EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002389 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 6586 bases
Position: chrLG26:2313561-2320146
Accession: 102686503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002805	RNase_T	PF00929.24	3.9e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002812	-	2186	XM_006642218	ENSLOCP00000002805	210 (aa)	XP_006642281	W5M347

Gene Model

Click here to download ENSLOCG00000002389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002389	smfn	98	81.068	ENSG00000076043	REXO2	99	83.871	Homo_sapiens
ENSLOCG00000002389	smfn	55	81.739	ENSAPOG00000011971	smfn	99	81.739	Acanthochromis_polyacanthus
ENSLOCG00000002389	smfn	98	81.553	ENSAMEG00000013263	REXO2	87	81.553	Ailuropoda_melanoleuca
ENSLOCG00000002389	smfn	89	81.720	ENSACIG00000023553	smfn	100	81.720	Amphilophus_citrinellus
ENSLOCG00000002389	smfn	64	82.090	ENSAOCG00000011565	smfn	82	82.090	Amphiprion_ocellaris
ENSLOCG00000002389	smfn	94	82.741	ENSAPEG00000012435	smfn	73	82.741	Amphiprion_percula
ENSLOCG00000002389	smfn	95	81.910	ENSATEG00000015385	smfn	71	81.910	Anabas_testudineus
ENSLOCG00000002389	smfn	92	79.793	ENSAPLG00000005045	REXO2	94	79.793	Anas_platyrhynchos
ENSLOCG00000002389	smfn	93	68.500	ENSACAG00000011631	REXO2	94	68.500	Anolis_carolinensis
ENSLOCG00000002389	smfn	68	63.636	ENSANAG00000027457	-	98	63.636	Aotus_nancymaae
ENSLOCG00000002389	smfn	96	83.663	ENSANAG00000020834	REXO2	85	83.663	Aotus_nancymaae
ENSLOCG00000002389	smfn	95	79.397	ENSACLG00000024566	smfn	98	80.851	Astatotilapia_calliptera
ENSLOCG00000002389	smfn	98	81.553	ENSBTAG00000005843	REXO2	87	81.553	Bos_taurus
ENSLOCG00000002389	smfn	90	46.316	WBGene00007429	C08B6.8	93	53.425	Caenorhabditis_elegans
ENSLOCG00000002389	smfn	96	82.673	ENSCJAG00000012434	REXO2	85	82.673	Callithrix_jacchus
ENSLOCG00000002389	smfn	98	80.583	ENSCAFG00000013511	REXO2	87	80.583	Canis_familiaris
ENSLOCG00000002389	smfn	98	81.553	ENSCAFG00020002513	REXO2	87	81.553	Canis_lupus_dingo
ENSLOCG00000002389	smfn	98	81.553	ENSCHIG00000009264	REXO2	87	81.553	Capra_hircus
ENSLOCG00000002389	smfn	91	73.298	ENSTSYG00000027948	-	98	73.298	Carlito_syrichta
ENSLOCG00000002389	smfn	98	81.553	ENSTSYG00000002237	REXO2	87	81.553	Carlito_syrichta
ENSLOCG00000002389	smfn	89	84.946	ENSCAPG00000006093	REXO2	99	84.946	Cavia_aperea
ENSLOCG00000002389	smfn	98	82.039	ENSCPOG00000010548	REXO2	87	82.039	Cavia_porcellus
ENSLOCG00000002389	smfn	96	83.168	ENSCCAG00000034979	REXO2	85	83.168	Cebus_capucinus
ENSLOCG00000002389	smfn	98	81.068	ENSCATG00000015278	REXO2	87	81.068	Cercocebus_atys
ENSLOCG00000002389	smfn	98	82.039	ENSCLAG00000011195	REXO2	87	82.039	Chinchilla_lanigera
ENSLOCG00000002389	smfn	98	81.553	ENSCSAG00000002754	REXO2	87	81.553	Chlorocebus_sabaeus
