EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002191 (Gene tree)
Gene ID: 102688665
Gene Symbol: tsn
Alias: id:ibd2900|wu:fb38b07|wu:fi31h02|zgc:123170
Full Name: translin
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6383 bases
Position: chrLG12:4028464-4034846
Accession: 102688665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002552	Translin	PF01997.16	1.1e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002558	-	2890	XM_006636246	ENSLOCP00000002552	230 (aa)	XP_006636309	W5M2E4

Gene Model

Click here to download ENSLOCG00000002191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002191's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002191	tsn	97	79.464	ENSG00000211460	TSN	98	79.464	Homo_sapiens
ENSLOCG00000002191	tsn	99	87.336	ENSAPOG00000002063	tsn	100	87.336	Acanthochromis_polyacanthus
ENSLOCG00000002191	tsn	98	78.761	ENSAMEG00000005055	TSN	99	78.761	Ailuropoda_melanoleuca
ENSLOCG00000002191	tsn	97	87.946	ENSACIG00000021694	tsn	99	87.946	Amphilophus_citrinellus
ENSLOCG00000002191	tsn	99	87.336	ENSAOCG00000015574	tsn	100	87.440	Amphiprion_ocellaris
ENSLOCG00000002191	tsn	99	87.336	ENSAPEG00000001677	tsn	100	87.336	Amphiprion_percula
ENSLOCG00000002191	tsn	98	86.667	ENSATEG00000004115	tsn	99	86.667	Anabas_testudineus
ENSLOCG00000002191	tsn	93	80.822	ENSACAG00000004757	TSN	99	80.822	Anolis_carolinensis
ENSLOCG00000002191	tsn	97	79.464	ENSANAG00000026842	TSN	98	79.464	Aotus_nancymaae
ENSLOCG00000002191	tsn	97	87.500	ENSACLG00000020831	tsn	99	87.500	Astatotilapia_calliptera
ENSLOCG00000002191	tsn	99	84.716	ENSAMXG00000035417	tsn	100	84.716	Astyanax_mexicanus
ENSLOCG00000002191	tsn	97	79.464	ENSBTAG00000006059	TSN	98	79.464	Bos_taurus
ENSLOCG00000002191	tsn	97	79.464	ENSCJAG00000047222	-	98	79.464	Callithrix_jacchus
ENSLOCG00000002191	tsn	97	79.464	ENSCJAG00000044533	-	97	81.818	Callithrix_jacchus
ENSLOCG00000002191	tsn	98	78.761	ENSCAFG00000004700	TSN	93	78.761	Canis_familiaris
ENSLOCG00000002191	tsn	98	78.761	ENSCAFG00020011747	TSN	99	78.761	Canis_lupus_dingo
ENSLOCG00000002191	tsn	97	79.464	ENSCHIG00000010715	TSN	98	79.464	Capra_hircus
ENSLOCG00000002191	tsn	98	79.111	ENSTSYG00000004395	TSN	99	79.111	Carlito_syrichta
ENSLOCG00000002191	tsn	95	62.613	ENSCAPG00000015595	TSN	89	62.613	Cavia_aperea
ENSLOCG00000002191	tsn	97	79.464	ENSCPOG00000035645	TSN	98	79.464	Cavia_porcellus
ENSLOCG00000002191	tsn	98	78.667	ENSCCAG00000026371	TSN	99	78.667	Cebus_capucinus
ENSLOCG00000002191	tsn	66	67.763	ENSCCAG00000034886	-	84	67.763	Cebus_capucinus
ENSLOCG00000002191	tsn	97	79.464	ENSCATG00000032155	TSN	98	79.464	Cercocebus_atys
