EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002423 (Gene tree)
Gene ID: 102691566
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 10840 bases
Position: chrLG19:4093175-4104014
Accession: 102691566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002851	R3H	PF01424.22	1.2e-06	1	1
ENSLOCP00000002870	R3H	PF01424.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002876	-	4225	-	ENSLOCP00000002870	279 (aa)	-	W5M3B2
ENSLOCT00000002857	-	4783	XM_006639809	ENSLOCP00000002851	260 (aa)	XP_006639872	W5M393

Gene Model

Click here to download ENSLOCG00000002423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002423	r3hdm4	91	58.159	ENSG00000198858	R3HDM4	96	57.025	Homo_sapiens
ENSLOCG00000002423	r3hdm4	91	58.996	ENSAMEG00000003001	R3HDM4	98	58.996	Ailuropoda_melanoleuca
ENSLOCG00000002423	r3hdm4	100	68.966	ENSACIG00000004672	r3hdm4	100	68.199	Amphilophus_citrinellus
ENSLOCG00000002423	r3hdm4	98	70.930	ENSATEG00000015913	r3hdm4	99	70.543	Anabas_testudineus
ENSLOCG00000002423	r3hdm4	91	58.996	ENSANAG00000029748	R3HDM4	98	58.996	Aotus_nancymaae
ENSLOCG00000002423	r3hdm4	91	58.159	ENSBTAG00000046406	R3HDM4	88	58.159	Bos_taurus
ENSLOCG00000002423	r3hdm4	91	58.824	ENSCJAG00000020114	R3HDM4	89	58.824	Callithrix_jacchus
ENSLOCG00000002423	r3hdm4	96	56.972	ENSCAFG00000019665	R3HDM4	88	58.996	Canis_familiaris
ENSLOCG00000002423	r3hdm4	96	56.574	ENSCAFG00020016880	R3HDM4	92	56.574	Canis_lupus_dingo
ENSLOCG00000002423	r3hdm4	91	57.741	ENSCHIG00000020110	R3HDM4	92	57.741	Capra_hircus
ENSLOCG00000002423	r3hdm4	91	58.577	ENSCCAG00000019955	R3HDM4	87	58.577	Cebus_capucinus
ENSLOCG00000002423	r3hdm4	100	54.613	ENSCATG00000037269	R3HDM4	94	55.686	Cercocebus_atys
ENSLOCG00000002423	r3hdm4	93	55.967	ENSCLAG00000007094	R3HDM4	99	55.967	Chinchilla_lanigera
ENSLOCG00000002423	r3hdm4	100	54.647	ENSCSAG00000012574	R3HDM4	94	56.522	Chlorocebus_sabaeus
ENSLOCG00000002423	r3hdm4	100	65.019	ENSCPBG00000009805	R3HDM4	100	65.019	Chrysemys_picta_bellii
ENSLOCG00000002423	r3hdm4	94	57.490	ENSCANG00000040439	R3HDM4	86	57.490	Colobus_angolensis_palliatus
ENSLOCG00000002423	r3hdm4	99	54.511	ENSCGRG00001021650	R3hdm4	94	56.972	Cricetulus_griseus_chok1gshd
ENSLOCG00000002423	r3hdm4	99	54.511	ENSCGRG00000013169	R3hdm4	94	56.972	Cricetulus_griseus_crigri
ENSLOCG00000002423	r3hdm4	100	64.368	ENSCSEG00000018211	r3hdm4	100	63.602	Cynoglossus_semilaevis
ENSLOCG00000002423	r3hdm4	100	68.966	ENSCVAG00000017127	r3hdm4	100	68.582	Cyprinodon_variegatus
ENSLOCG00000002423	r3hdm4	95	55.469	ENSDORG00000006605	R3hdm4	99	56.452	Dipodomys_ordii
ENSLOCG00000002423	r3hdm4	91	58.577	ENSEASG00005021556	R3HDM4	87	58.577	Equus_asinus_asinus
ENSLOCG00000002423	r3hdm4	91	58.577	ENSECAG00000000003	R3HDM4	88	58.577	Equus_caballus
ENSLOCG00000002423	r3hdm4	100	55.311	ENSFCAG00000042437	R3HDM4	88	59.833	Felis_catus
ENSLOCG00000002423	r3hdm4	91	67.511	ENSFALG00000013938	R3HDM4	98	67.511	Ficedula_albicollis
ENSLOCG00000002423	r3hdm4	93	55.738	ENSFDAG00000017040	R3HDM4	99	55.738	Fukomys_damarensis
ENSLOCG00000002423	r3hdm4	100	69.732	ENSFHEG00000017636	r3hdm4	100	69.349	Fundulus_heteroclitus
ENSLOCG00000002423	r3hdm4	91	64.831	ENSGMOG00000001231	r3hdm4	97	64.831	Gadus_morhua