ENSLOCG00000002389	smfn	98	80.097	ENSCHOG00000000642	-	87	80.097	Choloepus_hoffmanni
ENSLOCG00000002389	smfn	53	80.180	ENSCHOG00000013497	REXO2	79	80.180	Choloepus_hoffmanni
ENSLOCG00000002389	smfn	68	79.720	ENSCPBG00000009359	REXO2	99	79.720	Chrysemys_picta_bellii
ENSLOCG00000002389	smfn	90	55.319	ENSCING00000009858	-	91	55.319	Ciona_intestinalis
ENSLOCG00000002389	smfn	98	81.068	ENSCANG00000034756	REXO2	87	81.068	Colobus_angolensis_palliatus
ENSLOCG00000002389	smfn	97	81.773	ENSCGRG00001013673	-	99	81.773	Cricetulus_griseus_chok1gshd
ENSLOCG00000002389	smfn	96	80.693	ENSCGRG00001010922	-	99	80.693	Cricetulus_griseus_chok1gshd
ENSLOCG00000002389	smfn	99	81.159	ENSCGRG00001019814	-	87	81.159	Cricetulus_griseus_chok1gshd
ENSLOCG00000002389	smfn	99	81.159	ENSCGRG00000006235	Rexo2	87	81.159	Cricetulus_griseus_crigri
ENSLOCG00000002389	smfn	91	85.938	ENSCSEG00000007214	smfn	71	84.772	Cynoglossus_semilaevis
ENSLOCG00000002389	smfn	87	79.235	ENSCVAG00000012008	smfn	99	79.235	Cyprinodon_variegatus
ENSLOCG00000002389	smfn	94	82.741	ENSDARG00000009806	smfn	75	82.741	Danio_rerio
ENSLOCG00000002389	smfn	86	83.333	ENSDNOG00000046533	REXO2	86	83.333	Dasypus_novemcinctus
ENSLOCG00000002389	smfn	98	82.039	ENSDORG00000011255	Rexo2	87	82.039	Dipodomys_ordii
ENSLOCG00000002389	smfn	92	66.839	ENSDORG00000025142	-	90	63.592	Dipodomys_ordii
ENSLOCG00000002389	smfn	83	54.023	FBgn0039115	CG10214	82	54.023	Drosophila_melanogaster
ENSLOCG00000002389	smfn	85	79.775	ENSEBUG00000013964	REXO2	64	76.064	Eptatretus_burgeri
ENSLOCG00000002389	smfn	98	81.553	ENSEASG00005006674	REXO2	87	81.553	Equus_asinus_asinus
ENSLOCG00000002389	smfn	98	81.553	ENSECAG00000005988	REXO2	87	81.553	Equus_caballus
ENSLOCG00000002389	smfn	97	82.353	ENSELUG00000020072	smfn	71	82.353	Esox_lucius
ENSLOCG00000002389	smfn	98	81.553	ENSFCAG00000018632	REXO2	87	81.553	Felis_catus
ENSLOCG00000002389	smfn	90	79.894	ENSFALG00000010044	REXO2	94	79.894	Ficedula_albicollis
ENSLOCG00000002389	smfn	96	83.663	ENSFDAG00000011764	REXO2	85	83.663	Fukomys_damarensis
ENSLOCG00000002389	smfn	91	82.723	ENSGMOG00000006370	smfn	99	82.723	Gadus_morhua
ENSLOCG00000002389	smfn	94	82.234	ENSGALG00000035980	REXO2	89	79.227	Gallus_gallus
ENSLOCG00000002389	smfn	96	79.104	ENSGAFG00000015349	smfn	72	79.104	Gambusia_affinis
ENSLOCG00000002389	smfn	93	80.513	ENSGACG00000020096	smfn	95	80.513	Gasterosteus_aculeatus
ENSLOCG00000002389	smfn	98	78.537	ENSGAGG00000021126	REXO2	89	78.537	Gopherus_agassizii
ENSLOCG00000002389	smfn	98	81.068	ENSGGOG00000023267	REXO2	87	81.068	Gorilla_gorilla
ENSLOCG00000002389	smfn	62	80.769	ENSHBUG00000020097	REXO2	63	80.769	Haplochromis_burtoni
ENSLOCG00000002389	smfn	98	81.553	ENSHGLG00000013556	REXO2	87	81.553	Heterocephalus_glaber_female
