EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002427 (Gene tree)
Gene ID: 102698713
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 15627 bases
Position: chrLG18:4281853-4297479
Accession: 102698713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000002852	zf-C2H2	PF00096.26	2.9e-28	1	6
ENSLOCP00000002852	zf-C2H2	PF00096.26	2.9e-28	2	6
ENSLOCP00000002852	zf-C2H2	PF00096.26	2.9e-28	3	6
ENSLOCP00000002852	zf-C2H2	PF00096.26	2.9e-28	4	6
ENSLOCP00000002852	zf-C2H2	PF00096.26	2.9e-28	5	6
ENSLOCP00000002852	zf-C2H2	PF00096.26	2.9e-28	6	6
ENSLOCP00000002852	zf-met	PF12874.7	3.7e-14	1	3
ENSLOCP00000002852	zf-met	PF12874.7	3.7e-14	2	3
ENSLOCP00000002852	zf-met	PF12874.7	3.7e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000002858	-	6173	XM_006639422	ENSLOCP00000002852	1092 (aa)	XP_006639485	W5M394

Gene Model

Click here to download ENSLOCG00000002427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002427	sall4	71	50.000	ENSLOCG00000003926	znf236	80	50.000
ENSLOCG00000002427	sall4	55	48.980	ENSLOCG00000009778	prdm5	73	48.980
ENSLOCG00000002427	sall4	58	57.143	ENSLOCG00000004208	-	99	57.143
ENSLOCG00000002427	sall4	58	46.154	ENSLOCG00000016466	-	99	46.154
ENSLOCG00000002427	sall4	96	63.462	ENSLOCG00000007283	sall1b	83	73.050
ENSLOCG00000002427	sall4	100	63.462	ENSLOCG00000007831	sall3a	100	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002427	sall4	100	47.871	ENSG00000101115	SALL4	100	59.615	Homo_sapiens
ENSLOCG00000002427	sall4	100	61.948	ENSAPOG00000002465	sall4	100	61.656	Acanthochromis_polyacanthus
ENSLOCG00000002427	sall4	100	47.323	ENSAMEG00000013250	-	99	49.183	Ailuropoda_melanoleuca
ENSLOCG00000002427	sall4	100	61.991	ENSACIG00000017298	sall4	100	61.991	Amphilophus_citrinellus
ENSLOCG00000002427	sall4	100	62.116	ENSAOCG00000023678	sall4	100	61.935	Amphiprion_ocellaris
ENSLOCG00000002427	sall4	100	61.935	ENSAPEG00000000751	sall4	100	61.754	Amphiprion_percula
ENSLOCG00000002427	sall4	100	62.782	ENSATEG00000024480	sall4	100	62.602	Anabas_testudineus
ENSLOCG00000002427	sall4	100	57.960	ENSAPLG00000006498	SALL4	100	57.937	Anas_platyrhynchos
ENSLOCG00000002427	sall4	100	56.537	ENSACAG00000012748	SALL4	100	56.353	Anolis_carolinensis
ENSLOCG00000002427	sall4	100	47.391	ENSANAG00000023352	SALL4	100	47.688	Aotus_nancymaae
ENSLOCG00000002427	sall4	100	61.836	ENSACLG00000017851	sall4	100	61.656	Astatotilapia_calliptera
ENSLOCG00000002427	sall4	99	67.325	ENSAMXG00000001254	sall4	99	67.008	Astyanax_mexicanus
ENSLOCG00000002427	sall4	100	45.078	ENSBTAG00000003101	SALL4	100	45.611	Bos_taurus
ENSLOCG00000002427	sall4	83	50.107	ENSCJAG00000000591	SALL4	99	50.107	Callithrix_jacchus
ENSLOCG00000002427	sall4	100	47.246	ENSCAFG00000011738	-	100	47.615	Canis_familiaris
ENSLOCG00000002427	sall4	100	47.690	ENSCAFG00020021870	SALL4	100	48.067	Canis_lupus_dingo
ENSLOCG00000002427	sall4	100	45.000	ENSCHIG00000026270	SALL4	100	45.779	Capra_hircus
ENSLOCG00000002427	sall4	100	47.028	ENSTSYG00000007359	SALL4	100	57.692	Carlito_syrichta
ENSLOCG00000002427	sall4	99	47.112	ENSCAPG00000012135	SALL4	98	46.835	Cavia_aperea
ENSLOCG00000002427	sall4	100	44.338	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSLOCG00000002427	sall4	100	48.258	ENSCATG00000030757	SALL4	100	48.237	Cercocebus_atys