ENSLOCG00000002423	r3hdm4	100	62.500	ENSGALG00000001998	R3HDM4	100	62.500	Gallus_gallus
ENSLOCG00000002423	r3hdm4	100	71.264	ENSGAFG00000004173	r3hdm4	100	70.881	Gambusia_affinis
ENSLOCG00000002423	r3hdm4	100	64.639	ENSGAGG00000019698	R3HDM4	100	64.639	Gopherus_agassizii
ENSLOCG00000002423	r3hdm4	91	58.159	ENSGGOG00000008040	R3HDM4	98	58.159	Gorilla_gorilla
ENSLOCG00000002423	r3hdm4	100	69.732	ENSHBUG00000014810	r3hdm4	100	69.847	Haplochromis_burtoni
ENSLOCG00000002423	r3hdm4	96	54.000	ENSHGLG00000016194	R3HDM4	90	55.144	Heterocephalus_glaber_female
ENSLOCG00000002423	r3hdm4	99	65.000	ENSHCOG00000008422	r3hdm4	99	64.615	Hippocampus_comes
ENSLOCG00000002423	r3hdm4	100	68.582	ENSIPUG00000006716	r3hdm4	100	68.199	Ictalurus_punctatus
ENSLOCG00000002423	r3hdm4	91	55.230	ENSSTOG00000023015	R3HDM4	98	55.230	Ictidomys_tridecemlineatus
ENSLOCG00000002423	r3hdm4	93	56.800	ENSJJAG00000012475	R3hdm4	93	56.800	Jaculus_jaculus
ENSLOCG00000002423	r3hdm4	100	68.966	ENSKMAG00000005853	r3hdm4	100	67.816	Kryptolebias_marmoratus
ENSLOCG00000002423	r3hdm4	100	69.847	ENSLBEG00000000730	r3hdm4	100	69.084	Labrus_bergylta
ENSLOCG00000002423	r3hdm4	100	66.538	ENSLACG00000016445	R3HDM4	100	66.538	Latimeria_chalumnae
ENSLOCG00000002423	r3hdm4	90	58.650	ENSLAFG00000017796	R3HDM4	91	58.650	Loxodonta_africana
ENSLOCG00000002423	r3hdm4	100	54.275	ENSMFAG00000044131	R3HDM4	94	56.126	Macaca_fascicularis
ENSLOCG00000002423	r3hdm4	92	56.612	ENSMMUG00000009682	R3HDM4	96	56.612	Macaca_mulatta
ENSLOCG00000002423	r3hdm4	91	58.577	ENSMNEG00000044115	R3HDM4	96	58.577	Macaca_nemestrina
ENSLOCG00000002423	r3hdm4	91	58.506	ENSMLEG00000035693	R3HDM4	89	57.676	Mandrillus_leucophaeus
ENSLOCG00000002423	r3hdm4	87	68.996	ENSMAMG00000005652	r3hdm4	91	68.559	Mastacembelus_armatus
ENSLOCG00000002423	r3hdm4	99	53.903	ENSMAUG00000010611	R3hdm4	94	56.299	Mesocricetus_auratus
ENSLOCG00000002423	r3hdm4	91	58.996	ENSMICG00000010124	R3HDM4	88	58.996	Microcebus_murinus
ENSLOCG00000002423	r3hdm4	99	54.924	ENSMOCG00000002646	R3hdm4	94	57.028	Microtus_ochrogaster
ENSLOCG00000002423	r3hdm4	100	67.939	ENSMMOG00000008253	r3hdm4	100	67.176	Mola_mola
ENSLOCG00000002423	r3hdm4	88	62.174	ENSMODG00000005698	R3HDM4	99	62.174	Monodelphis_domestica
ENSLOCG00000002423	r3hdm4	100	68.702	ENSMALG00000018856	r3hdm4	100	66.284	Monopterus_albus
ENSLOCG00000002423	r3hdm4	99	53.992	MGP_CAROLIEiJ_G0015551	R3hdm4	89	57.627	Mus_caroli
ENSLOCG00000002423	r3hdm4	99	53.817	ENSMUSG00000035781	R3hdm4	89	57.447	Mus_musculus
ENSLOCG00000002423	r3hdm4	99	53.962	MGP_PahariEiJ_G0030964	R3hdm4	89	57.203	Mus_pahari
ENSLOCG00000002423	r3hdm4	99	54.167	MGP_SPRETEiJ_G0016369	-	75	57.806	Mus_spretus
ENSLOCG00000002423	r3hdm4	91	60.251	ENSMPUG00000009394	R3HDM4	88	60.251	Mustela_putorius_furo
ENSLOCG00000002423	r3hdm4	100	68.966	ENSNBRG00000004438	r3hdm4	100	69.084	Neolamprologus_brichardi
ENSLOCG00000002423	r3hdm4	86	55.844	ENSNLEG00000001022	R3HDM4	99	55.844	Nomascus_leucogenys
ENSLOCG00000002423	r3hdm4	90	61.017	ENSMEUG00000011020	R3HDM4	99	61.017	Notamacropus_eugenii
ENSLOCG00000002423	r3hdm4	100	52.045	ENSODEG00000011745	R3HDM4	91	55.510	Octodon_degus
