EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002628 (Gene tree)
Gene ID: 102697934
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 15889 bases
Position: chrLG4:7183642-7199530
Accession: 102697934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003105	SRP72	PF08492.12	2.8e-21	1	1
ENSLOCP00000003124	SRP72	PF08492.12	2.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003131	-	2107	-	ENSLOCP00000003124	695 (aa)	-	W5M416
ENSLOCT00000003112	-	2711	XM_006629192	ENSLOCP00000003105	672 (aa)	XP_006629255	W5M3Z7

Gene Model

Click here to download ENSLOCG00000002628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002628	srp72	97	79.109	ENSG00000174780	SRP72	97	78.988	Homo_sapiens
ENSLOCG00000002628	srp72	97	72.672	ENSAPOG00000019438	srp72	97	73.231	Acanthochromis_polyacanthus
ENSLOCG00000002628	srp72	95	78.972	ENSAMEG00000008469	SRP72	98	78.995	Ailuropoda_melanoleuca
ENSLOCG00000002628	srp72	98	82.602	ENSACIG00000000488	srp72	98	82.774	Amphilophus_citrinellus
ENSLOCG00000002628	srp72	98	82.979	ENSAOCG00000011256	srp72	98	83.614	Amphiprion_ocellaris
ENSLOCG00000002628	srp72	98	83.283	ENSAPEG00000001512	srp72	98	83.461	Amphiprion_percula
ENSLOCG00000002628	srp72	92	84.903	ENSATEG00000006781	srp72	99	84.903	Anabas_testudineus
ENSLOCG00000002628	srp72	96	78.882	ENSAPLG00000008751	SRP72	96	78.760	Anas_platyrhynchos
ENSLOCG00000002628	srp72	96	77.898	ENSACAG00000002381	SRP72	96	77.134	Anolis_carolinensis
ENSLOCG00000002628	srp72	96	77.605	ENSANAG00000020836	-	96	77.605	Aotus_nancymaae
ENSLOCG00000002628	srp72	98	83.156	ENSACLG00000014617	srp72	98	83.333	Astatotilapia_calliptera
ENSLOCG00000002628	srp72	97	84.356	ENSAMXG00000004011	srp72	98	84.356	Astyanax_mexicanus
ENSLOCG00000002628	srp72	97	77.727	ENSBTAG00000010593	SRP72	97	78.067	Bos_taurus
ENSLOCG00000002628	srp72	97	78.341	ENSCJAG00000017998	SRP72	97	78.221	Callithrix_jacchus
ENSLOCG00000002628	srp72	97	78.955	ENSCAFG00000002244	SRP72	97	79.294	Canis_familiaris
ENSLOCG00000002628	srp72	97	78.955	ENSCAFG00020027338	SRP72	96	79.049	Canis_lupus_dingo
ENSLOCG00000002628	srp72	97	75.651	ENSCHIG00000021465	SRP72	97	75.994	Capra_hircus
ENSLOCG00000002628	srp72	96	79.289	ENSTSYG00000010571	-	97	78.626	Carlito_syrichta
ENSLOCG00000002628	srp72	80	61.266	ENSCAPG00000016668	SRP72	96	67.871	Cavia_aperea
ENSLOCG00000002628	srp72	97	78.955	ENSCPOG00000000218	SRP72	97	78.834	Cavia_porcellus
ENSLOCG00000002628	srp72	96	77.605	ENSCCAG00000030683	-	96	77.605	Cebus_capucinus
ENSLOCG00000002628	srp72	97	76.615	ENSCCAG00000030830	-	97	76.498	Cebus_capucinus
ENSLOCG00000002628	srp72	97	78.955	ENSCATG00000008072	SRP72	97	78.834	Cercocebus_atys
ENSLOCG00000002628	srp72	97	63.037	ENSCATG00000045359	-	95	62.923	Cercocebus_atys
ENSLOCG00000002628	srp72	97	78.341	ENSCLAG00000003571	SRP72	97	78.374	Chinchilla_lanigera
ENSLOCG00000002628	srp72	97	74.194	ENSCSAG00000005079	SRP72	97	74.426	Chlorocebus_sabaeus
ENSLOCG00000002628	srp72	86	83.333	ENSCHOG00000013240	SRP72	87	83.333	Choloepus_hoffmanni
ENSLOCG00000002628	srp72	95	79.471	ENSCPBG00000015015	SRP72	97	78.867	Chrysemys_picta_bellii
