EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002560 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpc
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3794 bases
Position: chrLG5:2903794-2907587
Accession: 102697803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003007	RRM_1	PF00076.22	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003013	-	873	XM_006630195	ENSLOCP00000003007	288 (aa)	XP_006630258	W5M3P9

Gene Model

Click here to download ENSLOCG00000002560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002560	hnrnpc	73	52.995	ENSLOCG00000012787	ralyl	72	53.211
ENSLOCG00000002560	hnrnpc	97	38.811	ENSLOCG00000007219	raly	75	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002560	hnrnpc	84	49.393	ENSG00000184672	RALYL	99	71.429	Homo_sapiens
ENSLOCG00000002560	hnrnpc	88	71.484	ENSAPOG00000006963	hnrnpc	85	71.111	Acanthochromis_polyacanthus
ENSLOCG00000002560	hnrnpc	89	70.611	ENSACIG00000000270	-	86	72.075	Amphilophus_citrinellus
ENSLOCG00000002560	hnrnpc	89	71.103	ENSACIG00000016568	-	83	71.863	Amphilophus_citrinellus
ENSLOCG00000002560	hnrnpc	88	69.112	ENSAOCG00000021616	-	82	68.657	Amphiprion_ocellaris
ENSLOCG00000002560	hnrnpc	88	71.094	ENSAOCG00000003896	-	85	70.741	Amphiprion_ocellaris
ENSLOCG00000002560	hnrnpc	89	69.202	ENSAPEG00000019962	-	84	69.030	Amphiprion_percula
ENSLOCG00000002560	hnrnpc	88	71.094	ENSAPEG00000001489	-	85	70.741	Amphiprion_percula
ENSLOCG00000002560	hnrnpc	89	71.538	ENSATEG00000011734	-	85	72.243	Anabas_testudineus
ENSLOCG00000002560	hnrnpc	91	70.111	ENSATEG00000018006	-	82	71.111	Anabas_testudineus
ENSLOCG00000002560	hnrnpc	93	44.369	ENSAPLG00000015574	RALYL	77	51.304	Anas_platyrhynchos
ENSLOCG00000002560	hnrnpc	93	45.105	ENSACAG00000028464	RALYL	76	50.435	Anolis_carolinensis
ENSLOCG00000002560	hnrnpc	84	49.194	ENSANAG00000023383	RALYL	75	52.036	Aotus_nancymaae
ENSLOCG00000002560	hnrnpc	88	70.817	ENSACLG00000013636	-	87	69.403	Astatotilapia_calliptera
ENSLOCG00000002560	hnrnpc	91	71.111	ENSACLG00000005707	-	89	70.522	Astatotilapia_calliptera
ENSLOCG00000002560	hnrnpc	88	70.817	ENSACLG00000000995	-	85	70.849	Astatotilapia_calliptera
ENSLOCG00000002560	hnrnpc	73	66.512	ENSAMXG00000042946	hnrnpc	95	66.321	Astyanax_mexicanus
ENSLOCG00000002560	hnrnpc	91	70.229	ENSAMXG00000034915	zgc:55733	89	67.424	Astyanax_mexicanus
ENSLOCG00000002560	hnrnpc	92	46.931	ENSCJAG00000000402	RALYL	75	52.036	Callithrix_jacchus
ENSLOCG00000002560	hnrnpc	73	52.000	ENSCPOG00000012314	RALYL	76	51.092	Cavia_porcellus
ENSLOCG00000002560	hnrnpc	73	53.704	ENSCCAG00000025003	RALYL	87	67.778	Cebus_capucinus