ENSLOCG00000002423	r3hdm4	100	69.732	ENSONIG00000012675	r3hdm4	92	69.084	Oreochromis_niloticus
ENSLOCG00000002423	r3hdm4	100	68.582	ENSOMEG00000003005	r3hdm4	100	68.582	Oryzias_melastigma
ENSLOCG00000002423	r3hdm4	90	58.228	ENSOGAG00000025656	R3HDM4	89	58.228	Otolemur_garnettii
ENSLOCG00000002423	r3hdm4	91	58.577	ENSOARG00000009945	R3HDM4	98	58.577	Ovis_aries
ENSLOCG00000002423	r3hdm4	91	58.159	ENSPPAG00000042371	R3HDM4	98	58.159	Pan_paniscus
ENSLOCG00000002423	r3hdm4	100	54.275	ENSPANG00000015203	R3HDM4	94	56.126	Papio_anubis
ENSLOCG00000002423	r3hdm4	100	68.821	ENSPKIG00000007421	r3hdm4	100	68.061	Paramormyrops_kingsleyae
ENSLOCG00000002423	r3hdm4	100	62.977	ENSPMGG00000020467	r3hdm4	100	61.597	Periophthalmus_magnuspinnatus
ENSLOCG00000002423	r3hdm4	90	58.898	ENSPEMG00000008365	Tmem259	97	58.898	Peromyscus_maniculatus_bairdii
ENSLOCG00000002423	r3hdm4	100	68.582	ENSPFOG00000003199	r3hdm4	100	68.582	Poecilia_formosa
ENSLOCG00000002423	r3hdm4	100	68.582	ENSPMEG00000014183	r3hdm4	100	68.582	Poecilia_mexicana
ENSLOCG00000002423	r3hdm4	100	68.966	ENSPREG00000010709	r3hdm4	100	68.582	Poecilia_reticulata
ENSLOCG00000002423	r3hdm4	91	58.650	ENSPPYG00000009297	R3HDM4	89	58.650	Pongo_abelii
ENSLOCG00000002423	r3hdm4	58	56.579	ENSPCAG00000010997	R3HDM4	56	56.579	Procavia_capensis
ENSLOCG00000002423	r3hdm4	91	58.577	ENSPCOG00000016785	R3HDM4	88	58.577	Propithecus_coquereli
ENSLOCG00000002423	r3hdm4	100	69.732	ENSPNYG00000017489	r3hdm4	100	69.847	Pundamilia_nyererei
ENSLOCG00000002423	r3hdm4	99	55.056	ENSRNOG00000011489	R3hdm4	89	58.403	Rattus_norvegicus
ENSLOCG00000002423	r3hdm4	91	58.577	ENSRROG00000028842	R3HDM4	89	58.577	Rhinopithecus_roxellana
ENSLOCG00000002423	r3hdm4	91	58.025	ENSSBOG00000019298	R3HDM4	71	58.025	Saimiri_boliviensis_boliviensis
ENSLOCG00000002423	r3hdm4	56	62.329	ENSSHAG00000003036	-	100	62.329	Sarcophilus_harrisii
ENSLOCG00000002423	r3hdm4	95	73.984	ENSSFOG00015020574	r3hdm4	90	73.984	Scleropages_formosus
ENSLOCG00000002423	r3hdm4	100	68.321	ENSSMAG00000021090	r3hdm4	72	69.076	Scophthalmus_maximus
ENSLOCG00000002423	r3hdm4	100	71.756	ENSSDUG00000008488	r3hdm4	100	69.847	Seriola_dumerili
ENSLOCG00000002423	r3hdm4	100	71.756	ENSSLDG00000025328	r3hdm4	100	69.847	Seriola_lalandi_dorsalis
ENSLOCG00000002423	r3hdm4	91	65.401	ENSSPUG00000005434	R3HDM4	93	65.401	Sphenodon_punctatus
ENSLOCG00000002423	r3hdm4	99	70.498	ENSSPAG00000002562	r3hdm4	99	68.846	Stegastes_partitus
ENSLOCG00000002423	r3hdm4	91	58.159	ENSSSCG00000013419	R3HDM4	88	58.159	Sus_scrofa
ENSLOCG00000002423	r3hdm4	78	60.870	ENSTGUG00000000663	R3HDM4	99	61.836	Taeniopygia_guttata
ENSLOCG00000002423	r3hdm4	91	57.741	ENSTTRG00000001470	R3HDM4	97	57.322	Tursiops_truncatus
ENSLOCG00000002423	r3hdm4	100	49.451	ENSUAMG00000005751	R3HDM4	100	59.375	Ursus_americanus
ENSLOCG00000002423	r3hdm4	100	54.745	ENSVVUG00000022685	R3HDM4	88	58.996	Vulpes_vulpes
ENSLOCG00000002423	r3hdm4	99	49.027	ENSXETG00000033624	R3HDM4	96	48.996	Xenopus_tropicalis
ENSLOCG00000002423	r3hdm4	100	70.229	ENSXCOG00000005127	r3hdm4	100	69.847	Xiphophorus_couchianus
ENSLOCG00000002423	r3hdm4	100	70.498	ENSXMAG00000022875	r3hdm4	100	70.115	Xiphophorus_maculatus