EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002328 (Gene tree)
Gene ID: -
Gene Symbol: rbms3
Alias: zgc:153698
Full Name: RNA binding motif single stranded interacting protein 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 346013 bases
Position: chrLG11:2739912-3085924
Accession: 102685203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002729	RRM_1	PF00076.22	6.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002735	-	1835	XM_006635545	ENSLOCP00000002729	292 (aa)	XP_006635608	W5M2X1

Gene Model

Click here to download ENSLOCG00000002328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002328	rbms3	100	70.370	ENSLOCG00000008622	rbms1a	69	70.370
ENSLOCG00000002328	rbms3	100	72.449	ENSLOCG00000006148	rbms2a	68	72.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002328	rbms3	100	90.102	ENSG00000144642	RBMS3	69	90.102	Homo_sapiens
ENSLOCG00000002328	rbms3	99	82.192	ENSAPOG00000007266	rbms3	84	82.192	Acanthochromis_polyacanthus
ENSLOCG00000002328	rbms3	99	92.042	ENSAPOG00000003432	-	69	92.042	Acanthochromis_polyacanthus
ENSLOCG00000002328	rbms3	99	85.294	ENSAMEG00000005947	RBMS3	100	85.294	Ailuropoda_melanoleuca
ENSLOCG00000002328	rbms3	100	70.408	ENSACIG00000021113	RBMS3	75	70.748	Amphilophus_citrinellus
ENSLOCG00000002328	rbms3	75	93.151	ENSACIG00000006987	-	60	93.151	Amphilophus_citrinellus
ENSLOCG00000002328	rbms3	100	82.993	ENSAOCG00000021274	rbms3	68	82.993	Amphiprion_ocellaris
ENSLOCG00000002328	rbms3	99	92.042	ENSAOCG00000024104	-	71	81.818	Amphiprion_ocellaris
ENSLOCG00000002328	rbms3	99	80.277	ENSAPEG00000009481	-	68	80.277	Amphiprion_percula
ENSLOCG00000002328	rbms3	85	85.657	ENSAPEG00000016299	rbms3	66	85.657	Amphiprion_percula
ENSLOCG00000002328	rbms3	100	83.333	ENSATEG00000024295	rbms3	69	83.673	Anabas_testudineus
ENSLOCG00000002328	rbms3	99	91.696	ENSATEG00000008433	-	69	91.696	Anabas_testudineus
ENSLOCG00000002328	rbms3	99	86.885	ENSAPLG00000012270	RBMS3	70	86.885	Anas_platyrhynchos
ENSLOCG00000002328	rbms3	100	90.444	ENSACAG00000028664	RBMS3	69	90.444	Anolis_carolinensis
ENSLOCG00000002328	rbms3	100	86.275	ENSANAG00000021899	RBMS3	70	86.275	Aotus_nancymaae
ENSLOCG00000002328	rbms3	99	91.003	ENSACLG00000008976	-	67	79.808	Astatotilapia_calliptera
ENSLOCG00000002328	rbms3	100	82.313	ENSACLG00000018506	rbms3	75	82.653	Astatotilapia_calliptera
ENSLOCG00000002328	rbms3	100	88.356	ENSAMXG00000020388	rbms3	70	88.356	Astyanax_mexicanus
ENSLOCG00000002328	rbms3	100	90.444	ENSBTAG00000044062	RBMS3	76	85.761	Bos_taurus
ENSLOCG00000002328	rbms3	100	86.275	ENSCJAG00000004312	RBMS3	70	86.275	Callithrix_jacchus
