EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002097 (Gene tree)
Gene ID: 102682376
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 11785 bases
Position: chrLG9:829538-841322
Accession: 102682376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002472	efThoc1	PF11957.8	3.2e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002478	-	2226	XM_006633863	ENSLOCP00000002472	656 (aa)	XP_006633926	W5M264

Gene Model

Click here to download ENSLOCG00000002097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002097	thoc1	99	76.380	ENSG00000079134	THOC1	99	82.353	Homo_sapiens
ENSLOCG00000002097	thoc1	99	76.712	ENSAMEG00000006645	THOC1	99	77.356	Ailuropoda_melanoleuca
ENSLOCG00000002097	thoc1	94	82.172	ENSACIG00000019392	thoc1	95	82.496	Amphilophus_citrinellus
ENSLOCG00000002097	thoc1	99	79.116	ENSAOCG00000008391	thoc1	100	79.421	Amphiprion_ocellaris
ENSLOCG00000002097	thoc1	99	83.257	ENSAPEG00000001093	thoc1	100	83.562	Amphiprion_percula
ENSLOCG00000002097	thoc1	99	84.018	ENSATEG00000004783	thoc1	100	84.323	Anabas_testudineus
ENSLOCG00000002097	thoc1	98	77.399	ENSAPLG00000016149	THOC1	98	76.641	Anas_platyrhynchos
ENSLOCG00000002097	thoc1	99	76.865	ENSACAG00000008307	THOC1	97	76.865	Anolis_carolinensis
ENSLOCG00000002097	thoc1	99	75.721	ENSANAG00000033200	THOC1	98	76.364	Aotus_nancymaae
ENSLOCG00000002097	thoc1	99	82.801	ENSACLG00000016836	thoc1	100	83.105	Astatotilapia_calliptera
ENSLOCG00000002097	thoc1	94	77.352	ENSAMXG00000014708	thoc1	97	77.352	Astyanax_mexicanus
ENSLOCG00000002097	thoc1	99	76.994	ENSBTAG00000019215	THOC1	98	77.642	Bos_taurus
ENSLOCG00000002097	thoc1	71	33.333	WBGene00020172	thoc-1	70	33.753	Caenorhabditis_elegans
ENSLOCG00000002097	thoc1	99	76.534	ENSCJAG00000020450	THOC1	98	77.182	Callithrix_jacchus
ENSLOCG00000002097	thoc1	99	76.840	ENSCAFG00000018324	THOC1	98	77.489	Canis_familiaris
ENSLOCG00000002097	thoc1	99	76.840	ENSCAFG00020017894	THOC1	98	77.489	Canis_lupus_dingo
ENSLOCG00000002097	thoc1	99	76.994	ENSCHIG00000015399	THOC1	99	78.438	Capra_hircus
ENSLOCG00000002097	thoc1	99	76.408	ENSTSYG00000010585	THOC1	99	77.052	Carlito_syrichta
ENSLOCG00000002097	thoc1	97	57.500	ENSCAPG00000016270	THOC1	97	58.190	Cavia_aperea
ENSLOCG00000002097	thoc1	99	75.920	ENSCPOG00000000959	THOC1	98	76.570	Cavia_porcellus
ENSLOCG00000002097	thoc1	99	76.534	ENSCCAG00000025766	THOC1	98	77.182	Cebus_capucinus
ENSLOCG00000002097	thoc1	99	73.773	ENSCATG00000028180	THOC1	96	81.534	Cercocebus_atys
ENSLOCG00000002097	thoc1	97	77.044	ENSCLAG00000009117	THOC1	99	77.708	Chinchilla_lanigera
ENSLOCG00000002097	thoc1	99	76.534	ENSCSAG00000017631	THOC1	98	77.182	Chlorocebus_sabaeus
ENSLOCG00000002097	thoc1	78	80.738	ENSCHOG00000010609	THOC1	78	80.328	Choloepus_hoffmanni