ENSLOCG00000002191	tsn	97	79.464	ENSCLAG00000006171	TSN	98	79.464	Chinchilla_lanigera
ENSLOCG00000002191	tsn	97	79.464	ENSCSAG00000016712	TSN	98	79.464	Chlorocebus_sabaeus
ENSLOCG00000002191	tsn	96	70.455	ENSCPBG00000018116	-	96	70.455	Chrysemys_picta_bellii
ENSLOCG00000002191	tsn	66	77.483	ENSCPBG00000013741	-	80	77.483	Chrysemys_picta_bellii
ENSLOCG00000002191	tsn	94	47.706	ENSCING00000012612	-	100	47.706	Ciona_intestinalis
ENSLOCG00000002191	tsn	97	46.637	ENSCSAVG00000009485	-	99	46.637	Ciona_savignyi
ENSLOCG00000002191	tsn	97	79.464	ENSCANG00000041881	TSN	98	79.464	Colobus_angolensis_palliatus
ENSLOCG00000002191	tsn	97	79.464	ENSCGRG00001018233	Tsn	98	79.464	Cricetulus_griseus_chok1gshd
ENSLOCG00000002191	tsn	97	79.464	ENSCGRG00000008331	Tsn	98	79.464	Cricetulus_griseus_crigri
ENSLOCG00000002191	tsn	98	82.301	ENSCSEG00000005825	tsn	99	82.301	Cynoglossus_semilaevis
ENSLOCG00000002191	tsn	98	76.106	ENSCVAG00000022024	tsn	100	76.652	Cyprinodon_variegatus
ENSLOCG00000002191	tsn	97	88.839	ENSDARG00000041830	tsn	99	88.839	Danio_rerio
ENSLOCG00000002191	tsn	97	79.464	ENSDNOG00000025740	TSN	98	79.464	Dasypus_novemcinctus
ENSLOCG00000002191	tsn	98	78.761	ENSDORG00000026251	-	99	78.761	Dipodomys_ordii
ENSLOCG00000002191	tsn	95	55.046	FBgn0033528	trsn	92	55.046	Drosophila_melanogaster
ENSLOCG00000002191	tsn	97	79.464	ENSEASG00005004774	TSN	98	79.464	Equus_asinus_asinus
ENSLOCG00000002191	tsn	97	79.464	ENSECAG00000015930	TSN	98	79.464	Equus_caballus
ENSLOCG00000002191	tsn	74	82.941	ENSEEUG00000013935	TSN	98	82.941	Erinaceus_europaeus
ENSLOCG00000002191	tsn	97	87.444	ENSELUG00000007669	tsn	98	87.444	Esox_lucius
ENSLOCG00000002191	tsn	98	78.761	ENSFCAG00000027149	TSN	99	78.761	Felis_catus
ENSLOCG00000002191	tsn	72	61.446	ENSFCAG00000022306	-	94	61.446	Felis_catus
ENSLOCG00000002191	tsn	91	79.904	ENSFALG00000013247	TSN	91	79.904	Ficedula_albicollis
ENSLOCG00000002191	tsn	97	79.464	ENSFDAG00000012302	TSN	98	79.464	Fukomys_damarensis
ENSLOCG00000002191	tsn	99	87.336	ENSFHEG00000015531	tsn	100	87.336	Fundulus_heteroclitus
ENSLOCG00000002191	tsn	98	81.778	ENSGMOG00000009247	tsn	99	81.778	Gadus_morhua
ENSLOCG00000002191	tsn	99	79.039	ENSGALG00000011652	TSN	100	79.039	Gallus_gallus
ENSLOCG00000002191	tsn	99	86.463	ENSGAFG00000003816	tsn	100	86.463	Gambusia_affinis
ENSLOCG00000002191	tsn	96	88.182	ENSGACG00000000235	tsn	96	88.182	Gasterosteus_aculeatus
ENSLOCG00000002191	tsn	97	79.464	ENSGGOG00000002216	TSN	97	81.773	Gorilla_gorilla
ENSLOCG00000002191	tsn	98	87.111	ENSHBUG00000002340	tsn	84	87.111	Haplochromis_burtoni
ENSLOCG00000002191	tsn	97	79.464	ENSHGLG00000007038	TSN	98	79.464	Heterocephalus_glaber_female
