EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001879 (Gene tree)
Gene ID: 102690560
Gene Symbol: mrpl40
Alias: fj54c06|wu:fj54c06|zgc:103495
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5254 bases
Position: chrLG20:766812-772065
Accession: ZDB-GENE-040912-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002176	MRP-L28	PF09812.9	1.5e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002181	-	1348	-	ENSLOCP00000002176	203 (aa)	-	W5M1B9

Gene Model

Click here to download ENSLOCG00000001879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001879	mrpl40	100	53.922	ENSG00000185608	MRPL40	98	53.922	Homo_sapiens
ENSLOCG00000001879	mrpl40	99	63.682	ENSAPOG00000021291	mrpl40	99	63.682	Acanthochromis_polyacanthus
ENSLOCG00000001879	mrpl40	87	57.627	ENSAMEG00000011421	MRPL40	85	57.627	Ailuropoda_melanoleuca
ENSLOCG00000001879	mrpl40	99	68.159	ENSACIG00000006672	mrpl40	99	68.159	Amphilophus_citrinellus
ENSLOCG00000001879	mrpl40	87	58.523	ENSACIG00000006717	MRPL40	80	56.647	Amphilophus_citrinellus
ENSLOCG00000001879	mrpl40	99	65.174	ENSAOCG00000003216	mrpl40	99	65.174	Amphiprion_ocellaris
ENSLOCG00000001879	mrpl40	99	64.677	ENSAPEG00000017401	mrpl40	99	64.677	Amphiprion_percula
ENSLOCG00000001879	mrpl40	82	72.189	ENSATEG00000020753	mrpl40	91	76.623	Anabas_testudineus
ENSLOCG00000001879	mrpl40	87	68.362	ENSAPLG00000004002	MRPL40	89	68.362	Anas_platyrhynchos
ENSLOCG00000001879	mrpl40	93	65.957	ENSACAG00000001053	MRPL40	94	65.957	Anolis_carolinensis
ENSLOCG00000001879	mrpl40	100	55.392	ENSANAG00000026579	MRPL40	98	55.392	Aotus_nancymaae
ENSLOCG00000001879	mrpl40	99	66.667	ENSACLG00000011106	mrpl40	99	66.667	Astatotilapia_calliptera
ENSLOCG00000001879	mrpl40	86	73.563	ENSAMXG00000029691	mrpl40	85	73.563	Astyanax_mexicanus
ENSLOCG00000001879	mrpl40	90	59.016	ENSBTAG00000019891	MRPL40	88	59.016	Bos_taurus
ENSLOCG00000001879	mrpl40	79	35.928	WBGene00018793	mrpl-40	61	38.462	Caenorhabditis_elegans
ENSLOCG00000001879	mrpl40	87	59.322	ENSCJAG00000001584	MRPL40	85	62.147	Callithrix_jacchus
ENSLOCG00000001879	mrpl40	87	59.322	ENSCAFG00020007995	MRPL40	85	59.322	Canis_lupus_dingo
ENSLOCG00000001879	mrpl40	90	57.377	ENSCHIG00000000131	-	88	57.377	Capra_hircus
ENSLOCG00000001879	mrpl40	74	52.632	ENSCHIG00000026872	-	75	54.762	Capra_hircus
ENSLOCG00000001879	mrpl40	90	61.749	ENSTSYG00000014747	MRPL40	90	61.749	Carlito_syrichta
ENSLOCG00000001879	mrpl40	68	64.029	ENSCAPG00000012876	MRPL40	97	64.029	Cavia_aperea
ENSLOCG00000001879	mrpl40	87	60.227	ENSCPOG00000026802	MRPL40	86	60.227	Cavia_porcellus
ENSLOCG00000001879	mrpl40	99	55.665	ENSCCAG00000037694	MRPL40	100	55.665	Cebus_capucinus
ENSLOCG00000001879	mrpl40	100	55.392	ENSCATG00000031418	-	98	55.392	Cercocebus_atys
