EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000001887 (Gene tree)
Gene ID: 102683542
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 2671 bases
Position: chrLG14:2482805-2485475
Accession: 102683542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002186	tRNA_int_endo	PF01974.17	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002191	-	840	XM_006637490	ENSLOCP00000002186	279 (aa)	-	W5M1C9

Gene Model

Click here to download ENSLOCG00000001887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001887	tsen34	97	40.260	ENSG00000170892	TSEN34	99	40.260	Homo_sapiens
ENSLOCG00000001887	tsen34	97	57.040	ENSAPOG00000001248	tsen34	94	57.040	Acanthochromis_polyacanthus
ENSLOCG00000001887	tsen34	96	52.574	ENSAPOG00000008579	-	93	55.769	Acanthochromis_polyacanthus
ENSLOCG00000001887	tsen34	91	55.253	ENSAPOG00000012557	-	86	55.253	Acanthochromis_polyacanthus
ENSLOCG00000001887	tsen34	89	39.161	ENSAMEG00000004585	TSEN34	100	39.161	Ailuropoda_melanoleuca
ENSLOCG00000001887	tsen34	99	57.040	ENSACIG00000007110	tsen34	89	57.040	Amphilophus_citrinellus
ENSLOCG00000001887	tsen34	97	58.123	ENSAOCG00000006905	tsen34	94	58.123	Amphiprion_ocellaris
ENSLOCG00000001887	tsen34	97	57.762	ENSAPEG00000019171	tsen34	94	57.762	Amphiprion_percula
ENSLOCG00000001887	tsen34	97	54.874	ENSATEG00000019800	tsen34	95	55.235	Anabas_testudineus
ENSLOCG00000001887	tsen34	97	43.182	ENSACAG00000016189	TSEN34	99	43.182	Anolis_carolinensis
ENSLOCG00000001887	tsen34	97	40.909	ENSANAG00000026113	TSEN34	99	40.909	Aotus_nancymaae
ENSLOCG00000001887	tsen34	99	54.182	ENSACLG00000009661	tsen34	93	54.545	Astatotilapia_calliptera
ENSLOCG00000001887	tsen34	97	63.406	ENSAMXG00000017568	tsen34	87	63.406	Astyanax_mexicanus
ENSLOCG00000001887	tsen34	97	38.511	ENSBTAG00000006486	TSEN34	99	38.511	Bos_taurus
ENSLOCG00000001887	tsen34	97	42.123	ENSCJAG00000001128	TSEN34	99	42.177	Callithrix_jacchus
ENSLOCG00000001887	tsen34	97	37.942	ENSCAFG00000002675	TSEN34	99	40.000	Canis_familiaris
ENSLOCG00000001887	tsen34	97	38.188	ENSCAFG00020018350	TSEN34	99	39.286	Canis_lupus_dingo
ENSLOCG00000001887	tsen34	97	39.274	ENSCHIG00000020705	TSEN34	99	39.274	Capra_hircus
ENSLOCG00000001887	tsen34	95	38.796	ENSTSYG00000028200	TSEN34	97	37.874	Carlito_syrichta
ENSLOCG00000001887	tsen34	50	48.936	ENSCAPG00000012811	-	71	48.936	Cavia_aperea
ENSLOCG00000001887	tsen34	97	39.610	ENSCPOG00000012672	TSEN34	99	39.677	Cavia_porcellus
ENSLOCG00000001887	tsen34	97	42.568	ENSCCAG00000036023	TSEN34	99	42.568	Cebus_capucinus
ENSLOCG00000001887	tsen34	93	39.189	ENSCATG00000033390	TSEN34	93	39.189	Cercocebus_atys
ENSLOCG00000001887	tsen34	97	41.722	ENSCLAG00000000618	TSEN34	99	41.722	Chinchilla_lanigera
ENSLOCG00000001887	tsen34	97	41.234	ENSCSAG00000001891	TSEN34	99	41.234	Chlorocebus_sabaeus
ENSLOCG00000001887	tsen34	97	40.909	ENSCANG00000040984	TSEN34	99	40.909	Colobus_angolensis_palliatus
