EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002246 (Gene tree)
Gene ID: -
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: scratch family zinc finger 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 8161 bases
Position: chrLG18:3729071-3737231
Accession: ZDB-GENE-030131-4097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002617	zf-C2H2	PF00096.26	2.8e-23	1	3
ENSLOCP00000002617	zf-C2H2	PF00096.26	2.8e-23	2	3
ENSLOCP00000002617	zf-C2H2	PF00096.26	2.8e-23	3	3
ENSLOCP00000002617	zf-met	PF12874.7	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002623	-	1220	-	ENSLOCP00000002617	318 (aa)	-	W5M2K9

Gene Model

Click here to download ENSLOCG00000002246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002246	scrt2	61	44.872	ENSLOCG00000003678	znf319b	66	44.872
ENSLOCG00000002246	scrt2	97	55.016	ENSLOCG00000007573	scrt1b	97	55.016
ENSLOCG00000002246	scrt2	54	37.594	ENSLOCG00000009778	prdm5	63	37.594
ENSLOCG00000002246	scrt2	58	37.838	ENSLOCG00000017864	-	96	37.838
ENSLOCG00000002246	scrt2	58	46.753	ENSLOCG00000000714	-	90	46.753
ENSLOCG00000002246	scrt2	92	45.333	ENSLOCG00000003926	znf236	50	45.946
ENSLOCG00000002246	scrt2	61	44.872	ENSLOCG00000000544	znf319b	66	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002246	scrt2	97	54.693	ENSAPOG00000009279	scrt1b	96	54.693	Acanthochromis_polyacanthus
ENSLOCG00000002246	scrt2	100	65.644	ENSAPOG00000003680	scrt2	100	66.049	Acanthochromis_polyacanthus
ENSLOCG00000002246	scrt2	97	54.403	ENSAPOG00000015197	-	97	55.484	Acanthochromis_polyacanthus
ENSLOCG00000002246	scrt2	97	54.128	ENSACIG00000006586	-	97	53.704	Amphilophus_citrinellus
ENSLOCG00000002246	scrt2	100	55.728	ENSACIG00000001296	-	100	55.418	Amphilophus_citrinellus
ENSLOCG00000002246	scrt2	100	63.323	ENSACIG00000012604	scrt2	100	63.009	Amphilophus_citrinellus
ENSLOCG00000002246	scrt2	97	54.870	ENSACIG00000013613	scrt1b	96	54.870	Amphilophus_citrinellus
ENSLOCG00000002246	scrt2	100	65.644	ENSAOCG00000021557	scrt2	100	66.049	Amphiprion_ocellaris
ENSLOCG00000002246	scrt2	97	52.905	ENSAOCG00000023304	-	97	52.941	Amphiprion_ocellaris
ENSLOCG00000002246	scrt2	97	54.693	ENSAOCG00000003910	scrt1b	96	54.693	Amphiprion_ocellaris
ENSLOCG00000002246	scrt2	100	65.644	ENSAPEG00000022558	scrt2	100	66.049	Amphiprion_percula
ENSLOCG00000002246	scrt2	97	52.905	ENSAPEG00000005677	-	97	52.941	Amphiprion_percula
ENSLOCG00000002246	scrt2	97	54.693	ENSAPEG00000000869	scrt1b	96	54.693	Amphiprion_percula
ENSLOCG00000002246	scrt2	97	55.016	ENSATEG00000011660	-	97	55.340	Anabas_testudineus
ENSLOCG00000002246	scrt2	100	65.337	ENSATEG00000023998	scrt2	100	65.031	Anabas_testudineus
ENSLOCG00000002246	scrt2	100	56.402	ENSATEG00000003195	-	100	56.402	Anabas_testudineus