ENSLOCG00000001879	mrpl40	87	58.757	ENSCATG00000043592	-	87	58.757	Cercocebus_atys
ENSLOCG00000001879	mrpl40	87	62.147	ENSCLAG00000016629	MRPL40	94	58.000	Chinchilla_lanigera
ENSLOCG00000001879	mrpl40	100	54.902	ENSCSAG00000011593	MRPL40	98	54.902	Chlorocebus_sabaeus
ENSLOCG00000001879	mrpl40	69	60.284	ENSCHOG00000008751	MRPL40	94	58.683	Choloepus_hoffmanni
ENSLOCG00000001879	mrpl40	87	65.537	ENSCPBG00000010618	MRPL40	92	65.537	Chrysemys_picta_bellii
ENSLOCG00000001879	mrpl40	63	41.732	ENSCSAVG00000001505	-	54	43.636	Ciona_savignyi
ENSLOCG00000001879	mrpl40	87	59.887	ENSCANG00000038600	MRPL40	94	59.887	Colobus_angolensis_palliatus
ENSLOCG00000001879	mrpl40	87	59.887	ENSCGRG00001019957	Mrpl40	85	59.887	Cricetulus_griseus_chok1gshd
ENSLOCG00000001879	mrpl40	87	59.887	ENSCGRG00000001245	Mrpl40	85	59.887	Cricetulus_griseus_crigri
ENSLOCG00000001879	mrpl40	85	72.093	ENSCSEG00000019750	mrpl40	84	72.093	Cynoglossus_semilaevis
ENSLOCG00000001879	mrpl40	74	46.405	ENSCSEG00000012296	-	83	41.060	Cynoglossus_semilaevis
ENSLOCG00000001879	mrpl40	93	66.332	ENSCVAG00000018229	mrpl40	98	66.332	Cyprinodon_variegatus
ENSLOCG00000001879	mrpl40	87	64.045	ENSDARG00000043554	mrpl40	100	57.843	Danio_rerio
ENSLOCG00000001879	mrpl40	86	50.857	ENSDNOG00000038360	-	84	50.857	Dasypus_novemcinctus
ENSLOCG00000001879	mrpl40	87	58.757	ENSDORG00000002949	Mrpl40	85	61.017	Dipodomys_ordii
ENSLOCG00000001879	mrpl40	76	41.358	FBgn0037892	mRpL40	58	43.478	Drosophila_melanogaster
ENSLOCG00000001879	mrpl40	50	62.376	ENSETEG00000006816	-	54	62.376	Echinops_telfairi
ENSLOCG00000001879	mrpl40	87	58.192	ENSEASG00005010493	MRPL40	86	58.192	Equus_asinus_asinus
ENSLOCG00000001879	mrpl40	68	61.151	ENSECAG00000009876	MRPL40	93	62.179	Equus_caballus
ENSLOCG00000001879	mrpl40	87	56.497	ENSEEUG00000009268	MRPL40	85	56.497	Erinaceus_europaeus
ENSLOCG00000001879	mrpl40	100	70.732	ENSELUG00000009281	mrpl40	100	70.732	Esox_lucius
ENSLOCG00000001879	mrpl40	87	58.192	ENSFCAG00000002752	MRPL40	85	58.192	Felis_catus
ENSLOCG00000001879	mrpl40	86	66.092	ENSFALG00000007981	MRPL40	87	66.092	Ficedula_albicollis
ENSLOCG00000001879	mrpl40	76	63.462	ENSFDAG00000020940	MRPL40	96	63.462	Fukomys_damarensis
ENSLOCG00000001879	mrpl40	86	68.000	ENSGALG00000053063	MRPL40	52	71.613	Gallus_gallus
ENSLOCG00000001879	mrpl40	100	67.157	ENSGAFG00000000522	mrpl40	100	67.157	Gambusia_affinis
ENSLOCG00000001879	mrpl40	87	66.102	ENSGAGG00000020728	MRPL40	90	63.830	Gopherus_agassizii
ENSLOCG00000001879	mrpl40	100	54.412	ENSGGOG00000012336	MRPL40	98	54.412	Gorilla_gorilla
ENSLOCG00000001879	mrpl40	99	66.667	ENSHBUG00000000404	mrpl40	99	66.667	Haplochromis_burtoni
ENSLOCG00000001879	mrpl40	76	64.744	ENSHGLG00000018525	MRPL40	96	64.744	Heterocephalus_glaber_female