ENSLOCG00000002097	thoc1	99	77.829	ENSCPBG00000027558	THOC1	99	77.982	Chrysemys_picta_bellii
ENSLOCG00000002097	thoc1	74	47.791	ENSCING00000007663	-	99	46.988	Ciona_intestinalis
ENSLOCG00000002097	thoc1	94	48.670	ENSCSAVG00000010649	-	100	48.357	Ciona_savignyi
ENSLOCG00000002097	thoc1	99	76.380	ENSCANG00000034265	THOC1	95	82.267	Colobus_angolensis_palliatus
ENSLOCG00000002097	thoc1	99	75.767	ENSCGRG00001016464	Thoc1	98	76.417	Cricetulus_griseus_chok1gshd
ENSLOCG00000002097	thoc1	98	76.516	ENSCGRG00000010269	-	99	77.551	Cricetulus_griseus_crigri
ENSLOCG00000002097	thoc1	90	63.514	ENSCGRG00000003390	-	98	63.514	Cricetulus_griseus_crigri
ENSLOCG00000002097	thoc1	99	80.182	ENSCSEG00000012486	thoc1	99	82.080	Cynoglossus_semilaevis
ENSLOCG00000002097	thoc1	99	81.279	ENSCVAG00000020600	thoc1	100	81.583	Cyprinodon_variegatus
ENSLOCG00000002097	thoc1	99	81.832	ENSDARG00000088246	thoc1	99	81.832	Danio_rerio
ENSLOCG00000002097	thoc1	99	76.534	ENSDNOG00000019217	THOC1	98	77.182	Dasypus_novemcinctus
ENSLOCG00000002097	thoc1	97	72.799	ENSDORG00000008060	Thoc1	98	73.469	Dipodomys_ordii
ENSLOCG00000002097	thoc1	98	36.415	FBgn0037382	Hpr1	95	36.273	Drosophila_melanogaster
ENSLOCG00000002097	thoc1	89	59.762	ENSETEG00000004165	THOC1	98	59.762	Echinops_telfairi
ENSLOCG00000002097	thoc1	92	63.184	ENSEBUG00000005998	thoc1	98	65.066	Eptatretus_burgeri
ENSLOCG00000002097	thoc1	99	76.220	ENSEASG00005002549	THOC1	95	76.865	Equus_asinus_asinus
ENSLOCG00000002097	thoc1	99	76.677	ENSECAG00000009267	THOC1	89	77.321	Equus_caballus
ENSLOCG00000002097	thoc1	79	62.411	ENSEEUG00000012214	-	81	62.411	Erinaceus_europaeus
ENSLOCG00000002097	thoc1	99	84.394	ENSELUG00000023277	thoc1	100	84.394	Esox_lucius
ENSLOCG00000002097	thoc1	99	76.712	ENSFCAG00000022454	THOC1	86	77.356	Felis_catus
ENSLOCG00000002097	thoc1	97	77.103	ENSFALG00000006205	THOC1	99	77.259	Ficedula_albicollis
ENSLOCG00000002097	thoc1	98	76.863	ENSFDAG00000006842	THOC1	99	77.519	Fukomys_damarensis
ENSLOCG00000002097	thoc1	99	82.040	ENSFHEG00000008841	thoc1	100	82.344	Fundulus_heteroclitus
ENSLOCG00000002097	thoc1	99	80.763	ENSGMOG00000011486	thoc1	99	81.069	Gadus_morhua
ENSLOCG00000002097	thoc1	99	76.911	ENSGALG00000014915	THOC1	99	76.133	Gallus_gallus
ENSLOCG00000002097	thoc1	99	80.365	ENSGAFG00000021464	thoc1	100	80.670	Gambusia_affinis
ENSLOCG00000002097	thoc1	99	81.735	ENSGACG00000017361	thoc1	100	82.040	Gasterosteus_aculeatus
ENSLOCG00000002097	thoc1	99	77.744	ENSGAGG00000021230	-	97	77.896	Gopherus_agassizii
ENSLOCG00000002097	thoc1	99	76.408	ENSGGOG00000003013	THOC1	99	77.052	Gorilla_gorilla
ENSLOCG00000002097	thoc1	99	83.105	ENSHBUG00000009096	thoc1	100	83.409	Haplochromis_burtoni
ENSLOCG00000002097	thoc1	99	76.840	ENSHGLG00000003712	-	98	77.335	Heterocephalus_glaber_female