ENSLOCG00000002246	scrt2	97	55.340	ENSATEG00000002302	scrt1b	96	55.340	Anabas_testudineus
ENSLOCG00000002246	scrt2	97	54.348	ENSACLG00000012046	-	97	52.744	Astatotilapia_calliptera
ENSLOCG00000002246	scrt2	97	55.663	ENSACLG00000007162	scrt1b	96	55.663	Astatotilapia_calliptera
ENSLOCG00000002246	scrt2	84	61.338	ENSAMXG00000034158	scrt2	92	61.338	Astyanax_mexicanus
ENSLOCG00000002246	scrt2	97	55.305	ENSAMXG00000038085	scrt1a	97	55.627	Astyanax_mexicanus
ENSLOCG00000002246	scrt2	97	55.949	ENSAMXG00000042624	SCRT1	98	55.949	Astyanax_mexicanus
ENSLOCG00000002246	scrt2	97	54.341	ENSCPBG00000018899	SCRT1	97	54.341	Chrysemys_picta_bellii
ENSLOCG00000002246	scrt2	88	51.943	ENSCPBG00000027613	SCRT2	100	51.943	Chrysemys_picta_bellii
ENSLOCG00000002246	scrt2	97	53.211	ENSCSEG00000014892	-	97	52.941	Cynoglossus_semilaevis
ENSLOCG00000002246	scrt2	100	63.190	ENSCSEG00000021542	scrt2	100	63.580	Cynoglossus_semilaevis
ENSLOCG00000002246	scrt2	97	54.045	ENSCSEG00000008596	scrt1b	96	55.627	Cynoglossus_semilaevis
ENSLOCG00000002246	scrt2	97	54.375	ENSCVAG00000003190	-	97	52.941	Cyprinodon_variegatus
ENSLOCG00000002246	scrt2	97	55.128	ENSCVAG00000009561	scrt1b	96	55.016	Cyprinodon_variegatus
ENSLOCG00000002246	scrt2	100	65.217	ENSCVAG00000021038	scrt2	100	65.337	Cyprinodon_variegatus
ENSLOCG00000002246	scrt2	97	55.663	ENSDARG00000040214	scrt1b	97	55.663	Danio_rerio
ENSLOCG00000002246	scrt2	97	54.369	ENSDARG00000100821	scrt1a	97	54.369	Danio_rerio
ENSLOCG00000002246	scrt2	97	55.016	ENSELUG00000005435	scrt1b	96	55.016	Esox_lucius
ENSLOCG00000002246	scrt2	100	61.702	ENSELUG00000023883	scrt2	100	61.934	Esox_lucius
ENSLOCG00000002246	scrt2	97	55.806	ENSELUG00000022228	scrt1a	96	55.161	Esox_lucius
ENSLOCG00000002246	scrt2	100	63.125	ENSFHEG00000005732	scrt2	100	62.813	Fundulus_heteroclitus
ENSLOCG00000002246	scrt2	97	55.449	ENSFHEG00000014820	scrt1b	96	55.340	Fundulus_heteroclitus
ENSLOCG00000002246	scrt2	97	53.211	ENSFHEG00000009794	-	97	52.761	Fundulus_heteroclitus
ENSLOCG00000002246	scrt2	97	52.922	ENSGMOG00000000629	scrt1b	96	52.922	Gadus_morhua
ENSLOCG00000002246	scrt2	100	58.716	ENSGMOG00000019519	scrt2	98	58.716	Gadus_morhua
ENSLOCG00000002246	scrt2	97	52.903	ENSGALG00000028912	SCRT2	97	53.548	Gallus_gallus
ENSLOCG00000002246	scrt2	100	60.248	ENSGAFG00000003093	scrt2	100	60.429	Gambusia_affinis
ENSLOCG00000002246	scrt2	97	55.128	ENSGAFG00000007636	scrt1b	96	55.016	Gambusia_affinis
ENSLOCG00000002246	scrt2	97	54.194	ENSGAFG00000009650	-	97	54.194	Gambusia_affinis
ENSLOCG00000002246	scrt2	97	52.484	ENSGACG00000004072	-	97	52.795	Gasterosteus_aculeatus
ENSLOCG00000002246	scrt2	97	52.443	ENSGACG00000008982	scrt1b	96	52.443	Gasterosteus_aculeatus
