EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 477 bases
Position: chrLG28:2100591-2101067
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002626	Ribosomal_S30	PF04758.14	6.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002632	-	219	-	ENSLOCP00000002626	72 (aa)	-	W5M2L8

Gene Model

Click here to download ENSLOCG00000002253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002253	-	88	100.000	ENSLOCG00000014092	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002253	-	88	92.063	ENSG00000149806	FAU	61	96.667	Homo_sapiens
ENSLOCG00000002253	-	88	66.667	ENSBTAG00000049317	-	83	70.000	Bos_taurus
ENSLOCG00000002253	-	88	85.714	ENSBTAG00000053419	-	60	90.000	Bos_taurus
ENSLOCG00000002253	-	88	71.429	ENSCHIG00000013797	-	63	75.000	Capra_hircus
ENSLOCG00000002253	-	82	96.610	ENSCHIG00000017446	-	100	96.610	Capra_hircus
ENSLOCG00000002253	-	88	73.016	ENSTSYG00000034761	-	95	76.667	Carlito_syrichta
ENSLOCG00000002253	-	88	69.841	ENSTSYG00000034668	-	95	73.333	Carlito_syrichta
ENSLOCG00000002253	-	88	82.540	ENSTSYG00000034685	-	61	86.667	Carlito_syrichta
ENSLOCG00000002253	-	82	96.610	ENSCAPG00000007256	-	100	96.610	Cavia_aperea
ENSLOCG00000002253	-	88	87.500	ENSCANG00000015060	-	95	85.246	Colobus_angolensis_palliatus
ENSLOCG00000002253	-	88	80.952	ENSCGRG00001010571	-	95	85.000	Cricetulus_griseus_chok1gshd
ENSLOCG00000002253	-	88	80.952	ENSCGRG00000019363	-	95	85.000	Cricetulus_griseus_crigri
ENSLOCG00000002253	-	82	96.610	ENSDORG00000003616	-	100	96.610	Dipodomys_ordii
ENSLOCG00000002253	-	88	74.603	ENSEASG00005014582	-	63	78.333	Equus_asinus_asinus
ENSLOCG00000002253	-	88	71.429	ENSEASG00005002823	-	61	75.000	Equus_asinus_asinus
ENSLOCG00000002253	-	88	76.190	ENSECAG00000031753	-	63	80.000	Equus_caballus
ENSLOCG00000002253	-	88	69.841	ENSECAG00000016093	-	61	73.333	Equus_caballus
ENSLOCG00000002253	-	88	68.750	ENSFCAG00000037234	-	82	72.131	Felis_catus
ENSLOCG00000002253	-	97	87.143	ENSFALG00000004541	-	55	96.667	Ficedula_albicollis
ENSLOCG00000002253	-	89	93.750	ENSGALG00000035506	FAU	66	96.667	Gallus_gallus
ENSLOCG00000002253	-	97	70.000	ENSGAGG00000025417	-	63	85.246	Gopherus_agassizii
ENSLOCG00000002253	-	88	68.235	MGP_SPRETEiJ_G0023497	-	53	69.512	Mus_spretus
ENSLOCG00000002253	-	88	82.540	ENSNGAG00000017099	-	95	86.667	Nannospalax_galili
ENSLOCG00000002253	-	88	75.000	ENSPPAG00000032835	-	96	78.462	Pan_paniscus
ENSLOCG00000002253	-	83	74.603	ENSPTIG00000000892	-	61	76.190	Panthera_tigris_altaica
ENSLOCG00000002253	-	82	81.356	ENSPEMG00000018179	-	81	92.857	Peromyscus_maniculatus_bairdii
ENSLOCG00000002253	-	88	92.063	ENSPCIG00000007715	-	61	96.667	Phascolarctos_cinereus
ENSLOCG00000002253	-	88	82.812	ENSPCIG00000002085	-	76	80.328	Phascolarctos_cinereus
ENSLOCG00000002253	-	82	79.661	ENSSBOG00000034795	-	59	83.929	Saimiri_boliviensis_boliviensis
ENSLOCG00000002253	-	79	82.456	ENSSLDG00000004039	-	90	82.456	Seriola_lalandi_dorsalis
ENSLOCG00000002253	-	88	80.952	ENSSSCG00000040023	-	95	90.000	Sus_scrofa
ENSLOCG00000002253	-	83	96.667	ENSTGUG00000016898	-	100	96.667	Taeniopygia_guttata
ENSLOCG00000002253	-	88	90.476	ENSUAMG00000017472	-	63	95.000	Ursus_americanus
ENSLOCG00000002253	-	82	72.881	ENSUAMG00000028348	-	100	72.881	Ursus_americanus
ENSLOCG00000002253	-	83	83.333	ENSUMAG00000022340	-	54	83.333	Ursus_maritimus
ENSLOCG00000002253	-	88	87.302	ENSUMAG00000006180	-	63	91.667	Ursus_maritimus
ENSLOCG00000002253	-	82	72.881	ENSUMAG00000022021	-	100	72.881	Ursus_maritimus