ENSLOCG00000002427	sall4	100	47.336	ENSCLAG00000010479	SALL4	100	47.084	Chinchilla_lanigera
ENSLOCG00000002427	sall4	100	48.202	ENSCSAG00000015269	SALL4	100	48.072	Chlorocebus_sabaeus
ENSLOCG00000002427	sall4	99	58.771	ENSCPBG00000014995	SALL4	99	58.748	Chrysemys_picta_bellii
ENSLOCG00000002427	sall4	100	47.623	ENSCANG00000036463	SALL4	100	47.893	Colobus_angolensis_palliatus
ENSLOCG00000002427	sall4	100	45.161	ENSCGRG00001019569	Sall4	100	45.570	Cricetulus_griseus_chok1gshd
ENSLOCG00000002427	sall4	100	44.900	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSLOCG00000002427	sall4	100	60.669	ENSCSEG00000014604	sall4	100	60.936	Cynoglossus_semilaevis
ENSLOCG00000002427	sall4	100	61.982	ENSCVAG00000010815	sall4	100	62.072	Cyprinodon_variegatus
ENSLOCG00000002427	sall4	99	65.291	ENSDARG00000044485	sall4	99	65.523	Danio_rerio
ENSLOCG00000002427	sall4	100	47.059	ENSDNOG00000040633	SALL4	100	47.845	Dasypus_novemcinctus
ENSLOCG00000002427	sall4	100	44.987	ENSDORG00000012841	Sall4	100	74.684	Dipodomys_ordii
ENSLOCG00000002427	sall4	66	60.000	ENSETEG00000012475	-	56	60.000	Echinops_telfairi
ENSLOCG00000002427	sall4	100	48.540	ENSECAG00000018533	SALL4	100	48.368	Equus_caballus
ENSLOCG00000002427	sall4	100	46.087	ENSEEUG00000003649	SALL4	99	46.280	Erinaceus_europaeus
ENSLOCG00000002427	sall4	100	64.742	ENSELUG00000005696	sall4	100	64.885	Esox_lucius
ENSLOCG00000002427	sall4	100	47.664	ENSFCAG00000002822	SALL4	97	55.328	Felis_catus
ENSLOCG00000002427	sall4	100	56.635	ENSFALG00000013149	SALL4	100	56.299	Ficedula_albicollis
ENSLOCG00000002427	sall4	100	46.972	ENSFDAG00000017812	SALL4	100	47.038	Fukomys_damarensis
ENSLOCG00000002427	sall4	100	62.116	ENSFHEG00000014187	sall4	100	61.797	Fundulus_heteroclitus
ENSLOCG00000002427	sall4	100	61.504	ENSGMOG00000003822	sall4	100	61.252	Gadus_morhua
ENSLOCG00000002427	sall4	100	57.068	ENSGALG00000041365	SALL4	100	57.496	Gallus_gallus
ENSLOCG00000002427	sall4	100	61.538	ENSGAFG00000019925	sall4	100	61.343	Gambusia_affinis
ENSLOCG00000002427	sall4	100	60.234	ENSGACG00000011124	sall4	100	59.857	Gasterosteus_aculeatus
ENSLOCG00000002427	sall4	100	58.813	ENSGAGG00000002297	SALL4	100	58.547	Gopherus_agassizii
ENSLOCG00000002427	sall4	100	47.976	ENSGGOG00000001832	SALL4	100	48.017	Gorilla_gorilla
ENSLOCG00000002427	sall4	100	61.746	ENSHBUG00000007327	sall4	100	61.566	Haplochromis_burtoni
ENSLOCG00000002427	sall4	97	47.091	ENSHGLG00000009043	SALL4	95	47.184	Heterocephalus_glaber_female
ENSLOCG00000002427	sall4	97	47.091	ENSHGLG00100002722	SALL4	95	47.184	Heterocephalus_glaber_male
ENSLOCG00000002427	sall4	100	61.151	ENSHCOG00000008519	sall4	100	61.156	Hippocampus_comes
ENSLOCG00000002427	sall4	99	66.213	ENSIPUG00000019170	sall4	99	66.303	Ictalurus_punctatus
ENSLOCG00000002427	sall4	72	59.615	ENSSTOG00000025002	SALL4	100	85.915	Ictidomys_tridecemlineatus
ENSLOCG00000002427	sall4	100	47.150	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSLOCG00000002427	sall4	100	62.873	ENSKMAG00000002501	sall4	100	62.727	Kryptolebias_marmoratus
ENSLOCG00000002427	sall4	100	61.664	ENSLBEG00000019951	sall4	100	61.490	Labrus_bergylta
ENSLOCG00000002427	sall4	96	54.689	ENSLACG00000013898	SALL4	99	62.827	Latimeria_chalumnae
ENSLOCG00000002427	sall4	100	49.042	ENSLAFG00000004309	SALL4	100	49.042	Loxodonta_africana