ENSLOCG00000002328	rbms3	100	85.437	ENSCAFG00000005464	RBMS3	70	85.437	Canis_familiaris
ENSLOCG00000002328	rbms3	100	85.437	ENSCAFG00020024980	RBMS3	70	85.437	Canis_lupus_dingo
ENSLOCG00000002328	rbms3	100	89.761	ENSCHIG00000009144	RBMS3	69	89.761	Capra_hircus
ENSLOCG00000002328	rbms3	100	86.275	ENSTSYG00000002615	RBMS3	92	86.275	Carlito_syrichta
ENSLOCG00000002328	rbms3	99	81.787	ENSCAPG00000017783	RBMS3	73	81.787	Cavia_aperea
ENSLOCG00000002328	rbms3	100	89.420	ENSCPOG00000006457	RBMS3	70	89.420	Cavia_porcellus
ENSLOCG00000002328	rbms3	100	86.275	ENSCCAG00000008671	RBMS3	70	86.275	Cebus_capucinus
ENSLOCG00000002328	rbms3	100	85.621	ENSCATG00000013222	RBMS3	70	85.621	Cercocebus_atys
ENSLOCG00000002328	rbms3	100	89.420	ENSCLAG00000005866	RBMS3	69	89.420	Chinchilla_lanigera
ENSLOCG00000002328	rbms3	93	88.645	ENSCSAG00000009655	RBMS3	99	88.645	Chlorocebus_sabaeus
ENSLOCG00000002328	rbms3	100	85.113	ENSCHOG00000000758	RBMS3	70	85.113	Choloepus_hoffmanni
ENSLOCG00000002328	rbms3	100	91.126	ENSCPBG00000022678	RBMS3	69	91.126	Chrysemys_picta_bellii
ENSLOCG00000002328	rbms3	100	85.948	ENSCANG00000032137	RBMS3	70	85.948	Colobus_angolensis_palliatus
ENSLOCG00000002328	rbms3	100	86.348	ENSCGRG00001007243	Rbms3	70	86.348	Cricetulus_griseus_chok1gshd
ENSLOCG00000002328	rbms3	100	86.348	ENSCGRG00000004599	Rbms3	70	86.348	Cricetulus_griseus_crigri
ENSLOCG00000002328	rbms3	100	90.068	ENSCSEG00000014677	-	70	84.739	Cynoglossus_semilaevis
ENSLOCG00000002328	rbms3	100	82.993	ENSCSEG00000010011	RBMS3	72	83.333	Cynoglossus_semilaevis
ENSLOCG00000002328	rbms3	100	82.653	ENSCVAG00000022354	rbms3	69	82.653	Cyprinodon_variegatus
ENSLOCG00000002328	rbms3	99	91.724	ENSCVAG00000022814	-	76	91.724	Cyprinodon_variegatus
ENSLOCG00000002328	rbms3	100	88.014	ENSDARG00000044574	rbms3	71	88.014	Danio_rerio
ENSLOCG00000002328	rbms3	100	88.737	ENSDNOG00000016645	RBMS3	67	88.737	Dasypus_novemcinctus
ENSLOCG00000002328	rbms3	100	88.055	ENSDORG00000007220	Rbms3	69	88.055	Dipodomys_ordii
ENSLOCG00000002328	rbms3	99	69.180	ENSETEG00000009485	-	70	69.180	Echinops_telfairi
ENSLOCG00000002328	rbms3	62	47.802	ENSEBUG00000005830	rbms3	55	47.802	Eptatretus_burgeri
ENSLOCG00000002328	rbms3	100	90.102	ENSEASG00005006152	RBMS3	69	90.102	Equus_asinus_asinus
ENSLOCG00000002328	rbms3	100	90.102	ENSECAG00000017871	RBMS3	69	90.102	Equus_caballus
ENSLOCG00000002328	rbms3	75	84.255	ENSEEUG00000014337	RBMS3	59	84.255	Erinaceus_europaeus
ENSLOCG00000002328	rbms3	100	78.498	ENSELUG00000002862	rbms3	74	78.498	Esox_lucius