ENSLOCG00000002246	scrt2	98	54.341	ENSGAGG00000011736	SCRT1	99	54.341	Gopherus_agassizii
ENSLOCG00000002246	scrt2	97	54.259	ENSGAGG00000020761	SCRT2	100	53.846	Gopherus_agassizii
ENSLOCG00000002246	scrt2	97	55.663	ENSHBUG00000016621	scrt1b	96	55.663	Haplochromis_burtoni
ENSLOCG00000002246	scrt2	100	65.839	ENSHBUG00000012492	scrt2	100	65.432	Haplochromis_burtoni
ENSLOCG00000002246	scrt2	97	53.517	ENSHBUG00000019101	-	97	53.086	Haplochromis_burtoni
ENSLOCG00000002246	scrt2	97	53.722	ENSHCOG00000016704	scrt1b	96	53.722	Hippocampus_comes
ENSLOCG00000002246	scrt2	100	59.692	ENSHCOG00000008116	scrt2	100	59.692	Hippocampus_comes
ENSLOCG00000002246	scrt2	97	51.852	ENSHCOG00000016179	-	97	54.194	Hippocampus_comes
ENSLOCG00000002246	scrt2	97	55.627	ENSIPUG00000004551	scrt1a	97	55.627	Ictalurus_punctatus
ENSLOCG00000002246	scrt2	97	53.035	ENSIPUG00000005547	-	98	53.074	Ictalurus_punctatus
ENSLOCG00000002246	scrt2	100	65.741	ENSKMAG00000018087	scrt2	100	65.432	Kryptolebias_marmoratus
ENSLOCG00000002246	scrt2	97	55.449	ENSKMAG00000005484	scrt1b	96	55.340	Kryptolebias_marmoratus
ENSLOCG00000002246	scrt2	97	53.870	ENSKMAG00000009489	-	97	54.037	Kryptolebias_marmoratus
ENSLOCG00000002246	scrt2	97	52.188	ENSLBEG00000023388	-	53	85.987	Labrus_bergylta
ENSLOCG00000002246	scrt2	100	66.254	ENSLBEG00000015419	scrt2	100	66.154	Labrus_bergylta
ENSLOCG00000002246	scrt2	97	54.045	ENSLACG00000003588	SCRT1	96	54.045	Latimeria_chalumnae
ENSLOCG00000002246	scrt2	100	65.749	ENSMAMG00000001291	scrt2	100	66.154	Mastacembelus_armatus
ENSLOCG00000002246	scrt2	97	54.693	ENSMAMG00000011698	scrt1b	96	54.693	Mastacembelus_armatus
ENSLOCG00000002246	scrt2	97	55.663	ENSMZEG00005005627	scrt1b	96	55.663	Maylandia_zebra
ENSLOCG00000002246	scrt2	97	53.517	ENSMZEG00005026702	-	97	53.086	Maylandia_zebra
ENSLOCG00000002246	scrt2	100	65.839	ENSMZEG00005026445	scrt2	100	65.432	Maylandia_zebra
ENSLOCG00000002246	scrt2	97	52.581	ENSMMOG00000003327	scrt1b	96	52.751	Mola_mola
ENSLOCG00000002246	scrt2	97	54.206	ENSMMOG00000018345	-	97	51.807	Mola_mola
ENSLOCG00000002246	scrt2	99	65.723	ENSMMOG00000009272	scrt2	99	65.938	Mola_mola
ENSLOCG00000002246	scrt2	97	54.693	ENSMALG00000012704	scrt1b	96	54.693	Monopterus_albus
ENSLOCG00000002246	scrt2	100	59.248	ENSMALG00000013656	scrt2	100	57.994	Monopterus_albus
ENSLOCG00000002246	scrt2	50	76.250	ENSNGAG00000020815	Scrt2	79	74.847	Nannospalax_galili
ENSLOCG00000002246	scrt2	100	62.382	ENSNBRG00000007221	scrt2	100	62.069	Neolamprologus_brichardi
ENSLOCG00000002246	scrt2	97	53.517	ENSNBRG00000014882	-	97	53.086	Neolamprologus_brichardi
ENSLOCG00000002246	scrt2	97	55.663	ENSNBRG00000013983	scrt1b	96	54.221	Neolamprologus_brichardi
ENSLOCG00000002246	scrt2	97	55.340	ENSONIG00000006007	scrt1b	100	53.896	Oreochromis_niloticus