ENSLOCG00000002097	thoc1	68	75.135	ENSHGLG00000009264	-	98	75.135	Heterocephalus_glaber_female
ENSLOCG00000002097	thoc1	76	64.516	ENSHGLG00100002225	-	98	66.845	Heterocephalus_glaber_male
ENSLOCG00000002097	thoc1	99	76.687	ENSHGLG00100003570	THOC1	98	77.182	Heterocephalus_glaber_male
ENSLOCG00000002097	thoc1	98	69.195	ENSIPUG00000005306	thoc1	99	68.576	Ictalurus_punctatus
ENSLOCG00000002097	thoc1	99	76.227	ENSSTOG00000006484	THOC1	98	76.876	Ictidomys_tridecemlineatus
ENSLOCG00000002097	thoc1	52	78.035	ENSJJAG00000014893	-	95	78.035	Jaculus_jaculus
ENSLOCG00000002097	thoc1	99	82.648	ENSKMAG00000003904	thoc1	100	82.953	Kryptolebias_marmoratus
ENSLOCG00000002097	thoc1	99	82.219	ENSLBEG00000020372	thoc1	98	82.523	Labrus_bergylta
ENSLOCG00000002097	thoc1	99	77.335	ENSLACG00000014869	THOC1	99	77.335	Latimeria_chalumnae
ENSLOCG00000002097	thoc1	99	76.534	ENSLAFG00000009585	THOC1	98	77.182	Loxodonta_africana
ENSLOCG00000002097	thoc1	99	76.560	ENSMFAG00000041520	THOC1	99	77.204	Macaca_fascicularis
ENSLOCG00000002097	thoc1	99	76.534	ENSMMUG00000004662	THOC1	98	77.182	Macaca_mulatta
ENSLOCG00000002097	thoc1	99	76.560	ENSMNEG00000040177	THOC1	99	77.204	Macaca_nemestrina
ENSLOCG00000002097	thoc1	99	76.560	ENSMLEG00000034201	THOC1	99	77.204	Mandrillus_leucophaeus
ENSLOCG00000002097	thoc1	95	82.830	ENSMAMG00000016747	thoc1	100	83.148	Mastacembelus_armatus
ENSLOCG00000002097	thoc1	99	82.801	ENSMZEG00005024609	thoc1	100	83.105	Maylandia_zebra
ENSLOCG00000002097	thoc1	97	77.344	ENSMGAG00000009811	THOC1	99	77.500	Meleagris_gallopavo
ENSLOCG00000002097	thoc1	99	75.460	ENSMAUG00000010272	Thoc1	98	76.110	Mesocricetus_auratus
ENSLOCG00000002097	thoc1	99	76.687	ENSMICG00000027200	THOC1	98	77.335	Microcebus_murinus
ENSLOCG00000002097	thoc1	99	65.491	ENSMOCG00000014924	-	95	65.544	Microtus_ochrogaster
ENSLOCG00000002097	thoc1	99	74.693	ENSMOCG00000014536	-	85	75.345	Microtus_ochrogaster
ENSLOCG00000002097	thoc1	93	81.596	ENSMMOG00000011772	thoc1	100	82.439	Mola_mola
ENSLOCG00000002097	thoc1	99	76.515	ENSMODG00000021482	THOC1	98	76.667	Monodelphis_domestica
ENSLOCG00000002097	thoc1	99	82.648	ENSMALG00000021872	thoc1	100	82.953	Monopterus_albus
ENSLOCG00000002097	thoc1	99	75.153	MGP_CAROLIEiJ_G0021989	Thoc1	98	75.804	Mus_caroli
ENSLOCG00000002097	thoc1	99	75.307	ENSMUSG00000024287	Thoc1	98	75.957	Mus_musculus
ENSLOCG00000002097	thoc1	99	75.307	MGP_PahariEiJ_G0018726	Thoc1	98	75.957	Mus_pahari
ENSLOCG00000002097	thoc1	99	75.307	MGP_SPRETEiJ_G0022905	Thoc1	98	75.957	Mus_spretus
ENSLOCG00000002097	thoc1	99	76.687	ENSMPUG00000005448	THOC1	98	77.335	Mustela_putorius_furo
ENSLOCG00000002097	thoc1	99	75.920	ENSMLUG00000004090	-	98	76.570	Myotis_lucifugus
ENSLOCG00000002097	thoc1	61	68.657	ENSMLUG00000024912	-	100	68.657	Myotis_lucifugus