ENSLOCG00000002328	rbms3	99	91.349	ENSELUG00000006905	-	76	91.349	Esox_lucius
ENSLOCG00000002328	rbms3	100	89.420	ENSFCAG00000002130	RBMS3	69	89.420	Felis_catus
ENSLOCG00000002328	rbms3	100	90.785	ENSFALG00000009165	RBMS3	69	90.785	Ficedula_albicollis
ENSLOCG00000002328	rbms3	100	89.420	ENSFDAG00000008278	RBMS3	69	89.420	Fukomys_damarensis
ENSLOCG00000002328	rbms3	100	71.525	ENSFHEG00000004787	RBMS3	75	71.525	Fundulus_heteroclitus
ENSLOCG00000002328	rbms3	99	82.958	ENSGMOG00000002600	-	75	82.958	Gadus_morhua
ENSLOCG00000002328	rbms3	100	90.785	ENSGALG00000011439	RBMS3	69	90.785	Gallus_gallus
ENSLOCG00000002328	rbms3	100	82.993	ENSGAFG00000000168	rbms3	75	82.993	Gambusia_affinis
ENSLOCG00000002328	rbms3	99	92.069	ENSGAFG00000003329	-	69	92.069	Gambusia_affinis
ENSLOCG00000002328	rbms3	93	90.511	ENSGAGG00000004039	RBMS3	100	90.511	Gopherus_agassizii
ENSLOCG00000002328	rbms3	100	86.275	ENSGGOG00000007228	RBMS3	70	86.275	Gorilla_gorilla
ENSLOCG00000002328	rbms3	99	91.003	ENSHBUG00000019785	-	68	85.437	Haplochromis_burtoni
ENSLOCG00000002328	rbms3	100	89.761	ENSHGLG00000002170	RBMS3	69	89.761	Heterocephalus_glaber_female
ENSLOCG00000002328	rbms3	100	89.761	ENSHGLG00100014278	RBMS3	69	89.761	Heterocephalus_glaber_male
ENSLOCG00000002328	rbms3	99	91.034	ENSHCOG00000007894	-	73	91.034	Hippocampus_comes
ENSLOCG00000002328	rbms3	100	87.671	ENSIPUG00000017680	rbms3	70	87.671	Ictalurus_punctatus
ENSLOCG00000002328	rbms3	100	89.761	ENSSTOG00000006324	RBMS3	69	89.761	Ictidomys_tridecemlineatus
ENSLOCG00000002328	rbms3	100	87.372	ENSJJAG00000014708	Rbms3	69	87.372	Jaculus_jaculus
ENSLOCG00000002328	rbms3	100	81.973	ENSKMAG00000020500	rbms3	68	81.973	Kryptolebias_marmoratus
ENSLOCG00000002328	rbms3	99	91.349	ENSKMAG00000012586	-	69	91.349	Kryptolebias_marmoratus
ENSLOCG00000002328	rbms3	99	90.972	ENSLBEG00000027388	-	69	90.972	Labrus_bergylta
ENSLOCG00000002328	rbms3	86	76.894	ENSLBEG00000006677	rbms3	97	76.894	Labrus_bergylta
ENSLOCG00000002328	rbms3	100	92.491	ENSLACG00000010581	RBMS3	69	92.491	Latimeria_chalumnae
ENSLOCG00000002328	rbms3	100	85.113	ENSLAFG00000000354	RBMS3	70	85.113	Loxodonta_africana
ENSLOCG00000002328	rbms3	100	89.761	ENSMFAG00000033300	RBMS3	69	89.761	Macaca_fascicularis
ENSLOCG00000002328	rbms3	100	89.761	ENSMMUG00000004404	RBMS3	69	89.761	Macaca_mulatta
ENSLOCG00000002328	rbms3	100	85.948	ENSMNEG00000035839	RBMS3	76	85.113	Macaca_nemestrina
ENSLOCG00000002328	rbms3	100	85.621	ENSMLEG00000029464	RBMS3	70	85.621	Mandrillus_leucophaeus
ENSLOCG00000002328	rbms3	100	84.014	ENSMAMG00000024043	rbms3	69	84.354	Mastacembelus_armatus
