EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000001942 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 39066 bases
Position: chrLG4:3924224-3963289
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002253	Nucleoplasmin	PF03066.15	6.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002258	-	876	-	ENSLOCP00000002253	292 (aa)	-	W5M1J5

Gene Model

Click here to download ENSLOCG00000001942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000001942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000001942	npm1b	83	39.015	ENSLOCG00000009683	npm1a	92	38.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000001942	npm1b	100	49.495	ENSAPOG00000004268	npm1b	93	48.311	Acanthochromis_polyacanthus
ENSLOCG00000001942	npm1b	100	49.495	ENSAOCG00000012549	npm1b	93	48.311	Amphiprion_ocellaris
ENSLOCG00000001942	npm1b	100	47.138	ENSAPEG00000000868	npm1b	93	46.959	Amphiprion_percula
ENSLOCG00000001942	npm1b	100	47.811	ENSATEG00000006254	npm1b	93	47.297	Anabas_testudineus
ENSLOCG00000001942	npm1b	99	37.419	ENSACAG00000015626	-	94	37.742	Anolis_carolinensis
ENSLOCG00000001942	npm1b	99	51.351	ENSAMXG00000042148	npm1b	94	50.338	Astyanax_mexicanus
ENSLOCG00000001942	npm1b	99	37.624	ENSCPBG00000021221	-	56	37.624	Chrysemys_picta_bellii
ENSLOCG00000001942	npm1b	99	45.973	ENSCSEG00000004530	npm1b	93	44.966	Cynoglossus_semilaevis
ENSLOCG00000001942	npm1b	100	46.075	ENSCVAG00000013016	npm1b	94	44.710	Cyprinodon_variegatus
ENSLOCG00000001942	npm1b	99	54.452	ENSDARG00000037675	npm1b	94	53.767	Danio_rerio
ENSLOCG00000001942	npm1b	100	51.495	ENSELUG00000022123	npm1b	93	51.163	Esox_lucius
ENSLOCG00000001942	npm1b	99	37.584	ENSFALG00000003320	-	93	37.584	Ficedula_albicollis
ENSLOCG00000001942	npm1b	100	47.315	ENSFHEG00000020794	npm1b	94	46.644	Fundulus_heteroclitus
ENSLOCG00000001942	npm1b	99	43.894	ENSGMOG00000002689	npm1b	94	43.564	Gadus_morhua
ENSLOCG00000001942	npm1b	99	39.465	ENSGALG00000002197	-	68	39.597	Gallus_gallus
ENSLOCG00000001942	npm1b	100	47.869	ENSGAFG00000017709	npm1b	94	46.557	Gambusia_affinis
ENSLOCG00000001942	npm1b	99	50.676	ENSGACG00000016706	npm1b	94	49.831	Gasterosteus_aculeatus
ENSLOCG00000001942	npm1b	99	38.487	ENSGAGG00000020250	-	93	38.284	Gopherus_agassizii
ENSLOCG00000001942	npm1b	100	48.649	ENSHBUG00000019903	npm1b	89	47.635	Haplochromis_burtoni
ENSLOCG00000001942	npm1b	99	46.102	ENSHCOG00000003895	npm1b	93	46.102	Hippocampus_comes
ENSLOCG00000001942	npm1b	99	50.847	ENSIPUG00000020165	npm1b	94	49.831	Ictalurus_punctatus
ENSLOCG00000001942	npm1b	99	51.689	ENSKMAG00000008260	npm1b	94	50.338	Kryptolebias_marmoratus
ENSLOCG00000001942	npm1b	96	37.209	ENSLACG00000001779	-	99	38.356	Latimeria_chalumnae
ENSLOCG00000001942	npm1b	77	51.739	ENSMAMG00000015335	npm1b	99	50.870	Mastacembelus_armatus
ENSLOCG00000001942	npm1b	99	39.130	ENSMGAG00000001591	-	100	39.262	Meleagris_gallopavo
ENSLOCG00000001942	npm1b	81	49.793	ENSMALG00000015383	npm1b	93	49.167	Monopterus_albus
ENSLOCG00000001942	npm1b	100	44.667	ENSONIG00000001397	npm1b	93	44.224	Oreochromis_niloticus
ENSLOCG00000001942	npm1b	99	40.411	ENSOMEG00000003414	npm1b	92	39.726	Oryzias_melastigma
ENSLOCG00000001942	npm1b	100	48.000	ENSPKIG00000020050	npm1b	94	49.333	Paramormyrops_kingsleyae
ENSLOCG00000001942	npm1b	99	39.145	ENSPSIG00000011204	-	90	39.604	Pelodiscus_sinensis
ENSLOCG00000001942	npm1b	100	48.822	ENSPFOG00000018357	npm1b	94	47.475	Poecilia_formosa
ENSLOCG00000001942	npm1b	99	52.881	ENSPNAG00000005498	npm1b	94	50.169	Pygocentrus_nattereri
ENSLOCG00000001942	npm1b	100	52.862	ENSSFOG00015005064	npm1b	95	52.013	Scleropages_formosus
ENSLOCG00000001942	npm1b	100	49.324	ENSSMAG00000008088	npm1b	93	49.153	Scophthalmus_maximus
ENSLOCG00000001942	npm1b	100	49.662	ENSSDUG00000007726	npm1b	93	49.492	Seriola_dumerili
ENSLOCG00000001942	npm1b	100	49.324	ENSSLDG00000021396	npm1b	93	49.153	Seriola_lalandi_dorsalis
ENSLOCG00000001942	npm1b	59	42.938	ENSSPUG00000015604	-	85	44.633	Sphenodon_punctatus
ENSLOCG00000001942	npm1b	100	48.485	ENSSPAG00000011152	npm1b	93	48.311	Stegastes_partitus
ENSLOCG00000001942	npm1b	99	38.333	ENSTGUG00000014970	-	100	37.458	Taeniopygia_guttata
ENSLOCG00000001942	npm1b	100	47.315	ENSTRUG00000008105	npm1b	89	45.608	Takifugu_rubripes
ENSLOCG00000001942	npm1b	100	44.000	ENSTNIG00000013057	npm1b	93	44.147	Tetraodon_nigroviridis
ENSLOCG00000001942	npm1b	99	36.039	ENSXETG00000008403	npm1	92	38.188	Xenopus_tropicalis
ENSLOCG00000001942	npm1b	100	48.148	ENSXMAG00000001986	npm1b	94	47.811	Xiphophorus_maculatus