ENSLOCG00000001887	tsen34	97	40.193	ENSCGRG00001006296	Tsen34	99	39.297	Cricetulus_griseus_chok1gshd
ENSLOCG00000001887	tsen34	99	52.837	ENSCSEG00000006278	tsen34	91	53.191	Cynoglossus_semilaevis
ENSLOCG00000001887	tsen34	100	52.837	ENSDARG00000061370	tsen34	90	53.191	Danio_rerio
ENSLOCG00000001887	tsen34	97	37.338	ENSDNOG00000039332	TSEN34	99	37.338	Dasypus_novemcinctus
ENSLOCG00000001887	tsen34	97	41.967	ENSDORG00000029071	Tsen34	99	41.967	Dipodomys_ordii
ENSLOCG00000001887	tsen34	67	55.357	ENSEBUG00000000381	-	75	55.357	Eptatretus_burgeri
ENSLOCG00000001887	tsen34	97	38.636	ENSEASG00005021580	TSEN34	99	38.636	Equus_asinus_asinus
ENSLOCG00000001887	tsen34	97	38.636	ENSECAG00000019651	TSEN34	85	38.636	Equus_caballus
ENSLOCG00000001887	tsen34	52	35.912	ENSEEUG00000005692	TSEN34	64	35.912	Erinaceus_europaeus
ENSLOCG00000001887	tsen34	97	58.929	ENSELUG00000006262	tsen34	91	58.929	Esox_lucius
ENSLOCG00000001887	tsen34	97	38.961	ENSFCAG00000014045	TSEN34	99	38.961	Felis_catus
ENSLOCG00000001887	tsen34	78	39.431	ENSFDAG00000017995	TSEN34	97	39.113	Fukomys_damarensis
ENSLOCG00000001887	tsen34	97	54.779	ENSFHEG00000008791	tsen34	92	54.380	Fundulus_heteroclitus
ENSLOCG00000001887	tsen34	72	55.172	ENSGMOG00000001961	tsen34	99	55.172	Gadus_morhua
ENSLOCG00000001887	tsen34	97	52.574	ENSGAFG00000016880	tsen34	94	54.745	Gambusia_affinis
ENSLOCG00000001887	tsen34	99	48.299	ENSGACG00000004800	tsen34	100	50.000	Gasterosteus_aculeatus
ENSLOCG00000001887	tsen34	99	48.601	ENSGAGG00000008982	TSEN34	73	48.601	Gopherus_agassizii
ENSLOCG00000001887	tsen34	97	41.584	ENSGGOG00000008197	TSEN34	99	41.584	Gorilla_gorilla
ENSLOCG00000001887	tsen34	99	55.273	ENSHBUG00000016593	tsen34	84	55.273	Haplochromis_burtoni
ENSLOCG00000001887	tsen34	97	39.735	ENSHGLG00000017619	TSEN34	99	39.803	Heterocephalus_glaber_female
ENSLOCG00000001887	tsen34	99	50.360	ENSHCOG00000001368	tsen34	96	50.360	Hippocampus_comes
ENSLOCG00000001887	tsen34	97	61.484	ENSIPUG00000008359	tsen34	88	61.484	Ictalurus_punctatus
ENSLOCG00000001887	tsen34	94	39.597	ENSSTOG00000023816	TSEN34	96	40.532	Ictidomys_tridecemlineatus
ENSLOCG00000001887	tsen34	97	39.297	ENSJJAG00000016301	Tsen34	99	39.297	Jaculus_jaculus
ENSLOCG00000001887	tsen34	97	56.985	ENSKMAG00000007181	tsen34	85	56.569	Kryptolebias_marmoratus
ENSLOCG00000001887	tsen34	97	54.779	ENSLBEG00000015001	tsen34	93	54.779	Labrus_bergylta
ENSLOCG00000001887	tsen34	68	40.851	ENSLACG00000013346	-	98	40.851	Latimeria_chalumnae
ENSLOCG00000001887	tsen34	97	38.217	ENSLAFG00000015215	TSEN34	99	39.490	Loxodonta_africana
ENSLOCG00000001887	tsen34	97	40.909	ENSMFAG00000044825	TSEN34	99	40.909	Macaca_fascicularis
ENSLOCG00000001887	tsen34	97	40.909	ENSMMUG00000016571	TSEN34	99	40.909	Macaca_mulatta
ENSLOCG00000001887	tsen34	97	40.909	ENSMNEG00000045457	TSEN34	99	40.909	Macaca_nemestrina
