EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 892 bases
Position: chrLG18:6013538-6014429
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003087	zf-CCHC	PF00098.23	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003093	-	531	-	ENSLOCP00000003087	177 (aa)	-	W5M3X9

Gene Model

Click here to download ENSLOCG00000002624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002624	-	85	44.371	ENSLOCG00000000361	-	94	44.371
ENSLOCG00000002624	-	89	78.481	ENSLOCG00000017623	-	63	78.481
ENSLOCG00000002624	-	79	48.921	ENSLOCG00000017641	-	97	48.921
ENSLOCG00000002624	-	84	38.926	ENSLOCG00000017694	-	86	38.926
ENSLOCG00000002624	-	82	47.260	ENSLOCG00000012680	-	90	47.260
ENSLOCG00000002624	-	76	54.762	ENSLOCG00000000602	-	93	54.762
ENSLOCG00000002624	-	79	54.676	ENSLOCG00000017327	-	95	54.676
ENSLOCG00000002624	-	79	49.640	ENSLOCG00000017328	-	81	49.640
ENSLOCG00000002624	-	77	48.175	ENSLOCG00000017824	-	98	48.175
ENSLOCG00000002624	-	82	49.315	ENSLOCG00000000297	-	94	49.315
ENSLOCG00000002624	-	78	52.174	ENSLOCG00000000320	-	77	52.174
ENSLOCG00000002624	-	79	39.568	ENSLOCG00000006695	-	80	39.568
ENSLOCG00000002624	-	50	51.136	ENSLOCG00000017666	-	86	51.136
ENSLOCG00000002624	-	82	48.630	ENSLOCG00000017303	-	77	48.630
ENSLOCG00000002624	-	82	54.110	ENSLOCG00000017302	-	84	54.110
ENSLOCG00000002624	-	79	46.763	ENSLOCG00000017305	-	95	46.763
ENSLOCG00000002624	-	77	47.445	ENSLOCG00000017974	-	71	46.763
ENSLOCG00000002624	-	79	53.782	ENSLOCG00000010606	-	95	53.782
ENSLOCG00000002624	-	82	46.207	ENSLOCG00000018355	-	85	46.207
ENSLOCG00000002624	-	84	60.403	ENSLOCG00000017530	-	87	60.403
ENSLOCG00000002624	-	82	51.724	ENSLOCG00000018075	-	74	51.724
ENSLOCG00000002624	-	82	53.425	ENSLOCG00000017639	-	81	53.425
ENSLOCG00000002624	-	72	46.094	ENSLOCG00000017867	-	74	46.094
ENSLOCG00000002624	-	78	53.097	ENSLOCG00000000632	-	78	53.097
ENSLOCG00000002624	-	77	44.118	ENSLOCG00000017501	-	82	44.118
ENSLOCG00000002624	-	79	48.921	ENSLOCG00000017503	-	77	48.921
ENSLOCG00000002624	-	92	57.055	ENSLOCG00000008338	-	88	57.055
ENSLOCG00000002624	-	82	50.685	ENSLOCG00000017670	-	81	50.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002624	-	78	33.333	ENSATEG00000004599	-	60	33.333	Anabas_testudineus
ENSLOCG00000002624	-	73	41.538	ENSACLG00000019919	-	83	41.538	Astatotilapia_calliptera
ENSLOCG00000002624	-	79	41.429	ENSACLG00000014014	-	66	41.429	Astatotilapia_calliptera
ENSLOCG00000002624	-	79	41.429	ENSACLG00000015881	-	68	41.429	Astatotilapia_calliptera
ENSLOCG00000002624	-	79	41.429	ENSACLG00000011316	-	67	41.429	Astatotilapia_calliptera
ENSLOCG00000002624	-	77	36.957	ENSELUG00000002602	-	71	36.957	Esox_lucius
ENSLOCG00000002624	-	98	39.080	ENSGACG00000000773	-	98	39.080	Gasterosteus_aculeatus
ENSLOCG00000002624	-	96	39.412	ENSGACG00000018075	-	98	39.412	Gasterosteus_aculeatus