ENSLOCG00000001879	mrpl40	87	59.659	ENSHGLG00100009563	MRPL40	85	59.659	Heterocephalus_glaber_male
ENSLOCG00000001879	mrpl40	100	64.216	ENSHCOG00000005731	mrpl40	100	64.078	Hippocampus_comes
ENSLOCG00000001879	mrpl40	100	65.049	ENSIPUG00000020288	Mrpl40	97	65.049	Ictalurus_punctatus
ENSLOCG00000001879	mrpl40	87	59.887	ENSSTOG00000002887	MRPL40	86	59.887	Ictidomys_tridecemlineatus
ENSLOCG00000001879	mrpl40	87	59.887	ENSJJAG00000017905	Mrpl40	86	59.887	Jaculus_jaculus
ENSLOCG00000001879	mrpl40	93	64.322	ENSKMAG00000003717	mrpl40	98	64.322	Kryptolebias_marmoratus
ENSLOCG00000001879	mrpl40	76	76.774	ENSLBEG00000025203	mrpl40	84	76.774	Labrus_bergylta
ENSLOCG00000001879	mrpl40	89	69.231	ENSLACG00000015070	MRPL40	96	65.517	Latimeria_chalumnae
ENSLOCG00000001879	mrpl40	87	59.322	ENSLAFG00000011061	MRPL40	85	59.322	Loxodonta_africana
ENSLOCG00000001879	mrpl40	87	57.062	ENSMFAG00000001495	-	87	57.062	Macaca_fascicularis
ENSLOCG00000001879	mrpl40	100	55.392	ENSMFAG00000032018	-	98	55.392	Macaca_fascicularis
ENSLOCG00000001879	mrpl40	68	59.712	ENSMFAG00000039890	-	97	51.053	Macaca_fascicularis
ENSLOCG00000001879	mrpl40	68	58.273	ENSMMUG00000006218	-	97	51.366	Macaca_mulatta
ENSLOCG00000001879	mrpl40	97	53.731	ENSMMUG00000030886	-	98	53.731	Macaca_mulatta
ENSLOCG00000001879	mrpl40	87	58.192	ENSMNEG00000041171	-	88	58.192	Macaca_nemestrina
ENSLOCG00000001879	mrpl40	85	53.371	ENSMNEG00000040492	-	78	60.417	Macaca_nemestrina
ENSLOCG00000001879	mrpl40	100	54.412	ENSMNEG00000034050	-	98	54.412	Macaca_nemestrina
ENSLOCG00000001879	mrpl40	87	58.757	ENSMLEG00000032552	-	87	58.757	Mandrillus_leucophaeus
ENSLOCG00000001879	mrpl40	87	59.887	ENSMLEG00000030926	-	94	59.887	Mandrillus_leucophaeus
ENSLOCG00000001879	mrpl40	68	58.993	ENSMLEG00000009022	-	97	50.526	Mandrillus_leucophaeus
ENSLOCG00000001879	mrpl40	100	67.647	ENSMAMG00000014249	mrpl40	84	76.744	Mastacembelus_armatus
ENSLOCG00000001879	mrpl40	99	66.667	ENSMZEG00005009853	mrpl40	99	66.667	Maylandia_zebra
ENSLOCG00000001879	mrpl40	76	70.323	ENSMGAG00000001177	MRPL40	100	70.323	Meleagris_gallopavo
ENSLOCG00000001879	mrpl40	87	61.017	ENSMAUG00000015350	Mrpl40	85	61.017	Mesocricetus_auratus
ENSLOCG00000001879	mrpl40	87	60.452	ENSMICG00000046066	MRPL40	85	60.452	Microcebus_murinus
ENSLOCG00000001879	mrpl40	87	62.360	ENSMOCG00000016970	Mrpl40	86	62.360	Microtus_ochrogaster
ENSLOCG00000001879	mrpl40	76	78.571	ENSMMOG00000012861	mrpl40	84	78.571	Mola_mola
ENSLOCG00000001879	mrpl40	86	64.972	ENSMODG00000010070	MRPL40	97	64.972	Monodelphis_domestica
ENSLOCG00000001879	mrpl40	99	64.677	ENSMALG00000020778	mrpl40	99	64.677	Monopterus_albus
ENSLOCG00000001879	mrpl40	87	62.147	MGP_CAROLIEiJ_G0020557	Mrpl40	96	65.385	Mus_caroli