ENSLOCG00000001887	tsen34	93	35.955	ENSMLEG00000034295	TSEN34	92	35.955	Mandrillus_leucophaeus
ENSLOCG00000001887	tsen34	97	55.474	ENSMAMG00000018407	tsen34	95	55.474	Mastacembelus_armatus
ENSLOCG00000001887	tsen34	99	55.273	ENSMZEG00005002313	tsen34	93	55.273	Maylandia_zebra
ENSLOCG00000001887	tsen34	76	34.400	ENSMAUG00000019716	Tsen34	80	34.524	Mesocricetus_auratus
ENSLOCG00000001887	tsen34	97	39.542	ENSMICG00000002409	TSEN34	99	39.610	Microcebus_murinus
ENSLOCG00000001887	tsen34	97	39.172	ENSMOCG00000022190	Tsen34	99	39.873	Microtus_ochrogaster
ENSLOCG00000001887	tsen34	97	50.836	ENSMMOG00000009551	tsen34	92	53.571	Mola_mola
ENSLOCG00000001887	tsen34	97	44.040	ENSMODG00000003984	-	79	45.253	Monodelphis_domestica
ENSLOCG00000001887	tsen34	97	54.152	ENSMALG00000018918	tsen34	94	54.874	Monopterus_albus
ENSLOCG00000001887	tsen34	97	38.835	MGP_CAROLIEiJ_G0029099	Tsen34	99	38.835	Mus_caroli
ENSLOCG00000001887	tsen34	97	39.677	ENSMUSG00000035585	Tsen34	99	39.490	Mus_musculus
ENSLOCG00000001887	tsen34	97	39.550	MGP_PahariEiJ_G0020968	Tsen34	99	39.550	Mus_pahari
ENSLOCG00000001887	tsen34	97	39.809	MGP_SPRETEiJ_G0030152	Tsen34	99	39.809	Mus_spretus
ENSLOCG00000001887	tsen34	97	39.550	ENSMPUG00000010373	TSEN34	99	39.806	Mustela_putorius_furo
ENSLOCG00000001887	tsen34	97	38.782	ENSMLUG00000016894	TSEN34	99	38.782	Myotis_lucifugus
ENSLOCG00000001887	tsen34	76	35.081	ENSNGAG00000016187	Tsen34	92	35.200	Nannospalax_galili
ENSLOCG00000001887	tsen34	99	55.396	ENSNBRG00000008640	tsen34	98	55.839	Neolamprologus_brichardi
ENSLOCG00000001887	tsen34	97	41.060	ENSNLEG00000006309	TSEN34	99	41.060	Nomascus_leucogenys
ENSLOCG00000001887	tsen34	94	49.814	ENSMEUG00000002978	TSEN34	96	49.814	Notamacropus_eugenii
ENSLOCG00000001887	tsen34	97	39.297	ENSODEG00000000096	TSEN34	99	39.297	Octodon_degus
ENSLOCG00000001887	tsen34	99	55.957	ENSONIG00000017253	tsen34	99	55.957	Oreochromis_niloticus
ENSLOCG00000001887	tsen34	97	52.381	ENSORLG00015012740	tsen34	94	52.381	Oryzias_latipes_hsok
ENSLOCG00000001887	tsen34	97	53.114	ENSOMEG00000016771	tsen34	93	53.114	Oryzias_melastigma
ENSLOCG00000001887	tsen34	97	41.234	ENSOGAG00000006966	TSEN34	99	41.234	Otolemur_garnettii
ENSLOCG00000001887	tsen34	79	36.047	ENSOARG00000002763	TSEN34	91	36.996	Ovis_aries
ENSLOCG00000001887	tsen34	97	41.558	ENSPPAG00000036935	TSEN34	99	41.558	Pan_paniscus
ENSLOCG00000001887	tsen34	97	39.286	ENSPPRG00000011779	TSEN34	99	39.286	Panthera_pardus
ENSLOCG00000001887	tsen34	97	40.260	ENSPTRG00000044768	-	99	40.260	Pan_troglodytes
ENSLOCG00000001887	tsen34	97	40.260	ENSPTRG00000011448	TSEN34	99	40.260	Pan_troglodytes
ENSLOCG00000001887	tsen34	97	40.909	ENSPANG00000012101	TSEN34	99	40.909	Papio_anubis
ENSLOCG00000001887	tsen34	99	62.007	ENSPKIG00000014674	tsen34	94	62.007	Paramormyrops_kingsleyae
ENSLOCG00000001887	tsen34	97	39.414	ENSPEMG00000014535	Tsen34	99	39.806	Peromyscus_maniculatus_bairdii