ENSLOCG00000002427	sall4	100	47.710	ENSMFAG00000027169	SALL4	100	48.145	Macaca_fascicularis
ENSLOCG00000002427	sall4	87	49.185	ENSMMUG00000003870	SALL4	100	59.615	Macaca_mulatta
ENSLOCG00000002427	sall4	87	49.185	ENSMNEG00000035995	SALL4	86	59.615	Macaca_nemestrina
ENSLOCG00000002427	sall4	100	47.890	ENSMLEG00000030467	SALL4	100	48.237	Mandrillus_leucophaeus
ENSLOCG00000002427	sall4	100	62.075	ENSMAMG00000005223	sall4	100	61.491	Mastacembelus_armatus
ENSLOCG00000002427	sall4	100	61.836	ENSMZEG00005023418	sall4	100	61.656	Maylandia_zebra
ENSLOCG00000002427	sall4	75	63.462	ENSMGAG00000009344	SALL4	100	63.462	Meleagris_gallopavo
ENSLOCG00000002427	sall4	100	45.400	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSLOCG00000002427	sall4	100	49.037	ENSMICG00000000027	SALL4	100	49.124	Microcebus_murinus
ENSLOCG00000002427	sall4	100	45.909	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSLOCG00000002427	sall4	100	62.094	ENSMMOG00000014929	sall4	100	62.094	Mola_mola
ENSLOCG00000002427	sall4	100	52.622	ENSMODG00000016387	SALL4	97	52.710	Monodelphis_domestica
ENSLOCG00000002427	sall4	100	63.177	ENSMALG00000018709	sall4	100	62.816	Monopterus_albus
ENSLOCG00000002427	sall4	100	45.214	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSLOCG00000002427	sall4	100	44.881	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSLOCG00000002427	sall4	100	44.670	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSLOCG00000002427	sall4	100	44.795	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSLOCG00000002427	sall4	100	46.827	ENSMPUG00000017543	SALL4	96	46.821	Mustela_putorius_furo
ENSLOCG00000002427	sall4	99	36.786	ENSMLUG00000028073	-	99	36.518	Myotis_lucifugus
ENSLOCG00000002427	sall4	100	45.382	ENSMLUG00000008405	-	100	45.293	Myotis_lucifugus
ENSLOCG00000002427	sall4	97	47.235	ENSMLUG00000007060	-	98	47.144	Myotis_lucifugus
ENSLOCG00000002427	sall4	100	46.853	ENSNGAG00000017833	Sall4	91	59.615	Nannospalax_galili
ENSLOCG00000002427	sall4	100	61.476	ENSNBRG00000001829	sall4	100	61.296	Neolamprologus_brichardi
ENSLOCG00000002427	sall4	100	47.414	ENSNLEG00000007013	SALL4	100	47.879	Nomascus_leucogenys
ENSLOCG00000002427	sall4	85	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSLOCG00000002427	sall4	100	47.879	ENSOPRG00000011640	SALL4	100	47.965	Ochotona_princeps
ENSLOCG00000002427	sall4	100	62.162	ENSONIG00000016557	sall4	100	62.310	Oreochromis_niloticus
ENSLOCG00000002427	sall4	100	57.662	ENSOANG00000008667	SALL4	97	58.245	Ornithorhynchus_anatinus
ENSLOCG00000002427	sall4	97	48.558	ENSOCUG00000011797	SALL4	98	48.651	Oryctolagus_cuniculus
ENSLOCG00000002427	sall4	100	62.060	ENSORLG00000016130	sall4	100	61.818	Oryzias_latipes
ENSLOCG00000002427	sall4	100	62.262	ENSORLG00020007339	sall4	100	62.022	Oryzias_latipes_hni
ENSLOCG00000002427	sall4	100	62.172	ENSORLG00015002265	sall4	100	61.931	Oryzias_latipes_hsok
ENSLOCG00000002427	sall4	100	61.879	ENSOMEG00000017344	sall4	100	61.692	Oryzias_melastigma
ENSLOCG00000002427	sall4	97	50.276	ENSOGAG00000013799	SALL4	99	50.184	Otolemur_garnettii
ENSLOCG00000002427	sall4	100	43.761	ENSOARG00000014570	SALL4	100	44.357	Ovis_aries
ENSLOCG00000002427	sall4	100	48.049	ENSPPAG00000038064	SALL4	100	48.049	Pan_paniscus
ENSLOCG00000002427	sall4	100	47.660	ENSPPRG00000008677	SALL4	97	55.738	Panthera_pardus