ENSLOCG00000002389	smfn	98	82.039	ENSHGLG00100005257	REXO2	87	82.039	Heterocephalus_glaber_male
ENSLOCG00000002389	smfn	86	78.333	ENSHCOG00000007122	smfn	98	78.333	Hippocampus_comes
ENSLOCG00000002389	smfn	94	87.817	ENSIPUG00000020440	rexo2	75	86.275	Ictalurus_punctatus
ENSLOCG00000002389	smfn	99	82.126	ENSSTOG00000012465	REXO2	87	82.126	Ictidomys_tridecemlineatus
ENSLOCG00000002389	smfn	98	59.709	ENSJJAG00000022605	-	72	75.000	Jaculus_jaculus
ENSLOCG00000002389	smfn	98	82.039	ENSJJAG00000013710	-	87	82.039	Jaculus_jaculus
ENSLOCG00000002389	smfn	91	83.854	ENSKMAG00000016795	smfn	72	81.281	Kryptolebias_marmoratus
ENSLOCG00000002389	smfn	86	86.188	ENSLBEG00000006021	smfn	96	86.188	Labrus_bergylta
ENSLOCG00000002389	smfn	96	74.020	ENSLACG00000018623	REXO2	83	74.020	Latimeria_chalumnae
ENSLOCG00000002389	smfn	95	84.422	ENSLAFG00000012451	REXO2	87	81.553	Loxodonta_africana
ENSLOCG00000002389	smfn	98	81.068	ENSMFAG00000041155	REXO2	87	81.068	Macaca_fascicularis
ENSLOCG00000002389	smfn	98	81.068	ENSMMUG00000012269	REXO2	87	81.068	Macaca_mulatta
ENSLOCG00000002389	smfn	98	81.068	ENSMNEG00000033379	REXO2	87	81.068	Macaca_nemestrina
ENSLOCG00000002389	smfn	98	81.068	ENSMLEG00000036571	REXO2	87	81.068	Mandrillus_leucophaeus
ENSLOCG00000002389	smfn	96	81.095	ENSMAMG00000021209	smfn	72	81.095	Mastacembelus_armatus
ENSLOCG00000002389	smfn	95	79.397	ENSMZEG00005023224	-	76	79.397	Maylandia_zebra
ENSLOCG00000002389	smfn	95	79.397	ENSMZEG00005020730	REXO2	76	79.397	Maylandia_zebra
ENSLOCG00000002389	smfn	76	80.864	ENSMGAG00000003026	REXO2	99	80.864	Meleagris_gallopavo
ENSLOCG00000002389	smfn	99	81.159	ENSMAUG00000014576	Rexo2	87	81.159	Mesocricetus_auratus
ENSLOCG00000002389	smfn	98	82.039	ENSMICG00000010094	REXO2	87	82.039	Microcebus_murinus
ENSLOCG00000002389	smfn	98	81.553	ENSMOCG00000009016	Rexo2	87	81.553	Microtus_ochrogaster
ENSLOCG00000002389	smfn	99	74.163	ENSMMOG00000006430	smfn	78	74.163	Mola_mola
ENSLOCG00000002389	smfn	98	81.068	ENSMODG00000013913	REXO2	87	81.068	Monodelphis_domestica
ENSLOCG00000002389	smfn	95	79.000	ENSMALG00000018130	smfn	57	79.000	Monopterus_albus
ENSLOCG00000002389	smfn	98	81.463	MGP_CAROLIEiJ_G0032166	Rexo2	86	81.463	Mus_caroli
ENSLOCG00000002389	smfn	98	81.463	ENSMUSG00000032026	Rexo2	86	81.463	Mus_musculus
ENSLOCG00000002389	smfn	98	81.463	MGP_PahariEiJ_G0015034	Rexo2	86	81.463	Mus_pahari
ENSLOCG00000002389	smfn	98	81.463	MGP_SPRETEiJ_G0033305	Rexo2	86	81.463	Mus_spretus
ENSLOCG00000002389	smfn	98	81.553	ENSMPUG00000003947	REXO2	87	81.553	Mustela_putorius_furo
ENSLOCG00000002389	smfn	98	81.068	ENSMLUG00000009030	REXO2	87	81.068	Myotis_lucifugus
ENSLOCG00000002389	smfn	96	83.168	ENSNGAG00000008819	Rexo2	99	83.168	Nannospalax_galili
ENSLOCG00000002389	smfn	89	81.183	ENSNBRG00000006529	smfn	98	81.183	Neolamprologus_brichardi