ENSLOCG00000002191	tsn	97	79.464	ENSHGLG00100000069	TSN	98	79.464	Heterocephalus_glaber_male
ENSLOCG00000002191	tsn	97	85.202	ENSHCOG00000001756	tsn	99	85.202	Hippocampus_comes
ENSLOCG00000002191	tsn	99	87.336	ENSIPUG00000021370	tsn	100	87.336	Ictalurus_punctatus
ENSLOCG00000002191	tsn	97	79.464	ENSSTOG00000000972	TSN	98	79.464	Ictidomys_tridecemlineatus
ENSLOCG00000002191	tsn	97	79.464	ENSJJAG00000006730	Tsn	98	79.464	Jaculus_jaculus
ENSLOCG00000002191	tsn	99	87.336	ENSKMAG00000004996	tsn	100	87.336	Kryptolebias_marmoratus
ENSLOCG00000002191	tsn	97	88.839	ENSLBEG00000012620	tsn	99	88.839	Labrus_bergylta
ENSLOCG00000002191	tsn	97	63.877	ENSLACG00000005246	TSN	99	63.877	Latimeria_chalumnae
ENSLOCG00000002191	tsn	97	73.568	ENSLAFG00000032428	TSN	98	73.568	Loxodonta_africana
ENSLOCG00000002191	tsn	97	79.464	ENSMFAG00000044217	TSN	98	79.464	Macaca_fascicularis
ENSLOCG00000002191	tsn	97	79.464	ENSMMUG00000021119	TSN	98	79.464	Macaca_mulatta
ENSLOCG00000002191	tsn	97	79.464	ENSMNEG00000040632	TSN	98	79.464	Macaca_nemestrina
ENSLOCG00000002191	tsn	54	75.000	ENSMLEG00000038656	TSN	96	75.000	Mandrillus_leucophaeus
ENSLOCG00000002191	tsn	99	86.026	ENSMAMG00000019536	tsn	100	86.026	Mastacembelus_armatus
ENSLOCG00000002191	tsn	98	87.556	ENSMZEG00005018715	tsn	84	87.556	Maylandia_zebra
ENSLOCG00000002191	tsn	77	81.356	ENSMGAG00000011956	TSN	90	81.356	Meleagris_gallopavo
ENSLOCG00000002191	tsn	90	80.193	ENSMAUG00000018800	Tsn	99	81.773	Mesocricetus_auratus
ENSLOCG00000002191	tsn	97	79.464	ENSMICG00000015793	TSN	98	79.464	Microcebus_murinus
ENSLOCG00000002191	tsn	98	79.111	ENSMOCG00000013248	Tsn	99	79.111	Microtus_ochrogaster
ENSLOCG00000002191	tsn	90	84.541	ENSMMOG00000019661	tsn	100	84.541	Mola_mola
ENSLOCG00000002191	tsn	96	78.733	ENSMODG00000000147	TSN	99	77.093	Monodelphis_domestica
ENSLOCG00000002191	tsn	99	86.900	ENSMALG00000001827	tsn	100	86.900	Monopterus_albus
ENSLOCG00000002191	tsn	97	79.464	ENSMUSG00000026374	Tsn	98	79.464	Mus_musculus
ENSLOCG00000002191	tsn	97	79.464	MGP_PahariEiJ_G0027742	Tsn	98	79.464	Mus_pahari
ENSLOCG00000002191	tsn	97	79.464	MGP_SPRETEiJ_G0015313	Tsn	98	79.464	Mus_spretus
ENSLOCG00000002191	tsn	98	78.761	ENSMPUG00000001056	TSN	99	78.761	Mustela_putorius_furo
ENSLOCG00000002191	tsn	88	82.178	ENSMLUG00000012656	TSN	98	82.178	Myotis_lucifugus
ENSLOCG00000002191	tsn	97	79.464	ENSNGAG00000010353	Tsn	98	79.464	Nannospalax_galili
ENSLOCG00000002191	tsn	97	87.054	ENSNBRG00000001193	tsn	99	87.054	Neolamprologus_brichardi
ENSLOCG00000002191	tsn	97	79.464	ENSNLEG00000032773	TSN	98	79.464	Nomascus_leucogenys
