kingsleyae
ENSLOCG00000001861	-	51	36.585	ENSPMGG00000020251	zgc:123010	73	38.596	Periophthalmus_magnuspinnatus
ENSLOCG00000001861	-	50	33.133	ENSPMAG00000004544	zgc:123010	88	42.727	Petromyzon_marinus
ENSLOCG00000001861	-	64	46.118	ENSPFOG00000017092	-	93	45.676	Poecilia_formosa
ENSLOCG00000001861	-	81	37.057	ENSPFOG00000009143	si:dkey-33c12.4	84	36.702	Poecilia_formosa
ENSLOCG00000001861	-	71	33.262	ENSPFOG00000001073	zgc:123010	89	32.264	Poecilia_formosa
ENSLOCG00000001861	-	81	36.814	ENSPLAG00000022537	si:dkey-33c12.4	87	37.057	Poecilia_latipinna
ENSLOCG00000001861	-	71	33.262	ENSPLAG00000007711	zgc:123010	89	32.264	Poecilia_latipinna
ENSLOCG00000001861	-	81	37.057	ENSPMEG00000015590	si:dkey-33c12.4	84	36.702	Poecilia_mexicana
ENSLOCG00000001861	-	71	32.833	ENSPMEG00000005092	zgc:123010	89	32.264	Poecilia_mexicana
ENSLOCG00000001861	-	57	49.029	ENSPMEG00000009905	-	70	46.804	Poecilia_mexicana
ENSLOCG00000001861	-	53	40.000	ENSPREG00000019587	zgc:123010	83	40.000	Poecilia_reticulata
ENSLOCG00000001861	-	58	47.826	ENSPREG00000016861	-	73	45.111	Poecilia_reticulata
ENSLOCG00000001861	-	54	42.063	ENSPNYG00000018262	si:dkey-33c12.4	84	37.288	Pundamilia_nyererei
ENSLOCG00000001861	-	51	36.152	ENSPNYG00000023304	-	74	36.152	Pundamilia_nyererei
ENSLOCG00000001861	-	58	48.921	ENSPNYG00000001047	-	84	44.722	Pundamilia_nyererei
ENSLOCG00000001861	-	64	35.529	ENSPNYG00000007893	zgc:123010	71	35.681	Pundamilia_nyererei
ENSLOCG00000001861	-	65	36.471	ENSPNAG00000007579	zgc:123010	89	33.205	Pygocentrus_nattereri
ENSLOCG00000001861	-	90	46.050	ENSPNAG00000018386	si:dkey-33c12.4	86	46.034	Pygocentrus_nattereri
ENSLOCG00000001861	-	95	46.508	ENSSFOG00015005186	-	98	47.460	Scleropages_formosus
ENSLOCG00000001861	-	87	43.696	ENSSFOG00015009199	-	86	42.707	Scleropages_formosus
ENSLOCG00000001861	-	64	34.442	ENSSFOG00015021394	zgc:123010	94	33.143	Scleropages_formosus
ENSLOCG00000001861	-	74	32.649	ENSSMAG00000002904	zgc:123010	95	31.844	Scophthalmus_maximus
ENSLOCG00000001861	-	69	43.611	ENSSMAG00000010960	-	80	42.939	Scophthalmus_maximus
ENSLOCG00000001861	-	81	37.308	ENSSMAG00000008147	si:dkey-33c12.4	84	37.031	Scophthalmus_maximus
ENSLOCG00000001861	-	71	34.335	ENSSDUG00000008651	zgc:123010	89	32.957	Seriola_dumerili
ENSLOCG00000001861	-	68	46.526	ENSSDUG00000010976	-	71	44.731	Seriola_dumerili
ENSLOCG00000001861	-	65	32.947	ENSSDUG00000014026	-	89	31.298	Seriola_dumerili
ENSLOCG00000001861	-	91	38.179	ENSSDUG00000003213	si:dkey-33c12.4	89	39.356	Seriola_dumerili
ENSLOCG00000001861	-	79	33.525	ENSSLDG00000019386	zgc:123010	89	32.963	Seriola_lalandi_dorsalis
ENSLOCG00000001861	-	68	45.895	ENSSLDG00000012846	-	74	44.516	Seriola_lalandi_dorsalis
ENSLOCG00000001861	-	91	38.179	ENSSLDG00000009448	si:dkey-33c12.4	83	38.393	Seriola_lalandi_dorsalis
ENSLOCG00000001861	-	53	45.429	ENSSPAG00000022577	-	81	38.657	Stegastes_partitus
ENSLOCG00000001861	-	64	46.205	ENSSPAG00000004843	-	69	44.880	Stegastes_partitus
ENSLOCG00000001861	-	63	35.407	ENSSPAG00000013621	zgc:123010	89	32.653	Stegastes_partitus
ENSLOCG00000001861	-	59	43.979	ENSTRUG00000000057	-	74	39.735	Takifugu_rubripes
ENSLOCG00000001861	-	65	34.353	ENSTRUG00000024824	zgc:123010	71	34.353	Takifugu_rubripes
ENSLOCG00000001861	-	53	42.090	ENSTRUG00000022374	si:dkey-33c12.4	79	36.823	Takifugu_rubripes
ENSLOCG00000001861	-	53	41.349	ENSTNIG00000010542	-	99	39.837	Tetraodon_nigroviridis
ENSLOCG00000001861	-	51	33.628	ENSTNIG00000001303	zgc:123010	89	33.628	Tetraodon_nigroviridis
ENSLOCG00000001861	-	52	35.821	ENSXETG00000033896	-	98	35.629	Xenopus_tropicalis
ENSLOCG00000001861	-	71	32.558	ENSXCOG00000012281	zgc:123010	96	32.558	Xiphophorus_couchianus
ENSLOCG00000001861	-	81	34.821	ENSXMAG00000018535	si:dkey-33c12.4	84	36.833	Xiphophorus_maculatus
ENSLOCG00000001861	-	71	33.262	ENSXMAG00000002598	zgc:123010	89	31.569	Xiphophorus_maculatus