ENSLOCG00000002389	smfn	98	81.068	ENSNLEG00000029745	REXO2	87	81.068	Nomascus_leucogenys
ENSLOCG00000002389	smfn	98	80.583	ENSMEUG00000011558	REXO2	94	80.583	Notamacropus_eugenii
ENSLOCG00000002389	smfn	96	59.406	ENSOPRG00000011076	REXO2	85	59.406	Ochotona_princeps
ENSLOCG00000002389	smfn	84	69.318	ENSODEG00000016046	-	88	69.318	Octodon_degus
ENSLOCG00000002389	smfn	89	84.946	ENSODEG00000009750	-	99	84.946	Octodon_degus
ENSLOCG00000002389	smfn	94	80.808	ENSONIG00000001954	smfn	85	80.808	Oreochromis_niloticus
ENSLOCG00000002389	smfn	99	80.193	ENSOANG00000001754	REXO2	87	80.193	Ornithorhynchus_anatinus
ENSLOCG00000002389	smfn	98	82.039	ENSOCUG00000004274	REXO2	82	82.039	Oryctolagus_cuniculus
ENSLOCG00000002389	smfn	93	86.735	ENSORLG00000005119	smfn	64	86.735	Oryzias_latipes
ENSLOCG00000002389	smfn	93	86.735	ENSORLG00020010121	smfn	64	86.735	Oryzias_latipes_hni
ENSLOCG00000002389	smfn	93	86.224	ENSORLG00015015699	smfn	63	86.224	Oryzias_latipes_hsok
ENSLOCG00000002389	smfn	68	81.690	ENSOMEG00000008940	-	99	81.690	Oryzias_melastigma
ENSLOCG00000002389	smfn	93	82.653	ENSOMEG00000016878	REXO2	72	82.653	Oryzias_melastigma
ENSLOCG00000002389	smfn	98	82.039	ENSOGAG00000016860	REXO2	87	82.039	Otolemur_garnettii
ENSLOCG00000002389	smfn	95	84.422	ENSOARG00000001040	REXO2	95	82.759	Ovis_aries
ENSLOCG00000002389	smfn	98	81.068	ENSPPAG00000039849	REXO2	87	81.068	Pan_paniscus
ENSLOCG00000002389	smfn	98	81.553	ENSPPRG00000007255	REXO2	87	81.553	Panthera_pardus
ENSLOCG00000002389	smfn	89	84.409	ENSPTIG00000015578	REXO2	99	84.409	Panthera_tigris_altaica
ENSLOCG00000002389	smfn	98	81.068	ENSPTRG00000004306	REXO2	87	81.068	Pan_troglodytes
ENSLOCG00000002389	smfn	98	81.068	ENSPANG00000010675	REXO2	87	81.068	Papio_anubis
ENSLOCG00000002389	smfn	99	84.689	ENSPKIG00000000911	smfn	77	89.865	Paramormyrops_kingsleyae
ENSLOCG00000002389	smfn	94	82.828	ENSPSIG00000005151	REXO2	73	82.090	Pelodiscus_sinensis
ENSLOCG00000002389	smfn	89	84.492	ENSPMGG00000007442	smfn	99	84.492	Periophthalmus_magnuspinnatus
ENSLOCG00000002389	smfn	98	66.505	ENSPEMG00000001421	Rexo2	86	66.505	Peromyscus_maniculatus_bairdii
ENSLOCG00000002389	smfn	55	81.897	ENSPMAG00000001022	REXO2	100	81.897	Petromyzon_marinus
ENSLOCG00000002389	smfn	99	80.676	ENSPCIG00000011227	REXO2	55	80.676	Phascolarctos_cinereus
ENSLOCG00000002389	smfn	96	81.188	ENSPFOG00000017861	smfn	99	81.188	Poecilia_formosa
ENSLOCG00000002389	smfn	84	78.409	ENSPLAG00000007327	REXO2	67	78.409	Poecilia_latipinna
ENSLOCG00000002389	smfn	96	81.095	ENSPMEG00000017343	smfn	72	81.095	Poecilia_mexicana
ENSLOCG00000002389	smfn	96	79.602	ENSPREG00000016438	smfn	72	79.602	Poecilia_reticulata
ENSLOCG00000002389	smfn	98	81.068	ENSPPYG00000003895	REXO2	87	81.068	Pongo_abelii