ENSLOCG00000002246	scrt2	100	65.337	ENSONIG00000016758	scrt2	100	65.741	Oreochromis_niloticus
ENSLOCG00000002246	scrt2	100	55.455	ENSONIG00000003152	-	100	54.088	Oreochromis_niloticus
ENSLOCG00000002246	scrt2	97	53.593	ENSONIG00000019809	-	100	53.067	Oreochromis_niloticus
ENSLOCG00000002246	scrt2	97	54.369	ENSORLG00000025651	scrt1b	96	55.305	Oryzias_latipes
ENSLOCG00000002246	scrt2	100	65.741	ENSORLG00000024051	scrt2	100	65.432	Oryzias_latipes
ENSLOCG00000002246	scrt2	97	55.280	ENSORLG00000022825	-	97	53.727	Oryzias_latipes
ENSLOCG00000002246	scrt2	100	65.741	ENSORLG00020011478	scrt2	100	65.432	Oryzias_latipes_hni
ENSLOCG00000002246	scrt2	97	54.369	ENSORLG00020012967	scrt1b	96	55.305	Oryzias_latipes_hni
ENSLOCG00000002246	scrt2	97	54.859	ENSORLG00015010104	-	97	53.292	Oryzias_latipes_hsok
ENSLOCG00000002246	scrt2	100	65.741	ENSORLG00015005524	scrt2	100	65.432	Oryzias_latipes_hsok
ENSLOCG00000002246	scrt2	97	54.369	ENSORLG00015019165	scrt1b	96	55.305	Oryzias_latipes_hsok
ENSLOCG00000002246	scrt2	97	54.369	ENSOMEG00000003925	scrt1b	96	55.305	Oryzias_melastigma
ENSLOCG00000002246	scrt2	97	55.215	ENSOMEG00000000286	-	97	54.688	Oryzias_melastigma
ENSLOCG00000002246	scrt2	100	65.741	ENSOMEG00000002661	scrt2	100	65.432	Oryzias_melastigma
ENSLOCG00000002246	scrt2	97	55.987	ENSPKIG00000022303	SCRT1	97	55.987	Paramormyrops_kingsleyae
ENSLOCG00000002246	scrt2	97	54.369	ENSPKIG00000020085	scrt1a	97	54.369	Paramormyrops_kingsleyae
ENSLOCG00000002246	scrt2	97	55.195	ENSPMGG00000002260	scrt1b	96	54.313	Periophthalmus_magnuspinnatus
ENSLOCG00000002246	scrt2	100	59.006	ENSPMGG00000016561	scrt2	100	59.006	Periophthalmus_magnuspinnatus
ENSLOCG00000002246	scrt2	97	53.438	ENSPMGG00000021402	-	97	53.438	Periophthalmus_magnuspinnatus
ENSLOCG00000002246	scrt2	97	53.750	ENSPFOG00000005616	-	97	52.632	Poecilia_formosa
ENSLOCG00000002246	scrt2	97	55.128	ENSPFOG00000017719	scrt1b	96	55.016	Poecilia_formosa
ENSLOCG00000002246	scrt2	100	65.528	ENSPFOG00000007738	scrt2	100	65.644	Poecilia_formosa
ENSLOCG00000002246	scrt2	97	53.750	ENSPLAG00000011718	-	97	52.632	Poecilia_latipinna
ENSLOCG00000002246	scrt2	100	62.382	ENSPLAG00000005765	scrt2	100	62.069	Poecilia_latipinna
ENSLOCG00000002246	scrt2	97	55.128	ENSPLAG00000009876	scrt1b	96	55.016	Poecilia_latipinna
ENSLOCG00000002246	scrt2	97	53.750	ENSPMEG00000011706	-	97	52.632	Poecilia_mexicana
ENSLOCG00000002246	scrt2	97	55.128	ENSPMEG00000013274	scrt1b	96	55.016	Poecilia_mexicana
ENSLOCG00000002246	scrt2	100	62.382	ENSPMEG00000001538	scrt2	100	62.069	Poecilia_mexicana
ENSLOCG00000002246	scrt2	100	65.217	ENSPREG00000001147	scrt2	100	65.337	Poecilia_reticulata
ENSLOCG00000002246	scrt2	97	53.750	ENSPREG00000012166	-	97	52.351	Poecilia_reticulata