ENSLOCG00000002560	hnrnpc	84	49.393	ENSCATG00000042145	RALYL	75	52.036	Cercocebus_atys
ENSLOCG00000002560	hnrnpc	84	48.249	ENSCLAG00000005228	RALYL	76	51.092	Chinchilla_lanigera
ENSLOCG00000002560	hnrnpc	74	48.684	ENSCHOG00000013228	RALYL	75	46.983	Choloepus_hoffmanni
ENSLOCG00000002560	hnrnpc	84	49.393	ENSCANG00000039144	RALYL	75	52.036	Colobus_angolensis_palliatus
ENSLOCG00000002560	hnrnpc	73	51.327	ENSCGRG00001009241	Ralyl	76	50.435	Cricetulus_griseus_chok1gshd
ENSLOCG00000002560	hnrnpc	82	68.313	ENSCSEG00000021349	-	70	70.536	Cynoglossus_semilaevis
ENSLOCG00000002560	hnrnpc	77	65.198	ENSCSEG00000019769	-	72	65.899	Cynoglossus_semilaevis
ENSLOCG00000002560	hnrnpc	88	69.767	ENSCVAG00000016981	-	82	69.708	Cyprinodon_variegatus
ENSLOCG00000002560	hnrnpc	95	60.000	ENSCVAG00000002797	-	86	58.175	Cyprinodon_variegatus
ENSLOCG00000002560	hnrnpc	91	74.340	ENSDARG00000103845	zgc:55733	83	76.889	Danio_rerio
ENSLOCG00000002560	hnrnpc	82	72.614	ENSDARG00000053810	hnrnpc	80	68.199	Danio_rerio
ENSLOCG00000002560	hnrnpc	84	48.062	ENSDORG00000003721	Ralyl	76	51.304	Dipodomys_ordii
ENSLOCG00000002560	hnrnpc	59	52.542	ENSETEG00000014028	RALYL	84	53.846	Echinops_telfairi
ENSLOCG00000002560	hnrnpc	79	40.496	ENSEBUG00000012363	hnrnpc	64	43.304	Eptatretus_burgeri
ENSLOCG00000002560	hnrnpc	84	43.373	ENSEBUG00000006049	RALYL	74	45.327	Eptatretus_burgeri
ENSLOCG00000002560	hnrnpc	84	48.062	ENSEEUG00000007202	RALYL	78	49.576	Erinaceus_europaeus
ENSLOCG00000002560	hnrnpc	88	68.498	ENSELUG00000007714	-	91	70.357	Esox_lucius
ENSLOCG00000002560	hnrnpc	91	75.185	ENSELUG00000004132	-	90	71.269	Esox_lucius
ENSLOCG00000002560	hnrnpc	93	44.369	ENSFALG00000008647	RALYL	97	52.273	Ficedula_albicollis
ENSLOCG00000002560	hnrnpc	93	72.364	ENSFHEG00000003605	-	87	69.259	Fundulus_heteroclitus
ENSLOCG00000002560	hnrnpc	89	68.148	ENSFHEG00000007278	-	84	68.231	Fundulus_heteroclitus
ENSLOCG00000002560	hnrnpc	84	48.594	ENSGALG00000036938	RALYL	76	50.870	Gallus_gallus
ENSLOCG00000002560	hnrnpc	91	68.284	ENSGAFG00000020992	-	85	69.288	Gambusia_affinis
ENSLOCG00000002560	hnrnpc	93	69.091	ENSGAFG00000020486	-	86	66.667	Gambusia_affinis
ENSLOCG00000002560	hnrnpc	76	63.229	ENSGACG00000018932	-	85	62.844	Gasterosteus_aculeatus
ENSLOCG00000002560	hnrnpc	92	67.883	ENSGACG00000017772	-	97	69.884	Gasterosteus_aculeatus
ENSLOCG00000002560	hnrnpc	84	49.393	ENSGGOG00000000841	RALYL	75	52.036	Gorilla_gorilla
ENSLOCG00000002560	hnrnpc	88	71.206	ENSHBUG00000018342	-	85	71.218	Haplochromis_burtoni
ENSLOCG00000002560	hnrnpc	91	71.481	ENSHBUG00000010527	-	83	70.896	Haplochromis_burtoni
ENSLOCG00000002560	hnrnpc	84	47.860	ENSHGLG00000004866	RALYL	76	50.655	Heterocephalus_glaber_female