ENSLOCG00000002389	smfn	95	83.920	ENSPCAG00000005237	REXO2	87	81.068	Procavia_capensis
ENSLOCG00000002389	smfn	79	82.530	ENSPCOG00000027639	REXO2	85	82.530	Propithecus_coquereli
ENSLOCG00000002389	smfn	98	70.673	ENSPVAG00000005295	REXO2	87	70.673	Pteropus_vampyrus
ENSLOCG00000002389	smfn	95	78.894	ENSPNYG00000018401	smfn	76	78.894	Pundamilia_nyererei
ENSLOCG00000002389	smfn	92	88.660	ENSPNAG00000005290	smfn	75	86.700	Pygocentrus_nattereri
ENSLOCG00000002389	smfn	98	81.951	ENSRNOG00000018939	Rexo2	86	81.951	Rattus_norvegicus
ENSLOCG00000002389	smfn	98	81.068	ENSRBIG00000037809	REXO2	87	81.068	Rhinopithecus_bieti
ENSLOCG00000002389	smfn	98	81.068	ENSRROG00000038928	REXO2	87	81.068	Rhinopithecus_roxellana
ENSLOCG00000002389	smfn	91	42.211	YLR059C	REX2	74	42.211	Saccharomyces_cerevisiae
ENSLOCG00000002389	smfn	96	83.663	ENSSBOG00000028651	REXO2	85	83.663	Saimiri_boliviensis_boliviensis
ENSLOCG00000002389	smfn	98	81.068	ENSSHAG00000008008	REXO2	88	81.068	Sarcophilus_harrisii
ENSLOCG00000002389	smfn	88	87.568	ENSSFOG00015022414	smfn	98	87.568	Scleropages_formosus
ENSLOCG00000002389	smfn	95	80.000	ENSSMAG00000003168	smfn	73	80.000	Scophthalmus_maximus
ENSLOCG00000002389	smfn	95	84.000	ENSSDUG00000015624	smfn	70	84.000	Seriola_dumerili
ENSLOCG00000002389	smfn	95	84.500	ENSSLDG00000014005	smfn	70	84.500	Seriola_lalandi_dorsalis
ENSLOCG00000002389	smfn	60	86.614	ENSSARG00000014530	REXO2	100	86.614	Sorex_araneus
ENSLOCG00000002389	smfn	75	79.747	ENSSPUG00000006005	REXO2	85	79.747	Sphenodon_punctatus
ENSLOCG00000002389	smfn	88	85.946	ENSSPAG00000001530	smfn	99	85.946	Stegastes_partitus
ENSLOCG00000002389	smfn	98	81.553	ENSSSCG00000015056	REXO2	87	81.553	Sus_scrofa
ENSLOCG00000002389	smfn	95	79.899	ENSTGUG00000000121	REXO2	88	77.670	Taeniopygia_guttata
ENSLOCG00000002389	smfn	92	79.381	ENSTRUG00000021529	smfn	76	76.699	Takifugu_rubripes
ENSLOCG00000002389	smfn	90	81.579	ENSTNIG00000008588	smfn	90	78.325	Tetraodon_nigroviridis
ENSLOCG00000002389	smfn	98	82.039	ENSTBEG00000017040	REXO2	87	82.039	Tupaia_belangeri
ENSLOCG00000002389	smfn	99	81.159	ENSTTRG00000014928	REXO2	87	81.159	Tursiops_truncatus
ENSLOCG00000002389	smfn	98	74.396	ENSUAMG00000019096	REXO2	85	81.928	Ursus_americanus
ENSLOCG00000002389	smfn	98	81.553	ENSUMAG00000003770	REXO2	87	81.553	Ursus_maritimus
ENSLOCG00000002389	smfn	89	66.129	ENSVPAG00000006301	REXO2	99	66.129	Vicugna_pacos
ENSLOCG00000002389	smfn	99	81.159	ENSVVUG00000025223	REXO2	88	81.159	Vulpes_vulpes
ENSLOCG00000002389	smfn	98	81.553	ENSXETG00000012648	rexo2	84	81.159	Xenopus_tropicalis
ENSLOCG00000002389	smfn	92	76.684	ENSXCOG00000018838	smfn	95	79.032	Xiphophorus_couchianus
ENSLOCG00000002389	smfn	96	77.114	ENSXMAG00000021125	smfn	64	77.114	Xiphophorus_maculatus