ENSLOCG00000002246	scrt2	97	55.128	ENSPREG00000018985	scrt1b	96	55.016	Poecilia_reticulata
ENSLOCG00000002246	scrt2	97	53.517	ENSPNYG00000008865	-	97	53.086	Pundamilia_nyererei
ENSLOCG00000002246	scrt2	97	55.663	ENSPNYG00000017733	scrt1b	96	55.663	Pundamilia_nyererei
ENSLOCG00000002246	scrt2	100	61.755	ENSPNYG00000013109	scrt2	100	61.442	Pundamilia_nyererei
ENSLOCG00000002246	scrt2	97	53.698	ENSPNAG00000027880	-	98	54.662	Pygocentrus_nattereri
ENSLOCG00000002246	scrt2	97	55.949	ENSPNAG00000017415	scrt1a	97	55.949	Pygocentrus_nattereri
ENSLOCG00000002246	scrt2	97	56.311	ENSSFOG00015001195	SCRT1	97	56.311	Scleropages_formosus
ENSLOCG00000002246	scrt2	97	54.487	ENSSMAG00000019207	scrt1b	96	53.722	Scophthalmus_maximus
ENSLOCG00000002246	scrt2	97	52.727	ENSSMAG00000005122	-	97	52.905	Scophthalmus_maximus
ENSLOCG00000002246	scrt2	97	53.211	ENSSDUG00000013215	-	97	53.251	Seriola_dumerili
ENSLOCG00000002246	scrt2	97	61.587	ENSSDUG00000001637	scrt2	95	62.179	Seriola_dumerili
ENSLOCG00000002246	scrt2	97	55.016	ENSSDUG00000007752	scrt1b	96	55.016	Seriola_dumerili
ENSLOCG00000002246	scrt2	97	55.016	ENSSLDG00000017166	scrt1b	96	55.016	Seriola_lalandi_dorsalis
ENSLOCG00000002246	scrt2	100	65.644	ENSSLDG00000013565	scrt2	100	66.049	Seriola_lalandi_dorsalis
ENSLOCG00000002246	scrt2	97	53.211	ENSSLDG00000016454	-	97	53.251	Seriola_lalandi_dorsalis
ENSLOCG00000002246	scrt2	97	55.272	ENSSPUG00000018637	SCRT2	97	54.952	Sphenodon_punctatus
ENSLOCG00000002246	scrt2	97	53.583	ENSSPAG00000006788	-	97	52.941	Stegastes_partitus
ENSLOCG00000002246	scrt2	100	62.382	ENSSPAG00000014018	scrt2	100	62.069	Stegastes_partitus
ENSLOCG00000002246	scrt2	97	55.016	ENSSPAG00000002200	scrt1b	96	55.016	Stegastes_partitus
ENSLOCG00000002246	scrt2	97	52.870	ENSTRUG00000012719	-	97	54.180	Takifugu_rubripes
ENSLOCG00000002246	scrt2	99	64.151	ENSTRUG00000007620	scrt2	99	63.836	Takifugu_rubripes
ENSLOCG00000002246	scrt2	97	54.545	ENSTRUG00000011637	scrt1b	97	54.545	Takifugu_rubripes
ENSLOCG00000002246	scrt2	97	54.870	ENSTNIG00000018384	scrt1b	96	54.870	Tetraodon_nigroviridis
ENSLOCG00000002246	scrt2	99	67.398	ENSTNIG00000012473	scrt2	99	67.085	Tetraodon_nigroviridis
ENSLOCG00000002246	scrt2	97	53.871	ENSXCOG00000019861	-	97	52.903	Xiphophorus_couchianus
ENSLOCG00000002246	scrt2	97	55.128	ENSXCOG00000019675	scrt1b	96	55.016	Xiphophorus_couchianus
ENSLOCG00000002246	scrt2	100	60.559	ENSXCOG00000014367	scrt2	100	60.736	Xiphophorus_couchianus
ENSLOCG00000002246	scrt2	97	55.128	ENSXMAG00000027885	scrt1b	96	55.016	Xiphophorus_maculatus
ENSLOCG00000002246	scrt2	100	65.528	ENSXMAG00000028567	scrt2	100	65.644	Xiphophorus_maculatus
ENSLOCG00000002246	scrt2	97	53.750	ENSXMAG00000015353	-	97	52.632	Xiphophorus_maculatus