ENSLOCG00000002328	rbms3	99	92.042	ENSMAMG00000002176	-	65	92.042	Mastacembelus_armatus
ENSLOCG00000002328	rbms3	100	82.313	ENSMZEG00005006308	rbms3	69	82.653	Maylandia_zebra
ENSLOCG00000002328	rbms3	99	91.003	ENSMZEG00005026469	-	68	87.129	Maylandia_zebra
ENSLOCG00000002328	rbms3	100	86.348	ENSMAUG00000016436	Rbms3	70	86.348	Mesocricetus_auratus
ENSLOCG00000002328	rbms3	100	86.275	ENSMICG00000049249	RBMS3	71	85.761	Microcebus_murinus
ENSLOCG00000002328	rbms3	100	85.666	ENSMOCG00000006997	Rbms3	70	85.666	Microtus_ochrogaster
ENSLOCG00000002328	rbms3	99	89.273	ENSMMOG00000015071	-	69	89.273	Mola_mola
ENSLOCG00000002328	rbms3	85	86.853	ENSMMOG00000008471	RBMS3	68	87.251	Mola_mola
ENSLOCG00000002328	rbms3	100	84.543	ENSMODG00000015125	RBMS3	70	84.543	Monodelphis_domestica
ENSLOCG00000002328	rbms3	100	83.333	ENSMALG00000019536	RBMS3	69	83.673	Monopterus_albus
ENSLOCG00000002328	rbms3	99	91.349	ENSMALG00000009155	-	69	91.349	Monopterus_albus
ENSLOCG00000002328	rbms3	100	86.007	MGP_CAROLIEiJ_G0032783	Rbms3	100	73.617	Mus_caroli
ENSLOCG00000002328	rbms3	100	86.007	ENSMUSG00000039607	Rbms3	99	73.617	Mus_musculus
ENSLOCG00000002328	rbms3	100	86.054	MGP_PahariEiJ_G0015650	Rbms3	100	73.617	Mus_pahari
ENSLOCG00000002328	rbms3	100	86.007	MGP_SPRETEiJ_G0033930	Rbms3	100	73.617	Mus_spretus
ENSLOCG00000002328	rbms3	100	85.761	ENSMPUG00000011956	RBMS3	70	85.761	Mustela_putorius_furo
ENSLOCG00000002328	rbms3	100	89.761	ENSMLUG00000000659	RBMS3	69	89.761	Myotis_lucifugus
ENSLOCG00000002328	rbms3	100	88.737	ENSNGAG00000014039	Rbms3	70	88.737	Nannospalax_galili
ENSLOCG00000002328	rbms3	99	91.003	ENSNBRG00000018065	-	69	91.003	Neolamprologus_brichardi
ENSLOCG00000002328	rbms3	100	86.275	ENSNLEG00000004129	RBMS3	70	86.275	Nomascus_leucogenys
ENSLOCG00000002328	rbms3	99	77.273	ENSMEUG00000004772	RBMS3	70	77.273	Notamacropus_eugenii
ENSLOCG00000002328	rbms3	99	85.246	ENSOPRG00000006808	RBMS3	60	85.246	Ochotona_princeps
ENSLOCG00000002328	rbms3	100	89.761	ENSODEG00000003651	RBMS3	69	89.761	Octodon_degus
ENSLOCG00000002328	rbms3	100	82.313	ENSONIG00000007172	rbms3	71	82.653	Oreochromis_niloticus
ENSLOCG00000002328	rbms3	100	88.350	ENSOANG00000010529	RBMS3	70	88.350	Ornithorhynchus_anatinus
ENSLOCG00000002328	rbms3	100	84.790	ENSOCUG00000004840	RBMS3	70	84.790	Oryctolagus_cuniculus
ENSLOCG00000002328	rbms3	99	91.349	ENSORLG00000002306	-	69	91.349	Oryzias_latipes
ENSLOCG00000002328	rbms3	100	81.293	ENSORLG00000005370	RBMS3	69	81.293	Oryzias_latipes
ENSLOCG00000002328	rbms3	100	80.952	ENSORLG00020022674	RBMS3	69	80.952	Oryzias_latipes_hni