ENSLOCG00000001887	tsen34	97	54.779	ENSPFOG00000008679	tsen34	94	54.745	Poecilia_formosa
ENSLOCG00000001887	tsen34	97	54.945	ENSPLAG00000017309	tsen34	94	55.109	Poecilia_latipinna
ENSLOCG00000001887	tsen34	97	54.779	ENSPMEG00000005235	tsen34	94	54.745	Poecilia_mexicana
ENSLOCG00000001887	tsen34	97	54.945	ENSPREG00000021784	tsen34	93	54.545	Poecilia_reticulata
ENSLOCG00000001887	tsen34	97	40.260	ENSPPYG00000010376	TSEN34	94	40.260	Pongo_abelii
ENSLOCG00000001887	tsen34	97	38.312	ENSPCAG00000012359	TSEN34	99	38.312	Procavia_capensis
ENSLOCG00000001887	tsen34	97	39.216	ENSPCOG00000013843	TSEN34	99	39.935	Propithecus_coquereli
ENSLOCG00000001887	tsen34	97	39.803	ENSPVAG00000015570	TSEN34	99	39.803	Pteropus_vampyrus
ENSLOCG00000001887	tsen34	99	55.273	ENSPNYG00000024090	tsen34	73	55.273	Pundamilia_nyererei
ENSLOCG00000001887	tsen34	97	60.573	ENSPNAG00000028698	tsen34	86	60.573	Pygocentrus_nattereri
ENSLOCG00000001887	tsen34	97	39.677	ENSRNOG00000059572	Tsen34l1	99	39.677	Rattus_norvegicus
ENSLOCG00000001887	tsen34	97	39.677	ENSRNOG00000055179	Tsen34	99	39.677	Rattus_norvegicus
ENSLOCG00000001887	tsen34	97	40.909	ENSRBIG00000034430	TSEN34	99	40.909	Rhinopithecus_bieti
ENSLOCG00000001887	tsen34	97	40.584	ENSRROG00000024217	TSEN34	99	40.584	Rhinopithecus_roxellana
ENSLOCG00000001887	tsen34	93	40.203	ENSSBOG00000016017	TSEN34	95	40.411	Saimiri_boliviensis_boliviensis
ENSLOCG00000001887	tsen34	68	59.278	ENSSFOG00015017579	tsen34	82	59.278	Scleropages_formosus
ENSLOCG00000001887	tsen34	97	55.474	ENSSMAG00000005214	tsen34	95	55.474	Scophthalmus_maximus
ENSLOCG00000001887	tsen34	97	56.115	ENSSDUG00000005391	tsen34	91	56.115	Seriola_dumerili
ENSLOCG00000001887	tsen34	97	56.475	ENSSLDG00000006144	tsen34	87	56.475	Seriola_lalandi_dorsalis
ENSLOCG00000001887	tsen34	79	39.147	ENSSARG00000005857	TSEN34	68	39.147	Sorex_araneus
ENSLOCG00000001887	tsen34	97	44.251	ENSSPUG00000008447	TSEN34	99	44.251	Sphenodon_punctatus
ENSLOCG00000001887	tsen34	97	56.044	ENSSPAG00000010512	tsen34	92	54.579	Stegastes_partitus
ENSLOCG00000001887	tsen34	97	38.835	ENSSSCG00000003268	TSEN34	99	38.511	Sus_scrofa
ENSLOCG00000001887	tsen34	98	47.273	ENSTRUG00000000787	tsen34	89	48.364	Takifugu_rubripes
ENSLOCG00000001887	tsen34	99	51.370	ENSTNIG00000001937	-	100	51.370	Tetraodon_nigroviridis
ENSLOCG00000001887	tsen34	97	52.218	ENSTNIG00000011201	tsen34	100	52.349	Tetraodon_nigroviridis
ENSLOCG00000001887	tsen34	97	38.636	ENSTTRG00000006571	TSEN34	99	38.636	Tursiops_truncatus
ENSLOCG00000001887	tsen34	97	39.610	ENSUAMG00000008701	TSEN34	99	38.961	Ursus_americanus
ENSLOCG00000001887	tsen34	97	38.188	ENSVVUG00000008211	TSEN34	99	39.286	Vulpes_vulpes
ENSLOCG00000001887	tsen34	97	42.321	ENSXETG00000004597	tsen34	99	42.321	Xenopus_tropicalis
ENSLOCG00000001887	tsen34	97	54.745	ENSXMAG00000024266	tsen34	94	54.745	Xiphophorus_maculatus