ENSLOCG00000002191	tsn	98	58.407	ENSMEUG00000006228	TSN	99	58.407	Notamacropus_eugenii
ENSLOCG00000002191	tsn	60	66.187	ENSOPRG00000004858	-	99	66.187	Ochotona_princeps
ENSLOCG00000002191	tsn	97	79.464	ENSODEG00000008386	-	98	79.464	Octodon_degus
ENSLOCG00000002191	tsn	98	62.222	ENSODEG00000005998	-	98	62.222	Octodon_degus
ENSLOCG00000002191	tsn	99	86.463	ENSONIG00000017060	tsn	100	86.463	Oreochromis_niloticus
ENSLOCG00000002191	tsn	87	82.412	ENSOANG00000003457	TSN	99	80.488	Ornithorhynchus_anatinus
ENSLOCG00000002191	tsn	98	79.556	ENSOCUG00000023529	TSN	99	79.556	Oryctolagus_cuniculus
ENSLOCG00000002191	tsn	99	86.463	ENSORLG00000010049	tsn	100	86.463	Oryzias_latipes
ENSLOCG00000002191	tsn	63	83.562	ENSORLG00020017000	-	85	83.562	Oryzias_latipes_hni
ENSLOCG00000002191	tsn	97	87.500	ENSORLG00020016476	tsn	99	87.500	Oryzias_latipes_hni
ENSLOCG00000002191	tsn	99	86.900	ENSORLG00015019192	tsn	100	86.900	Oryzias_latipes_hsok
ENSLOCG00000002191	tsn	99	87.336	ENSOMEG00000016335	tsn	100	87.336	Oryzias_melastigma
ENSLOCG00000002191	tsn	97	79.464	ENSOGAG00000030436	TSN	98	79.464	Otolemur_garnettii
ENSLOCG00000002191	tsn	97	79.464	ENSOARG00000013339	TSN	98	79.464	Ovis_aries
ENSLOCG00000002191	tsn	97	79.464	ENSPPAG00000032878	TSN	98	79.464	Pan_paniscus
ENSLOCG00000002191	tsn	81	59.893	ENSPPRG00000004174	-	79	59.893	Panthera_pardus
ENSLOCG00000002191	tsn	98	78.761	ENSPPRG00000006531	TSN	99	78.761	Panthera_pardus
ENSLOCG00000002191	tsn	55	72.222	ENSPTIG00000012953	TSN	88	70.229	Panthera_tigris_altaica
ENSLOCG00000002191	tsn	97	79.464	ENSPTRG00000012420	TSN	98	79.464	Pan_troglodytes
ENSLOCG00000002191	tsn	97	79.464	ENSPANG00000000733	TSN	98	79.464	Papio_anubis
ENSLOCG00000002191	tsn	98	88.444	ENSPKIG00000002005	tsn	99	88.444	Paramormyrops_kingsleyae
ENSLOCG00000002191	tsn	74	85.965	ENSPSIG00000006064	TSN	93	85.965	Pelodiscus_sinensis
ENSLOCG00000002191	tsn	97	88.739	ENSPMGG00000015287	tsn	98	88.739	Periophthalmus_magnuspinnatus
ENSLOCG00000002191	tsn	97	66.216	ENSPMAG00000009161	tsn	96	66.216	Petromyzon_marinus
ENSLOCG00000002191	tsn	89	82.439	ENSPCIG00000023491	TSN	99	82.353	Phascolarctos_cinereus
ENSLOCG00000002191	tsn	99	86.900	ENSPFOG00000016063	tsn	100	86.900	Poecilia_formosa
ENSLOCG00000002191	tsn	99	86.900	ENSPLAG00000010654	tsn	100	86.900	Poecilia_latipinna
ENSLOCG00000002191	tsn	99	86.900	ENSPMEG00000023570	tsn	100	86.900	Poecilia_mexicana
ENSLOCG00000002191	tsn	99	86.900	ENSPREG00000003481	tsn	100	86.900	Poecilia_reticulata
ENSLOCG00000002191	tsn	97	79.464	ENSPPYG00000012774	TSN	98	79.464	Pongo_abelii
ENSLOCG00000002191	tsn	74	82.353	ENSPCAG00000003549	TSN	98	82.353	Procavia_capensis
