EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002047 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 1413 bases
Position: chrLG28:1660467-1661879
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002373	zf-CCCH	PF00642.24	2e-30	1	3
ENSLOCP00000002373	zf-CCCH	PF00642.24	2e-30	2	3
ENSLOCP00000002373	zf-CCCH	PF00642.24	2e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002378	-	712	-	ENSLOCP00000002373	196 (aa)	-	W5M1W5

Gene Model

Click here to download ENSLOCG00000002047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002047	cth1	97	51.196	ENSAPOG00000012552	cth1	73	51.429	Acanthochromis_polyacanthus
ENSLOCG00000002047	cth1	82	54.696	ENSACIG00000016026	cth1	78	49.545	Amphilophus_citrinellus
ENSLOCG00000002047	cth1	98	51.163	ENSAOCG00000001644	cth1	69	51.163	Amphiprion_ocellaris
ENSLOCG00000002047	cth1	98	51.163	ENSAPEG00000008930	cth1	69	51.163	Amphiprion_percula
ENSLOCG00000002047	cth1	99	49.315	ENSATEG00000002281	cth1	65	49.315	Anabas_testudineus
ENSLOCG00000002047	cth1	97	51.691	ENSACLG00000015353	cth1	83	51.208	Astatotilapia_calliptera
ENSLOCG00000002047	cth1	98	58.621	ENSAMXG00000025717	cth1	64	58.128	Astyanax_mexicanus
ENSLOCG00000002047	cth1	98	49.545	ENSCSEG00000014617	cth1	59	54.839	Cynoglossus_semilaevis
ENSLOCG00000002047	cth1	98	57.073	ENSDARG00000057328	cth1	63	57.561	Danio_rerio
ENSLOCG00000002047	cth1	97	54.673	ENSELUG00000012738	cth1	63	55.140	Esox_lucius
ENSLOCG00000002047	cth1	97	50.467	ENSFHEG00000022665	cth1	68	50.467	Fundulus_heteroclitus
ENSLOCG00000002047	cth1	98	52.582	ENSGMOG00000007360	cth1	72	52.582	Gadus_morhua
ENSLOCG00000002047	cth1	97	48.131	ENSGAFG00000019288	cth1	67	48.131	Gambusia_affinis
ENSLOCG00000002047	cth1	97	49.302	ENSGACG00000000802	cth1	73	49.302	Gasterosteus_aculeatus
ENSLOCG00000002047	cth1	98	51.675	ENSHBUG00000014400	cth1	79	51.196	Haplochromis_burtoni
ENSLOCG00000002047	cth1	97	51.269	ENSHCOG00000010276	cth1	73	51.269	Hippocampus_comes
ENSLOCG00000002047	cth1	100	59.223	ENSIPUG00000018040	cth1	64	59.223	Ictalurus_punctatus
ENSLOCG00000002047	cth1	98	49.057	ENSKMAG00000005944	cth1	75	49.057	Kryptolebias_marmoratus
ENSLOCG00000002047	cth1	98	49.767	ENSLBEG00000019253	cth1	67	50.233	Labrus_bergylta
ENSLOCG00000002047	cth1	99	44.700	ENSMAMG00000001525	cth1	75	45.161	Mastacembelus_armatus
ENSLOCG00000002047	cth1	98	51.196	ENSMZEG00005022335	cth1	79	51.196	Maylandia_zebra
ENSLOCG00000002047	cth1	90	49.746	ENSMMOG00000020518	cth1	67	49.746	Mola_mola
ENSLOCG00000002047	cth1	98	47.393	ENSMALG00000020738	cth1	74	48.341	Monopterus_albus
ENSLOCG00000002047	cth1	82	58.385	ENSNBRG00000022789	cth1	65	57.143	Neolamprologus_brichardi
ENSLOCG00000002047	cth1	99	51.613	ENSONIG00000021318	cth1	80	50.691	Oreochromis_niloticus
ENSLOCG00000002047	cth1	90	52.577	ENSORLG00000022847	cth1	70	52.577	Oryzias_latipes
ENSLOCG00000002047	cth1	90	52.062	ENSORLG00020011979	cth1	70	52.062	Oryzias_latipes_hni
ENSLOCG00000002047	cth1	90	52.577	ENSORLG00015013084	cth1	70	52.577	Oryzias_latipes_hsok
ENSLOCG00000002047	cth1	90	51.579	ENSOMEG00000005809	cth1	62	53.684	Oryzias_melastigma
ENSLOCG00000002047	cth1	98	61.000	ENSPKIG00000015883	cth1	61	60.500	Paramormyrops_kingsleyae
ENSLOCG00000002047	cth1	96	49.315	ENSPMGG00000004275	cth1	67	49.315	Periophthalmus_magnuspinnatus
ENSLOCG00000002047	cth1	97	50.242	ENSPFOG00000013583	cth1	62	50.242	Poecilia_formosa
ENSLOCG00000002047	cth1	97	49.758	ENSPLAG00000018158	cth1	64	49.758	Poecilia_latipinna
ENSLOCG00000002047	cth1	97	50.242	ENSPMEG00000005744	cth1	66	50.242	Poecilia_mexicana
ENSLOCG00000002047	cth1	97	50.990	ENSPREG00000004099	cth1	68	50.485	Poecilia_reticulata
ENSLOCG00000002047	cth1	82	60.494	ENSPNYG00000016705	cth1	67	59.877	Pundamilia_nyererei
ENSLOCG00000002047	cth1	98	57.635	ENSPNAG00000013147	cth1	63	57.635	Pygocentrus_nattereri
ENSLOCG00000002047	cth1	89	58.152	ENSSFOG00015017190	cth1	59	58.696	Scleropages_formosus
ENSLOCG00000002047	cth1	98	50.230	ENSSMAG00000007977	cth1	73	50.230	Scophthalmus_maximus
ENSLOCG00000002047	cth1	98	49.321	ENSSDUG00000004321	cth1	77	49.321	Seriola_dumerili
ENSLOCG00000002047	cth1	82	55.249	ENSSLDG00000010023	-	68	49.107	Seriola_lalandi_dorsalis
ENSLOCG00000002047	cth1	82	55.249	ENSSLDG00000004516	-	67	49.107	Seriola_lalandi_dorsalis
ENSLOCG00000002047	cth1	82	55.249	ENSSLDG00000012760	cth1	67	49.550	Seriola_lalandi_dorsalis
ENSLOCG00000002047	cth1	99	47.222	ENSSPAG00000018659	cth1	68	49.537	Stegastes_partitus
ENSLOCG00000002047	cth1	98	49.065	ENSTRUG00000012770	cth1	74	48.598	Takifugu_rubripes
ENSLOCG00000002047	cth1	98	47.196	ENSTNIG00000000740	cth1	74	46.729	Tetraodon_nigroviridis
ENSLOCG00000002047	cth1	80	59.236	ENSXCOG00000003710	cth1	65	59.236	Xiphophorus_couchianus
ENSLOCG00000002047	cth1	97	49.296	ENSXMAG00000023885	cth1	67	48.826	Xiphophorus_maculatus