ENSLOCG00000001879	mrpl40	86	62.286	ENSMUSG00000022706	Mrpl40	96	65.385	Mus_musculus
ENSLOCG00000001879	mrpl40	87	61.582	MGP_PahariEiJ_G0016262	Mrpl40	96	65.385	Mus_pahari
ENSLOCG00000001879	mrpl40	87	62.147	MGP_SPRETEiJ_G0021452	Mrpl40	96	65.385	Mus_spretus
ENSLOCG00000001879	mrpl40	87	58.192	ENSMPUG00000003865	MRPL40	85	58.192	Mustela_putorius_furo
ENSLOCG00000001879	mrpl40	87	59.887	ENSMLUG00000002456	-	85	59.887	Myotis_lucifugus
ENSLOCG00000001879	mrpl40	87	59.887	ENSMLUG00000024620	-	85	59.887	Myotis_lucifugus
ENSLOCG00000001879	mrpl40	89	58.564	ENSNGAG00000000304	Mrpl40	89	58.564	Nannospalax_galili
ENSLOCG00000001879	mrpl40	100	52.709	ENSNLEG00000005372	MRPL40	98	52.709	Nomascus_leucogenys
ENSLOCG00000001879	mrpl40	87	62.712	ENSODEG00000017051	MRPL40	85	62.712	Octodon_degus
ENSLOCG00000001879	mrpl40	99	66.169	ENSONIG00000014393	mrpl40	99	66.169	Oreochromis_niloticus
ENSLOCG00000001879	mrpl40	87	59.887	ENSOCUG00000009859	MRPL40	63	59.887	Oryctolagus_cuniculus
ENSLOCG00000001879	mrpl40	99	66.169	ENSORLG00000002574	mrpl40	99	66.169	Oryzias_latipes
ENSLOCG00000001879	mrpl40	100	66.019	ENSORLG00020005727	mrpl40	81	76.506	Oryzias_latipes_hni
ENSLOCG00000001879	mrpl40	100	65.049	ENSORLG00015015422	mrpl40	81	75.301	Oryzias_latipes_hsok
ENSLOCG00000001879	mrpl40	82	75.904	ENSOMEG00000017632	mrpl40	81	75.904	Oryzias_melastigma
ENSLOCG00000001879	mrpl40	87	61.236	ENSOGAG00000030071	MRPL40	94	61.236	Otolemur_garnettii
ENSLOCG00000001879	mrpl40	90	56.831	ENSOARG00000017561	MRPL40	88	56.831	Ovis_aries
ENSLOCG00000001879	mrpl40	100	54.902	ENSPPAG00000030349	MRPL40	98	54.902	Pan_paniscus
ENSLOCG00000001879	mrpl40	87	58.192	ENSPPRG00000004672	MRPL40	85	58.192	Panthera_pardus
ENSLOCG00000001879	mrpl40	87	58.192	ENSPTIG00000003393	MRPL40	85	58.192	Panthera_tigris_altaica
ENSLOCG00000001879	mrpl40	100	54.902	ENSPTRG00000014061	MRPL40	98	54.902	Pan_troglodytes
ENSLOCG00000001879	mrpl40	87	59.322	ENSPANG00000000595	-	87	59.322	Papio_anubis
ENSLOCG00000001879	mrpl40	100	55.392	ENSPANG00000007370	-	98	55.392	Papio_anubis
ENSLOCG00000001879	mrpl40	99	68.317	ENSPKIG00000024494	mrpl40	99	68.317	Paramormyrops_kingsleyae
ENSLOCG00000001879	mrpl40	82	64.458	ENSPSIG00000003055	MRPL40	100	64.458	Pelodiscus_sinensis
ENSLOCG00000001879	mrpl40	93	65.426	ENSPMGG00000018388	mrpl40	83	75.484	Periophthalmus_magnuspinnatus
ENSLOCG00000001879	mrpl40	87	62.712	ENSPEMG00000017933	Mrpl40	85	62.712	Peromyscus_maniculatus_bairdii
ENSLOCG00000001879	mrpl40	92	54.774	ENSPCIG00000025479	MRPL40	79	63.975	Phascolarctos_cinereus
ENSLOCG00000001879	mrpl40	100	66.184	ENSPFOG00000012506	mrpl40	97	66.184	Poecilia_formosa
ENSLOCG00000001879	mrpl40	100	66.667	ENSPLAG00000017335	mrpl40	100	66.667	Poecilia_latipinna