ENSLOCG00000002328	rbms3	99	91.696	ENSORLG00020008496	-	69	91.696	Oryzias_latipes_hni
ENSLOCG00000002328	rbms3	100	81.633	ENSORLG00015005509	rbms3	69	81.633	Oryzias_latipes_hsok
ENSLOCG00000002328	rbms3	99	91.696	ENSORLG00015015719	-	69	91.696	Oryzias_latipes_hsok
ENSLOCG00000002328	rbms3	100	81.633	ENSOMEG00000014805	RBMS3	75	81.633	Oryzias_melastigma
ENSLOCG00000002328	rbms3	99	91.349	ENSOMEG00000007677	-	76	91.349	Oryzias_melastigma
ENSLOCG00000002328	rbms3	100	84.466	ENSOARG00000014684	RBMS3	70	84.466	Ovis_aries
ENSLOCG00000002328	rbms3	100	86.275	ENSPPAG00000036519	RBMS3	70	86.275	Pan_paniscus
ENSLOCG00000002328	rbms3	100	85.621	ENSPPRG00000002761	RBMS3	70	85.621	Panthera_pardus
ENSLOCG00000002328	rbms3	100	89.420	ENSPTIG00000011568	RBMS3	69	89.420	Panthera_tigris_altaica
ENSLOCG00000002328	rbms3	100	90.102	ENSPTRG00000014709	RBMS3	69	90.102	Pan_troglodytes
ENSLOCG00000002328	rbms3	100	85.621	ENSPANG00000010234	RBMS3	70	85.621	Papio_anubis
ENSLOCG00000002328	rbms3	100	90.785	ENSPSIG00000005269	RBMS3	69	90.785	Pelodiscus_sinensis
ENSLOCG00000002328	rbms3	99	92.042	ENSPMGG00000021683	-	78	91.480	Periophthalmus_magnuspinnatus
ENSLOCG00000002328	rbms3	85	84.462	ENSPMGG00000021544	rbms3	65	84.462	Periophthalmus_magnuspinnatus
ENSLOCG00000002328	rbms3	99	82.131	ENSPEMG00000001117	Rbms3	69	82.131	Peromyscus_maniculatus_bairdii
ENSLOCG00000002328	rbms3	75	93.182	ENSPCIG00000006106	RBMS3	54	93.182	Phascolarctos_cinereus
ENSLOCG00000002328	rbms3	100	83.333	ENSPFOG00000017887	rbms3	69	83.333	Poecilia_formosa
ENSLOCG00000002328	rbms3	100	81.633	ENSPLAG00000016866	-	75	81.633	Poecilia_latipinna
ENSLOCG00000002328	rbms3	99	92.069	ENSPMEG00000002993	-	69	92.069	Poecilia_mexicana
ENSLOCG00000002328	rbms3	99	83.505	ENSPREG00000011880	rbms3	72	83.505	Poecilia_reticulata
ENSLOCG00000002328	rbms3	99	92.069	ENSPREG00000018221	-	54	92.069	Poecilia_reticulata
ENSLOCG00000002328	rbms3	99	76.299	ENSPPYG00000014050	RBMS3	61	76.299	Pongo_abelii
ENSLOCG00000002328	rbms3	99	70.261	ENSPCAG00000006307	RBMS3	70	70.261	Procavia_capensis
ENSLOCG00000002328	rbms3	100	86.601	ENSPCOG00000017136	RBMS3	70	86.601	Propithecus_coquereli
ENSLOCG00000002328	rbms3	100	85.113	ENSPVAG00000014037	RBMS3	70	85.113	Pteropus_vampyrus
ENSLOCG00000002328	rbms3	99	91.003	ENSPNYG00000012624	-	69	91.003	Pundamilia_nyererei
ENSLOCG00000002328	rbms3	100	81.973	ENSPNYG00000010546	rbms3	69	82.313	Pundamilia_nyererei
ENSLOCG00000002328	rbms3	100	88.014	ENSPNAG00000001800	rbms3	70	88.014	Pygocentrus_nattereri