ENSLOCG00000002560	hnrnpc	84	47.860	ENSHGLG00100017480	RALYL	76	50.655	Heterocephalus_glaber_male
ENSLOCG00000002560	hnrnpc	89	66.787	ENSHCOG00000012333	hnrnpc	90	66.429	Hippocampus_comes
ENSLOCG00000002560	hnrnpc	91	71.483	ENSIPUG00000008666	zgc:55733	92	72.477	Ictalurus_punctatus
ENSLOCG00000002560	hnrnpc	89	71.103	ENSIPUG00000011271	hnrnpc	96	72.072	Ictalurus_punctatus
ENSLOCG00000002560	hnrnpc	73	51.327	ENSSTOG00000012583	RALYL	77	50.870	Ictidomys_tridecemlineatus
ENSLOCG00000002560	hnrnpc	88	68.726	ENSKMAG00000018265	-	82	69.517	Kryptolebias_marmoratus
ENSLOCG00000002560	hnrnpc	94	71.014	ENSKMAG00000011170	-	84	70.037	Kryptolebias_marmoratus
ENSLOCG00000002560	hnrnpc	93	71.429	ENSLBEG00000006979	-	85	69.960	Labrus_bergylta
ENSLOCG00000002560	hnrnpc	90	70.301	ENSLBEG00000006193	-	83	70.522	Labrus_bergylta
ENSLOCG00000002560	hnrnpc	95	66.202	ENSLBEG00000024418	-	86	65.789	Labrus_bergylta
ENSLOCG00000002560	hnrnpc	84	49.393	ENSMNEG00000033288	RALYL	75	52.036	Macaca_nemestrina
ENSLOCG00000002560	hnrnpc	84	49.393	ENSMLEG00000038284	RALYL	75	52.036	Mandrillus_leucophaeus
ENSLOCG00000002560	hnrnpc	89	72.481	ENSMAMG00000012236	-	85	71.747	Mastacembelus_armatus
ENSLOCG00000002560	hnrnpc	91	69.004	ENSMAMG00000008033	-	86	69.732	Mastacembelus_armatus
ENSLOCG00000002560	hnrnpc	91	71.111	ENSMZEG00005024249	-	83	70.522	Maylandia_zebra
ENSLOCG00000002560	hnrnpc	89	70.566	ENSMZEG00005020460	-	88	67.925	Maylandia_zebra
ENSLOCG00000002560	hnrnpc	73	51.327	ENSMAUG00000015149	Ralyl	76	50.435	Mesocricetus_auratus
ENSLOCG00000002560	hnrnpc	88	47.388	ENSMICG00000005558	RALYL	82	75.309	Microcebus_murinus
ENSLOCG00000002560	hnrnpc	84	47.674	ENSMOCG00000017371	Ralyl	76	50.435	Microtus_ochrogaster
ENSLOCG00000002560	hnrnpc	86	69.020	ENSMMOG00000019520	-	93	66.667	Mola_mola
ENSLOCG00000002560	hnrnpc	91	70.896	ENSMMOG00000021465	-	92	70.149	Mola_mola
ENSLOCG00000002560	hnrnpc	89	62.308	ENSMALG00000007520	-	85	64.093	Monopterus_albus
ENSLOCG00000002560	hnrnpc	91	70.149	ENSMALG00000014623	-	83	68.421	Monopterus_albus
ENSLOCG00000002560	hnrnpc	73	50.885	ENSMUSG00000039717	Ralyl	99	70.238	Mus_musculus
ENSLOCG00000002560	hnrnpc	84	49.225	ENSMPUG00000010724	RALYL	76	51.515	Mustela_putorius_furo
ENSLOCG00000002560	hnrnpc	84	47.674	ENSNGAG00000013375	Ralyl	76	50.435	Nannospalax_galili
ENSLOCG00000002560	hnrnpc	91	71.481	ENSNBRG00000015676	-	83	70.896	Neolamprologus_brichardi
ENSLOCG00000002560	hnrnpc	89	70.881	ENSNBRG00000004912	-	91	72.273	Neolamprologus_brichardi
ENSLOCG00000002560	hnrnpc	84	49.393	ENSNLEG00000002702	RALYL	72	52.036	Nomascus_leucogenys