ENSLOCG00000002097	thoc1	90	70.234	ENSMLUG00000027965	-	99	70.234	Myotis_lucifugus
ENSLOCG00000002097	thoc1	98	61.466	ENSNGAG00000008061	-	98	62.150	Nannospalax_galili
ENSLOCG00000002097	thoc1	99	76.534	ENSNGAG00000001401	-	98	77.182	Nannospalax_galili
ENSLOCG00000002097	thoc1	97	82.215	ENSNBRG00000005991	thoc1	97	82.527	Neolamprologus_brichardi
ENSLOCG00000002097	thoc1	99	76.534	ENSNLEG00000006835	THOC1	98	77.182	Nomascus_leucogenys
ENSLOCG00000002097	thoc1	97	67.398	ENSMEUG00000009756	THOC1	99	67.555	Notamacropus_eugenii
ENSLOCG00000002097	thoc1	99	60.890	ENSOPRG00000001108	THOC1	98	61.562	Ochotona_princeps
ENSLOCG00000002097	thoc1	99	71.012	ENSODEG00000006623	THOC1	98	71.669	Octodon_degus
ENSLOCG00000002097	thoc1	100	82.701	ENSONIG00000009440	thoc1	99	83.005	Oreochromis_niloticus
ENSLOCG00000002097	thoc1	99	76.534	ENSOCUG00000011601	THOC1	98	77.182	Oryctolagus_cuniculus
ENSLOCG00000002097	thoc1	99	82.496	ENSORLG00000017629	thoc1	100	82.801	Oryzias_latipes
ENSLOCG00000002097	thoc1	99	82.344	ENSORLG00020007567	thoc1	100	82.648	Oryzias_latipes_hni
ENSLOCG00000002097	thoc1	99	82.496	ENSORLG00015007356	thoc1	100	82.801	Oryzias_latipes_hsok
ENSLOCG00000002097	thoc1	99	80.822	ENSOMEG00000008200	thoc1	100	81.126	Oryzias_melastigma
ENSLOCG00000002097	thoc1	99	73.364	ENSOGAG00000000470	THOC1	99	74.012	Otolemur_garnettii
ENSLOCG00000002097	thoc1	98	77.605	ENSOARG00000009238	THOC1	97	78.261	Ovis_aries
ENSLOCG00000002097	thoc1	99	76.560	ENSPPAG00000031812	THOC1	99	77.204	Pan_paniscus
ENSLOCG00000002097	thoc1	99	76.074	ENSPPRG00000023794	THOC1	96	81.375	Panthera_pardus
ENSLOCG00000002097	thoc1	99	76.074	ENSPTIG00000007469	THOC1	96	81.375	Panthera_tigris_altaica
ENSLOCG00000002097	thoc1	99	75.569	ENSPTRG00000009816	THOC1	98	76.212	Pan_troglodytes
ENSLOCG00000002097	thoc1	99	75.610	ENSPANG00000008665	THOC1	98	76.256	Papio_anubis
ENSLOCG00000002097	thoc1	99	84.650	ENSPKIG00000005906	thoc1	100	85.562	Paramormyrops_kingsleyae
ENSLOCG00000002097	thoc1	80	80.529	ENSPSIG00000007691	THOC1	97	80.718	Pelodiscus_sinensis
ENSLOCG00000002097	thoc1	94	80.257	ENSPMGG00000008279	thoc1	95	80.578	Periophthalmus_magnuspinnatus
ENSLOCG00000002097	thoc1	99	75.460	ENSPEMG00000021789	Thoc1	98	76.110	Peromyscus_maniculatus_bairdii
ENSLOCG00000002097	thoc1	73	77.984	ENSPCIG00000026942	THOC1	97	78.189	Phascolarctos_cinereus
ENSLOCG00000002097	thoc1	99	80.822	ENSPFOG00000011673	thoc1	100	81.126	Poecilia_formosa
ENSLOCG00000002097	thoc1	99	80.974	ENSPLAG00000019648	thoc1	100	81.279	Poecilia_latipinna
ENSLOCG00000002097	thoc1	99	80.974	ENSPMEG00000007083	thoc1	100	81.279	Poecilia_mexicana
ENSLOCG00000002097	thoc1	99	80.822	ENSPREG00000006719	thoc1	100	81.126	Poecilia_reticulata