ENSLOCG00000002628	srp72	94	42.145	ENSCING00000002417	-	95	42.105	Ciona_intestinalis
ENSLOCG00000002628	srp72	93	40.958	ENSCSAVG00000011288	-	98	40.708	Ciona_savignyi
ENSLOCG00000002628	srp72	97	78.955	ENSCANG00000041709	SRP72	97	78.834	Colobus_angolensis_palliatus
ENSLOCG00000002628	srp72	94	63.071	ENSCANG00000037920	-	97	64.135	Colobus_angolensis_palliatus
ENSLOCG00000002628	srp72	97	78.187	ENSCGRG00001013548	Srp72	97	78.528	Cricetulus_griseus_chok1gshd
ENSLOCG00000002628	srp72	92	77.994	ENSCGRG00000003013	Srp72	98	77.636	Cricetulus_griseus_crigri
ENSLOCG00000002628	srp72	97	82.949	ENSCSEG00000003616	srp72	98	82.875	Cynoglossus_semilaevis
ENSLOCG00000002628	srp72	91	84.098	ENSCVAG00000001520	srp72	100	84.098	Cyprinodon_variegatus
ENSLOCG00000002628	srp72	85	84.238	ENSDARG00000014139	srp72	97	83.966	Danio_rerio
ENSLOCG00000002628	srp72	97	75.076	ENSDNOG00000039012	SRP72	81	75.266	Dasypus_novemcinctus
ENSLOCG00000002628	srp72	96	79.070	ENSDORG00000000171	Srp72	97	78.834	Dipodomys_ordii
ENSLOCG00000002628	srp72	94	42.188	FBgn0038810	Srp72	96	41.975	Drosophila_melanogaster
ENSLOCG00000002628	srp72	95	80.062	ENSETEG00000005191	SRP72	97	79.755	Echinops_telfairi
ENSLOCG00000002628	srp72	74	62.500	ENSEBUG00000003696	srp72	97	64.082	Eptatretus_burgeri
ENSLOCG00000002628	srp72	97	78.955	ENSEASG00005017747	SRP72	97	78.834	Equus_asinus_asinus
ENSLOCG00000002628	srp72	97	78.802	ENSECAG00000006920	SRP72	97	78.681	Equus_caballus
ENSLOCG00000002628	srp72	98	82.655	ENSELUG00000022415	srp72	97	84.328	Esox_lucius
ENSLOCG00000002628	srp72	96	78.825	ENSFCAG00000027600	SRP72	97	79.294	Felis_catus
ENSLOCG00000002628	srp72	95	80.530	ENSFALG00000006713	SRP72	97	79.908	Ficedula_albicollis
ENSLOCG00000002628	srp72	97	78.341	ENSFDAG00000002014	-	97	78.221	Fukomys_damarensis
ENSLOCG00000002628	srp72	98	50.762	ENSFDAG00000009793	-	96	49.772	Fukomys_damarensis
ENSLOCG00000002628	srp72	98	82.024	ENSFHEG00000017652	srp72	91	83.105	Fundulus_heteroclitus
ENSLOCG00000002628	srp72	97	78.779	ENSGMOG00000005986	srp72	97	78.931	Gadus_morhua
ENSLOCG00000002628	srp72	95	80.187	ENSGALG00000011403	SRP72	97	79.570	Gallus_gallus
ENSLOCG00000002628	srp72	98	82.879	ENSGAFG00000017762	srp72	98	83.053	Gambusia_affinis
ENSLOCG00000002628	srp72	98	81.118	ENSGACG00000016749	srp72	98	81.583	Gasterosteus_aculeatus
ENSLOCG00000002628	srp72	88	77.946	ENSGAGG00000024611	SRP72	98	77.815	Gopherus_agassizii
ENSLOCG00000002628	srp72	97	78.955	ENSGGOG00000013234	-	97	78.834	Gorilla_gorilla
ENSLOCG00000002628	srp72	98	83.308	ENSHBUG00000020723	srp72	98	83.486	Haplochromis_burtoni
ENSLOCG00000002628	srp72	89	71.240	ENSHGLG00000010633	-	99	71.850	Heterocephalus_glaber_female
ENSLOCG00000002628	srp72	96	60.433	ENSHGLG00000018597	-	96	60.555	Heterocephalus_glaber_female
ENSLOCG00000002628	srp72	97	79.109	ENSHGLG00000009791	SRP72	97	78.988	Heterocephalus_glaber_female
ENSLOCG00000002628	srp72	50	61.176	ENSHGLG00000003496	-	97	61.111	Heterocephalus_glaber_female
ENSLOCG00000002628	srp72	97	73.425	ENSHGLG00000005029	-	97	72.853	Heterocephalus_glaber_female