ENSLOCG00000002427	sall4	100	47.690	ENSPTRG00000013631	SALL4	100	47.962	Pan_troglodytes
ENSLOCG00000002427	sall4	87	49.185	ENSPANG00000021792	SALL4	86	59.615	Papio_anubis
ENSLOCG00000002427	sall4	100	69.518	ENSPKIG00000007074	sall4	100	69.427	Paramormyrops_kingsleyae
ENSLOCG00000002427	sall4	99	58.886	ENSPSIG00000009066	SALL4	100	58.642	Pelodiscus_sinensis
ENSLOCG00000002427	sall4	100	57.741	ENSPMGG00000022551	sall4	100	57.104	Periophthalmus_magnuspinnatus
ENSLOCG00000002427	sall4	100	45.704	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSLOCG00000002427	sall4	100	54.704	ENSPCIG00000022838	SALL4	97	54.617	Phascolarctos_cinereus
ENSLOCG00000002427	sall4	100	61.267	ENSPFOG00000001442	sall4	100	61.071	Poecilia_formosa
ENSLOCG00000002427	sall4	100	61.176	ENSPLAG00000008760	sall4	100	60.980	Poecilia_latipinna
ENSLOCG00000002427	sall4	100	61.176	ENSPMEG00000008497	sall4	100	60.980	Poecilia_mexicana
ENSLOCG00000002427	sall4	100	61.357	ENSPREG00000021140	sall4	100	61.071	Poecilia_reticulata
ENSLOCG00000002427	sall4	100	46.972	ENSPPYG00000011138	SALL4	100	46.962	Pongo_abelii
ENSLOCG00000002427	sall4	100	45.228	ENSPCAG00000004726	SALL4	99	45.439	Procavia_capensis
ENSLOCG00000002427	sall4	100	48.183	ENSPCOG00000016321	SALL4	100	48.356	Propithecus_coquereli
ENSLOCG00000002427	sall4	94	47.711	ENSPVAG00000002075	SALL4	94	47.802	Pteropus_vampyrus
ENSLOCG00000002427	sall4	100	61.532	ENSPNYG00000021738	sall4	100	61.351	Pundamilia_nyererei
ENSLOCG00000002427	sall4	99	66.757	ENSPNAG00000020929	sall4	99	65.732	Pygocentrus_nattereri
ENSLOCG00000002427	sall4	100	45.904	ENSRNOG00000050035	Sall4	83	63.462	Rattus_norvegicus
ENSLOCG00000002427	sall4	100	48.219	ENSRBIG00000039876	SALL4	100	48.174	Rhinopithecus_bieti
ENSLOCG00000002427	sall4	100	47.852	ENSRROG00000036585	SALL4	100	47.807	Rhinopithecus_roxellana
ENSLOCG00000002427	sall4	100	48.329	ENSSBOG00000030011	SALL4	100	48.158	Saimiri_boliviensis_boliviensis
ENSLOCG00000002427	sall4	95	71.000	ENSSHAG00000018013	SALL4	90	71.000	Sarcophilus_harrisii
ENSLOCG00000002427	sall4	100	67.607	ENSSFOG00015021075	sall4	100	67.059	Scleropages_formosus
ENSLOCG00000002427	sall4	100	62.443	ENSSMAG00000019218	sall4	99	62.140	Scophthalmus_maximus
ENSLOCG00000002427	sall4	100	64.706	ENSSDUG00000004657	sall4	100	64.331	Seriola_dumerili
ENSLOCG00000002427	sall4	100	64.525	ENSSLDG00000004973	sall4	100	64.253	Seriola_lalandi_dorsalis
ENSLOCG00000002427	sall4	100	62.138	ENSSPAG00000001978	sall4	100	62.591	Stegastes_partitus
ENSLOCG00000002427	sall4	100	48.164	ENSSSCG00000007479	SALL4	100	47.990	Sus_scrofa
ENSLOCG00000002427	sall4	100	62.116	ENSTRUG00000007410	sall4	100	62.116	Takifugu_rubripes
ENSLOCG00000002427	sall4	100	61.866	ENSTNIG00000012460	sall4	100	62.500	Tetraodon_nigroviridis
ENSLOCG00000002427	sall4	97	46.076	ENSTTRG00000007753	SALL4	99	45.662	Tursiops_truncatus
ENSLOCG00000002427	sall4	100	47.309	ENSUAMG00000010113	SALL4	100	47.483	Ursus_americanus
ENSLOCG00000002427	sall4	97	47.680	ENSUMAG00000024274	SALL4	98	47.589	Ursus_maritimus
ENSLOCG00000002427	sall4	100	55.416	ENSXETG00000012326	sall4	100	55.287	Xenopus_tropicalis
ENSLOCG00000002427	sall4	100	55.957	ENSXCOG00000015467	sall4	100	55.747	Xiphophorus_couchianus
ENSLOCG00000002427	sall4	100	56.522	ENSXMAG00000012692	sall4	100	56.403	Xiphophorus_maculatus