ENSLOCG00000002097	thoc1	75	78.937	ENSPPYG00000009049	-	98	78.937	Pongo_abelii
ENSLOCG00000002097	thoc1	99	68.405	ENSPCAG00000005320	THOC1	98	68.405	Procavia_capensis
ENSLOCG00000002097	thoc1	99	75.920	ENSPCOG00000009234	THOC1	98	76.570	Propithecus_coquereli
ENSLOCG00000002097	thoc1	99	75.460	ENSPVAG00000004007	THOC1	98	76.110	Pteropus_vampyrus
ENSLOCG00000002097	thoc1	99	83.105	ENSPNYG00000019152	thoc1	100	83.409	Pundamilia_nyererei
ENSLOCG00000002097	thoc1	99	81.707	ENSPNAG00000023390	thoc1	100	81.707	Pygocentrus_nattereri
ENSLOCG00000002097	thoc1	80	62.651	ENSRNOG00000015332	Thoc1	94	64.400	Rattus_norvegicus
ENSLOCG00000002097	thoc1	99	75.721	ENSRBIG00000033738	THOC1	99	79.239	Rhinopithecus_bieti
ENSLOCG00000002097	thoc1	99	76.534	ENSRROG00000044988	THOC1	95	82.267	Rhinopithecus_roxellana
ENSLOCG00000002097	thoc1	99	76.256	ENSSBOG00000016556	THOC1	99	76.900	Saimiri_boliviensis_boliviensis
ENSLOCG00000002097	thoc1	99	77.642	ENSSHAG00000014829	THOC1	98	77.795	Sarcophilus_harrisii
ENSLOCG00000002097	thoc1	99	87.671	ENSSFOG00015021527	thoc1	100	87.671	Scleropages_formosus
ENSLOCG00000002097	thoc1	99	81.155	ENSSMAG00000018465	thoc1	100	81.459	Scophthalmus_maximus
ENSLOCG00000002097	thoc1	99	84.018	ENSSDUG00000016810	thoc1	100	84.323	Seriola_dumerili
ENSLOCG00000002097	thoc1	99	84.018	ENSSLDG00000015555	thoc1	100	84.323	Seriola_lalandi_dorsalis
ENSLOCG00000002097	thoc1	87	75.573	ENSSARG00000006910	THOC1	86	75.573	Sorex_araneus
ENSLOCG00000002097	thoc1	98	76.553	ENSSPUG00000007238	THOC1	98	76.190	Sphenodon_punctatus
ENSLOCG00000002097	thoc1	99	79.154	ENSSPAG00000018847	thoc1	100	79.456	Stegastes_partitus
ENSLOCG00000002097	thoc1	99	76.712	ENSSSCG00000025653	THOC1	93	77.356	Sus_scrofa
ENSLOCG00000002097	thoc1	99	76.606	ENSTGUG00000010204	THOC1	99	77.064	Taeniopygia_guttata
ENSLOCG00000002097	thoc1	99	80.488	ENSTRUG00000013518	thoc1	99	80.793	Takifugu_rubripes
ENSLOCG00000002097	thoc1	99	80.822	ENSTNIG00000008473	thoc1	99	81.126	Tetraodon_nigroviridis
ENSLOCG00000002097	thoc1	99	68.865	ENSTBEG00000016920	THOC1	98	69.525	Tupaia_belangeri
ENSLOCG00000002097	thoc1	99	70.552	ENSTTRG00000016664	THOC1	98	71.210	Tursiops_truncatus
ENSLOCG00000002097	thoc1	99	76.840	ENSUAMG00000002527	THOC1	98	77.969	Ursus_americanus
ENSLOCG00000002097	thoc1	99	76.840	ENSUMAG00000019693	THOC1	98	77.489	Ursus_maritimus
ENSLOCG00000002097	thoc1	66	72.539	ENSVPAG00000003726	-	66	74.742	Vicugna_pacos
ENSLOCG00000002097	thoc1	99	76.840	ENSVVUG00000004384	THOC1	98	77.489	Vulpes_vulpes
ENSLOCG00000002097	thoc1	99	73.900	ENSXETG00000003155	thoc1	97	74.203	Xenopus_tropicalis
ENSLOCG00000002097	thoc1	94	77.597	ENSXCOG00000016085	thoc1	89	77.922	Xiphophorus_couchianus
ENSLOCG00000002097	thoc1	99	80.518	ENSXMAG00000002353	thoc1	100	80.822	Xiphophorus_maculatus