ENSLOCG00000002560	hnrnpc	63	45.641	ENSOPRG00000013650	-	98	42.714	Ochotona_princeps
ENSLOCG00000002560	hnrnpc	84	48.249	ENSODEG00000001012	RALYL	76	50.655	Octodon_degus
ENSLOCG00000002560	hnrnpc	91	71.481	ENSONIG00000018350	-	83	70.896	Oreochromis_niloticus
ENSLOCG00000002560	hnrnpc	88	71.984	ENSONIG00000007859	-	93	70.652	Oreochromis_niloticus
ENSLOCG00000002560	hnrnpc	93	62.681	ENSORLG00000009999	-	83	61.069	Oryzias_latipes
ENSLOCG00000002560	hnrnpc	88	70.881	ENSORLG00000003144	-	82	71.218	Oryzias_latipes
ENSLOCG00000002560	hnrnpc	93	62.681	ENSORLG00020018228	hnrnpc	83	61.069	Oryzias_latipes_hni
ENSLOCG00000002560	hnrnpc	93	62.681	ENSORLG00015019755	-	83	61.069	Oryzias_latipes_hsok
ENSLOCG00000002560	hnrnpc	88	70.881	ENSORLG00015009460	-	81	71.218	Oryzias_latipes_hsok
ENSLOCG00000002560	hnrnpc	88	71.318	ENSOMEG00000022665	-	82	71.642	Oryzias_melastigma
ENSLOCG00000002560	hnrnpc	88	63.707	ENSOMEG00000020488	-	86	61.993	Oryzias_melastigma
ENSLOCG00000002560	hnrnpc	84	49.393	ENSPPAG00000038705	RALYL	75	52.036	Pan_paniscus
ENSLOCG00000002560	hnrnpc	84	50.400	ENSPPRG00000018612	RALYL	75	52.915	Panthera_pardus
ENSLOCG00000002560	hnrnpc	84	50.400	ENSPTIG00000020331	RALYL	75	52.915	Panthera_tigris_altaica
ENSLOCG00000002560	hnrnpc	84	49.393	ENSPTRG00000020381	RALYL	75	52.036	Pan_troglodytes
ENSLOCG00000002560	hnrnpc	84	49.393	ENSPANG00000029305	RALYL	75	52.036	Papio_anubis
ENSLOCG00000002560	hnrnpc	91	73.358	ENSPKIG00000008592	-	84	74.453	Paramormyrops_kingsleyae
ENSLOCG00000002560	hnrnpc	92	69.286	ENSPKIG00000022837	-	84	73.091	Paramormyrops_kingsleyae
ENSLOCG00000002560	hnrnpc	93	44.369	ENSPSIG00000011135	RALYL	76	50.870	Pelodiscus_sinensis
ENSLOCG00000002560	hnrnpc	76	76.682	ENSPMGG00000013144	-	80	72.558	Periophthalmus_magnuspinnatus
ENSLOCG00000002560	hnrnpc	86	62.302	ENSPMGG00000017774	-	90	66.047	Periophthalmus_magnuspinnatus
ENSLOCG00000002560	hnrnpc	73	51.327	ENSPEMG00000016447	Ralyl	76	50.435	Peromyscus_maniculatus_bairdii
ENSLOCG00000002560	hnrnpc	74	50.661	ENSPMAG00000002407	RALYL	97	47.162	Petromyzon_marinus
ENSLOCG00000002560	hnrnpc	88	69.380	ENSPFOG00000002643	-	83	69.118	Poecilia_formosa
ENSLOCG00000002560	hnrnpc	93	68.613	ENSPFOG00000001583	-	86	67.407	Poecilia_formosa
ENSLOCG00000002560	hnrnpc	93	68.248	ENSPLAG00000015305	-	86	66.300	Poecilia_latipinna
ENSLOCG00000002560	hnrnpc	88	69.380	ENSPLAG00000000061	-	81	70.149	Poecilia_latipinna
ENSLOCG00000002560	hnrnpc	93	70.909	ENSPMEG00000004802	-	85	67.897	Poecilia_mexicana
ENSLOCG00000002560	hnrnpc	88	68.992	ENSPMEG00000016524	-	81	70.522	Poecilia_mexicana
ENSLOCG00000002560	hnrnpc	88	68.217	ENSPREG00000007928	-	86	67.399	Poecilia_reticulata