ENSLOCG00000001879	mrpl40	100	66.667	ENSPMEG00000003881	mrpl40	100	66.667	Poecilia_mexicana
ENSLOCG00000001879	mrpl40	100	66.176	ENSPREG00000011448	mrpl40	100	66.176	Poecilia_reticulata
ENSLOCG00000001879	mrpl40	87	58.757	ENSPPYG00000011578	MRPL40	94	58.757	Pongo_abelii
ENSLOCG00000001879	mrpl40	87	47.727	ENSPCAG00000007834	MRPL40	59	61.157	Procavia_capensis
ENSLOCG00000001879	mrpl40	100	54.902	ENSPCOG00000014413	MRPL40	98	54.902	Propithecus_coquereli
ENSLOCG00000001879	mrpl40	99	66.667	ENSPNYG00000008216	mrpl40	99	66.667	Pundamilia_nyererei
ENSLOCG00000001879	mrpl40	86	74.138	ENSPNAG00000000310	mrpl40	99	75.325	Pygocentrus_nattereri
ENSLOCG00000001879	mrpl40	87	61.017	ENSRNOG00000049686	Mrpl40	85	61.017	Rattus_norvegicus
ENSLOCG00000001879	mrpl40	100	56.373	ENSRBIG00000023060	MRPL40	98	56.373	Rhinopithecus_bieti
ENSLOCG00000001879	mrpl40	100	55.392	ENSRROG00000043837	MRPL40	98	55.392	Rhinopithecus_roxellana
ENSLOCG00000001879	mrpl40	100	56.373	ENSSBOG00000031050	MRPL40	98	56.373	Saimiri_boliviensis_boliviensis
ENSLOCG00000001879	mrpl40	77	65.409	ENSSHAG00000010239	MRPL40	98	65.409	Sarcophilus_harrisii
ENSLOCG00000001879	mrpl40	86	74.286	ENSSFOG00015014220	mrpl40	89	74.286	Scleropages_formosus
ENSLOCG00000001879	mrpl40	99	62.871	ENSSMAG00000006340	mrpl40	99	62.871	Scophthalmus_maximus
ENSLOCG00000001879	mrpl40	93	62.500	ENSSDUG00000022994	mrpl40	98	62.500	Seriola_dumerili
ENSLOCG00000001879	mrpl40	93	62.500	ENSSLDG00000009671	mrpl40	98	62.500	Seriola_lalandi_dorsalis
ENSLOCG00000001879	mrpl40	87	60.452	ENSSARG00000003051	MRPL40	85	60.452	Sorex_araneus
ENSLOCG00000001879	mrpl40	94	61.538	ENSSPUG00000015559	MRPL40	98	61.538	Sphenodon_punctatus
ENSLOCG00000001879	mrpl40	99	63.682	ENSSPAG00000015481	mrpl40	99	63.682	Stegastes_partitus
ENSLOCG00000001879	mrpl40	87	61.017	ENSSSCG00000034014	MRPL40	85	61.017	Sus_scrofa
ENSLOCG00000001879	mrpl40	60	68.852	ENSTGUG00000008534	MRPL40	100	68.831	Taeniopygia_guttata
ENSLOCG00000001879	mrpl40	98	66.834	ENSTRUG00000025904	mrpl40	99	66.834	Takifugu_rubripes
ENSLOCG00000001879	mrpl40	90	59.563	ENSTTRG00000014932	MRPL40	90	59.563	Tursiops_truncatus
ENSLOCG00000001879	mrpl40	99	54.455	ENSUAMG00000007667	MRPL40	85	58.757	Ursus_americanus
ENSLOCG00000001879	mrpl40	93	52.105	ENSUMAG00000006804	MRPL40	86	56.364	Ursus_maritimus
ENSLOCG00000001879	mrpl40	87	58.757	ENSVVUG00000025360	-	85	58.757	Vulpes_vulpes
ENSLOCG00000001879	mrpl40	92	46.597	ENSVVUG00000020719	-	83	49.143	Vulpes_vulpes
ENSLOCG00000001879	mrpl40	86	68.391	ENSXETG00000018600	mrpl40	87	68.391	Xenopus_tropicalis
ENSLOCG00000001879	mrpl40	100	64.706	ENSXCOG00000002135	mrpl40	100	64.706	Xiphophorus_couchianus
ENSLOCG00000001879	mrpl40	100	65.196	ENSXMAG00000014595	mrpl40	100	65.196	Xiphophorus_maculatus