ENSLOCG00000002624	-	79	40.000	ENSHBUG00000001589	-	72	40.000	Haplochromis_burtoni
ENSLOCG00000002624	-	86	33.553	ENSHBUG00000011697	-	69	33.553	Haplochromis_burtoni
ENSLOCG00000002624	-	64	38.053	ENSIPUG00000013198	-	52	38.053	Ictalurus_punctatus
ENSLOCG00000002624	-	82	34.932	ENSLACG00000003328	-	51	34.932	Latimeria_chalumnae
ENSLOCG00000002624	-	79	41.429	ENSMZEG00005028553	-	67	41.429	Maylandia_zebra
ENSLOCG00000002624	-	73	44.186	ENSMZEG00005028547	-	95	44.186	Maylandia_zebra
ENSLOCG00000002624	-	79	41.429	ENSMZEG00005028130	-	66	41.429	Maylandia_zebra
ENSLOCG00000002624	-	71	32.540	ENSNBRG00000022137	-	61	32.540	Neolamprologus_brichardi
ENSLOCG00000002624	-	79	37.589	ENSNBRG00000024092	-	71	37.589	Neolamprologus_brichardi
ENSLOCG00000002624	-	69	39.344	ENSPTIG00000009393	ZCCHC3	53	39.344	Panthera_tigris_altaica
ENSLOCG00000002624	-	78	36.232	ENSPKIG00000015947	-	61	36.232	Paramormyrops_kingsleyae
ENSLOCG00000002624	-	81	32.639	ENSPNYG00000002656	-	81	32.639	Pundamilia_nyererei
ENSLOCG00000002624	-	59	44.231	ENSPNAG00000007153	-	53	44.231	Pygocentrus_nattereri
ENSLOCG00000002624	-	69	31.148	ENSPNAG00000010555	-	67	31.148	Pygocentrus_nattereri
ENSLOCG00000002624	-	54	42.105	ENSPNAG00000002955	-	66	42.105	Pygocentrus_nattereri
ENSLOCG00000002624	-	88	37.419	ENSPNAG00000004865	-	80	37.419	Pygocentrus_nattereri
ENSLOCG00000002624	-	92	32.099	ENSSFOG00015015819	-	63	38.095	Scleropages_formosus
ENSLOCG00000002624	-	88	31.613	ENSSFOG00015017573	-	79	31.613	Scleropages_formosus
ENSLOCG00000002624	-	63	36.937	ENSSFOG00015016511	-	63	39.080	Scleropages_formosus
ENSLOCG00000002624	-	84	36.486	ENSSFOG00015012405	-	79	36.486	Scleropages_formosus
ENSLOCG00000002624	-	81	34.965	ENSVPAG00000011267	-	57	34.965	Vicugna_pacos
ENSLOCG00000002624	-	73	34.109	ENSXETG00000034004	-	66	34.109	Xenopus_tropicalis
ENSLOCG00000002624	-	78	36.957	ENSXETG00000030161	-	94	36.957	Xenopus_tropicalis
ENSLOCG00000002624	-	92	30.247	ENSXETG00000033341	-	55	30.247	Xenopus_tropicalis
ENSLOCG00000002624	-	73	34.109	ENSXETG00000034120	-	66	34.109	Xenopus_tropicalis
ENSLOCG00000002624	-	81	36.111	ENSXETG00000030090	-	73	36.111	Xenopus_tropicalis
ENSLOCG00000002624	-	94	32.381	ENSXETG00000032242	-	95	32.381	Xenopus_tropicalis
ENSLOCG00000002624	-	76	37.681	ENSXETG00000034305	-	84	37.681	Xenopus_tropicalis
ENSLOCG00000002624	-	92	32.515	ENSXETG00000033143	-	57	32.515	Xenopus_tropicalis
ENSLOCG00000002624	-	73	34.109	ENSXETG00000033661	-	66	34.109	Xenopus_tropicalis
ENSLOCG00000002624	-	69	35.772	ENSXETG00000033641	-	75	35.772	Xenopus_tropicalis
ENSLOCG00000002624	-	73	34.109	ENSXETG00000033566	-	66	34.109	Xenopus_tropicalis
ENSLOCG00000002624	-	72	32.812	ENSXETG00000030911	-	66	32.812	Xenopus_tropicalis
ENSLOCG00000002624	-	73	34.109	ENSXETG00000033553	-	66	34.109	Xenopus_tropicalis