ENSLOCG00000002328	rbms3	100	85.666	ENSRNOG00000025881	Rbms3	70	85.666	Rattus_norvegicus
ENSLOCG00000002328	rbms3	100	85.621	ENSRBIG00000035863	RBMS3	70	85.621	Rhinopithecus_bieti
ENSLOCG00000002328	rbms3	100	85.621	ENSRROG00000027512	RBMS3	74	85.621	Rhinopithecus_roxellana
ENSLOCG00000002328	rbms3	100	86.275	ENSSBOG00000020232	RBMS3	70	86.275	Saimiri_boliviensis_boliviensis
ENSLOCG00000002328	rbms3	100	83.276	ENSSHAG00000002411	RBMS3	73	83.276	Sarcophilus_harrisii
ENSLOCG00000002328	rbms3	99	90.311	ENSSFOG00015008578	rbms3	75	90.311	Scleropages_formosus
ENSLOCG00000002328	rbms3	100	81.293	ENSSMAG00000004997	rbms3	79	81.633	Scophthalmus_maximus
ENSLOCG00000002328	rbms3	96	85.409	ENSSMAG00000020065	-	73	85.409	Scophthalmus_maximus
ENSLOCG00000002328	rbms3	99	92.042	ENSSDUG00000019287	-	69	92.042	Seriola_dumerili
ENSLOCG00000002328	rbms3	100	83.673	ENSSDUG00000013656	RBMS3	70	84.014	Seriola_dumerili
ENSLOCG00000002328	rbms3	100	84.014	ENSSLDG00000020276	RBMS3	68	84.354	Seriola_lalandi_dorsalis
ENSLOCG00000002328	rbms3	99	92.042	ENSSLDG00000013224	-	69	92.042	Seriola_lalandi_dorsalis
ENSLOCG00000002328	rbms3	85	68.797	ENSSARG00000000695	RBMS3	71	68.797	Sorex_araneus
ENSLOCG00000002328	rbms3	99	89.153	ENSSPUG00000017197	RBMS3	96	89.153	Sphenodon_punctatus
ENSLOCG00000002328	rbms3	99	92.042	ENSSPAG00000003983	-	70	81.494	Stegastes_partitus
ENSLOCG00000002328	rbms3	100	82.993	ENSSPAG00000020693	rbms3	70	85.490	Stegastes_partitus
ENSLOCG00000002328	rbms3	100	89.420	ENSSSCG00000036381	RBMS3	69	89.420	Sus_scrofa
ENSLOCG00000002328	rbms3	100	86.364	ENSTGUG00000003572	RBMS3	92	86.364	Taeniopygia_guttata
ENSLOCG00000002328	rbms3	99	90.378	ENSTRUG00000007482	-	72	90.378	Takifugu_rubripes
ENSLOCG00000002328	rbms3	100	82.653	ENSTRUG00000021719	RBMS3	69	82.653	Takifugu_rubripes
ENSLOCG00000002328	rbms3	85	86.090	ENSTBEG00000005362	RBMS3	71	86.090	Tupaia_belangeri
ENSLOCG00000002328	rbms3	99	84.416	ENSTTRG00000006202	RBMS3	70	84.416	Tursiops_truncatus
ENSLOCG00000002328	rbms3	100	85.437	ENSUMAG00000000263	RBMS3	70	85.437	Ursus_maritimus
ENSLOCG00000002328	rbms3	100	73.463	ENSVPAG00000003842	RBMS3	75	73.463	Vicugna_pacos
ENSLOCG00000002328	rbms3	100	85.437	ENSVVUG00000004660	RBMS3	71	85.437	Vulpes_vulpes
ENSLOCG00000002328	rbms3	100	84.466	ENSXETG00000032055	RBMS3	99	84.466	Xenopus_tropicalis
ENSLOCG00000002328	rbms3	99	80.068	ENSXCOG00000019600	-	79	80.068	Xiphophorus_couchianus
ENSLOCG00000002328	rbms3	100	82.993	ENSXMAG00000021783	rbms3	69	82.993	Xiphophorus_maculatus
ENSLOCG00000002328	rbms3	99	92.069	ENSXMAG00000014382	-	69	92.069	Xiphophorus_maculatus