ENSLOCG00000002191	tsn	97	79.464	ENSPCOG00000011045	TSN	98	79.464	Propithecus_coquereli
ENSLOCG00000002191	tsn	97	79.464	ENSPVAG00000016702	TSN	98	79.464	Pteropus_vampyrus
ENSLOCG00000002191	tsn	98	87.556	ENSPNYG00000012396	tsn	84	87.556	Pundamilia_nyererei
ENSLOCG00000002191	tsn	99	88.210	ENSPNAG00000018140	tsn	100	88.210	Pygocentrus_nattereri
ENSLOCG00000002191	tsn	97	79.464	ENSRNOG00000002319	Tsn	98	79.464	Rattus_norvegicus
ENSLOCG00000002191	tsn	97	79.464	ENSRBIG00000041316	TSN	98	79.464	Rhinopithecus_bieti
ENSLOCG00000002191	tsn	97	79.464	ENSRROG00000029954	TSN	98	79.464	Rhinopithecus_roxellana
ENSLOCG00000002191	tsn	83	62.632	ENSSBOG00000015719	-	98	62.778	Saimiri_boliviensis_boliviensis
ENSLOCG00000002191	tsn	97	79.464	ENSSBOG00000028579	TSN	98	79.464	Saimiri_boliviensis_boliviensis
ENSLOCG00000002191	tsn	98	79.204	ENSSHAG00000011707	TSN	99	79.204	Sarcophilus_harrisii
ENSLOCG00000002191	tsn	97	87.892	ENSSFOG00015020668	tsn	98	87.892	Scleropages_formosus
ENSLOCG00000002191	tsn	99	85.153	ENSSMAG00000005822	tsn	100	85.153	Scophthalmus_maximus
ENSLOCG00000002191	tsn	99	86.900	ENSSDUG00000011388	tsn	100	86.900	Seriola_dumerili
ENSLOCG00000002191	tsn	99	86.900	ENSSLDG00000008206	tsn	100	86.900	Seriola_lalandi_dorsalis
ENSLOCG00000002191	tsn	97	53.125	ENSSARG00000007193	-	98	53.125	Sorex_araneus
ENSLOCG00000002191	tsn	99	79.476	ENSSPUG00000017518	TSN	100	79.476	Sphenodon_punctatus
ENSLOCG00000002191	tsn	99	87.773	ENSSPAG00000009283	tsn	100	87.773	Stegastes_partitus
ENSLOCG00000002191	tsn	98	78.761	ENSSSCG00000015729	TSN	99	81.373	Sus_scrofa
ENSLOCG00000002191	tsn	99	78.603	ENSTGUG00000004445	TSN	100	78.603	Taeniopygia_guttata
ENSLOCG00000002191	tsn	98	84.889	ENSTRUG00000013691	tsn	100	84.889	Takifugu_rubripes
ENSLOCG00000002191	tsn	98	84.000	ENSTNIG00000015707	tsn	99	84.000	Tetraodon_nigroviridis
ENSLOCG00000002191	tsn	97	79.464	ENSTBEG00000015319	TSN	98	79.464	Tupaia_belangeri
ENSLOCG00000002191	tsn	97	79.464	ENSTTRG00000005854	TSN	98	79.464	Tursiops_truncatus
ENSLOCG00000002191	tsn	98	78.761	ENSUAMG00000021618	TSN	99	78.761	Ursus_americanus
ENSLOCG00000002191	tsn	97	78.125	ENSUMAG00000008516	TSN	98	78.125	Ursus_maritimus
ENSLOCG00000002191	tsn	56	61.240	ENSVPAG00000009874	-	100	61.240	Vicugna_pacos
ENSLOCG00000002191	tsn	93	78.037	ENSVVUG00000027555	TSN	98	81.373	Vulpes_vulpes
ENSLOCG00000002191	tsn	99	75.330	ENSXETG00000000838	tsn	99	75.330	Xenopus_tropicalis
ENSLOCG00000002191	tsn	54	86.290	ENSXCOG00000018514	tsn	95	86.290	Xiphophorus_couchianus
ENSLOCG00000002191	tsn	99	86.900	ENSXMAG00000022538	tsn	100	86.900	Xiphophorus_maculatus