ENSLOCG00000002560	hnrnpc	88	68.992	ENSPREG00000001852	-	88	67.910	Poecilia_reticulata
ENSLOCG00000002560	hnrnpc	63	74.684	ENSPPYG00000018710	-	54	71.429	Pongo_abelii
ENSLOCG00000002560	hnrnpc	73	51.111	ENSPVAG00000010821	RALYL	76	50.870	Pteropus_vampyrus
ENSLOCG00000002560	hnrnpc	89	70.115	ENSPNYG00000020293	-	86	71.364	Pundamilia_nyererei
ENSLOCG00000002560	hnrnpc	91	71.481	ENSPNYG00000003747	-	89	70.896	Pundamilia_nyererei
ENSLOCG00000002560	hnrnpc	91	66.182	ENSPNAG00000019200	zgc:55733	74	71.368	Pygocentrus_nattereri
ENSLOCG00000002560	hnrnpc	84	72.581	ENSPNAG00000015686	hnrnpc	88	69.925	Pygocentrus_nattereri
ENSLOCG00000002560	hnrnpc	84	49.393	ENSRROG00000023925	RALYL	81	75.000	Rhinopithecus_roxellana
ENSLOCG00000002560	hnrnpc	89	72.491	ENSSFOG00015012924	-	82	95.062	Scleropages_formosus
ENSLOCG00000002560	hnrnpc	96	72.222	ENSSFOG00015012015	-	81	77.626	Scleropages_formosus
ENSLOCG00000002560	hnrnpc	89	70.455	ENSSMAG00000011147	-	81	72.388	Scophthalmus_maximus
ENSLOCG00000002560	hnrnpc	85	69.478	ENSSMAG00000013592	-	83	67.557	Scophthalmus_maximus
ENSLOCG00000002560	hnrnpc	93	73.529	ENSSDUG00000001723	-	85	71.481	Seriola_dumerili
ENSLOCG00000002560	hnrnpc	91	72.285	ENSSDUG00000006730	-	83	71.805	Seriola_dumerili
ENSLOCG00000002560	hnrnpc	92	74.721	ENSSLDG00000007454	-	86	71.852	Seriola_lalandi_dorsalis
ENSLOCG00000002560	hnrnpc	91	72.285	ENSSLDG00000007474	-	91	71.805	Seriola_lalandi_dorsalis
ENSLOCG00000002560	hnrnpc	91	71.004	ENSSPAG00000013996	-	83	72.015	Stegastes_partitus
ENSLOCG00000002560	hnrnpc	92	73.606	ENSSPAG00000023204	-	85	73.333	Stegastes_partitus
ENSLOCG00000002560	hnrnpc	93	45.051	ENSTGUG00000011689	RALYL	85	47.328	Taeniopygia_guttata
ENSLOCG00000002560	hnrnpc	90	68.421	ENSTRUG00000020158	-	84	69.084	Takifugu_rubripes
ENSLOCG00000002560	hnrnpc	87	64.286	ENSTNIG00000000334	-	94	62.891	Tetraodon_nigroviridis
ENSLOCG00000002560	hnrnpc	89	66.421	ENSTNIG00000007427	-	84	65.672	Tetraodon_nigroviridis
ENSLOCG00000002560	hnrnpc	84	45.490	ENSTBEG00000005551	RALYL	86	48.879	Tupaia_belangeri
ENSLOCG00000002560	hnrnpc	73	52.489	ENSTTRG00000015762	RALYL	76	52.000	Tursiops_truncatus
ENSLOCG00000002560	hnrnpc	84	47.791	ENSVPAG00000008501	RALYL	76	51.802	Vicugna_pacos
ENSLOCG00000002560	hnrnpc	93	63.177	ENSXCOG00000006552	-	82	62.214	Xiphophorus_couchianus
ENSLOCG00000002560	hnrnpc	56	76.220	ENSXCOG00000019434	-	69	76.220	Xiphophorus_couchianus
ENSLOCG00000002560	hnrnpc	88	69.112	ENSXMAG00000022849	-	85	70.149	Xiphophorus_maculatus
ENSLOCG00000002560	hnrnpc	93	70.182	ENSXMAG00000009333	-	86	67.778	Xiphophorus_maculatus