ENSLOCG00000002628	srp72	85	74.222	ENSHGLG00000003950	-	97	74.222	Heterocephalus_glaber_female
ENSLOCG00000002628	srp72	97	79.109	ENSHGLG00100009021	SRP72	97	78.988	Heterocephalus_glaber_male
ENSLOCG00000002628	srp72	97	58.615	ENSHGLG00100009346	-	97	59.447	Heterocephalus_glaber_male
ENSLOCG00000002628	srp72	85	73.778	ENSHGLG00100017133	-	97	73.778	Heterocephalus_glaber_male
ENSLOCG00000002628	srp72	97	73.425	ENSHGLG00100011236	-	97	72.853	Heterocephalus_glaber_male
ENSLOCG00000002628	srp72	97	81.902	ENSHCOG00000013760	srp72	98	81.902	Hippocampus_comes
ENSLOCG00000002628	srp72	98	83.105	ENSIPUG00000000210	srp72	98	83.282	Ictalurus_punctatus
ENSLOCG00000002628	srp72	97	79.109	ENSSTOG00000007305	SRP72	97	78.988	Ictidomys_tridecemlineatus
ENSLOCG00000002628	srp72	95	78.939	ENSJJAG00000018324	Srp72	97	78.321	Jaculus_jaculus
ENSLOCG00000002628	srp72	98	81.667	ENSKMAG00000003776	srp72	98	81.832	Kryptolebias_marmoratus
ENSLOCG00000002628	srp72	97	78.802	ENSLAFG00000018307	SRP72	97	78.681	Loxodonta_africana
ENSLOCG00000002628	srp72	97	78.955	ENSMFAG00000031065	SRP72	97	78.834	Macaca_fascicularis
ENSLOCG00000002628	srp72	97	63.804	ENSMFAG00000037164	-	97	64.087	Macaca_fascicularis
ENSLOCG00000002628	srp72	93	57.393	ENSMMUG00000021262	-	95	57.097	Macaca_mulatta
ENSLOCG00000002628	srp72	97	78.955	ENSMMUG00000016368	SRP72	97	78.834	Macaca_mulatta
ENSLOCG00000002628	srp72	97	78.955	ENSMNEG00000038065	-	97	78.834	Macaca_nemestrina
ENSLOCG00000002628	srp72	96	76.672	ENSMLEG00000030140	-	96	76.050	Mandrillus_leucophaeus
ENSLOCG00000002628	srp72	98	83.812	ENSMAMG00000014989	srp72	87	83.994	Mastacembelus_armatus
ENSLOCG00000002628	srp72	98	83.308	ENSMZEG00005003325	srp72	98	83.486	Maylandia_zebra
ENSLOCG00000002628	srp72	92	75.566	ENSMGAG00000008567	SRP72	97	76.991	Meleagris_gallopavo
ENSLOCG00000002628	srp72	95	78.349	ENSMAUG00000001237	Srp72	97	78.374	Mesocricetus_auratus
ENSLOCG00000002628	srp72	96	77.760	ENSMICG00000008507	-	96	77.760	Microcebus_murinus
ENSLOCG00000002628	srp72	97	78.034	ENSMOCG00000020309	Srp72	97	78.374	Microtus_ochrogaster
ENSLOCG00000002628	srp72	98	81.942	ENSMMOG00000002627	srp72	98	82.263	Mola_mola
ENSLOCG00000002628	srp72	95	75.234	ENSMODG00000020697	SRP72	97	75.000	Monodelphis_domestica
ENSLOCG00000002628	srp72	98	82.701	ENSMALG00000003747	srp72	98	83.220	Monopterus_albus
ENSLOCG00000002628	srp72	97	78.034	MGP_CAROLIEiJ_G0027323	Srp72	97	78.374	Mus_caroli
ENSLOCG00000002628	srp72	97	78.034	ENSMUSG00000036323	Srp72	97	78.374	Mus_musculus
ENSLOCG00000002628	srp72	96	78.362	MGP_PahariEiJ_G0017103	Srp72	97	78.321	Mus_pahari
ENSLOCG00000002628	srp72	97	78.034	MGP_SPRETEiJ_G0028317	Srp72	97	78.374	Mus_spretus
ENSLOCG00000002628	srp72	95	78.972	ENSMPUG00000004828	SRP72	97	78.988	Mustela_putorius_furo
ENSLOCG00000002628	srp72	95	78.227	ENSMLUG00000007344	SRP72	97	78.049	Myotis_lucifugus
ENSLOCG00000002628	srp72	97	78.779	ENSNGAG00000012595	Srp72	98	78.659	Nannospalax_galili
ENSLOCG00000002628	srp72	98	79.514	ENSNBRG00000014492	srp72	98	79.664	Neolamprologus_brichardi
ENSLOCG00000002628	srp72	97	73.846	ENSNLEG00000008806	-	97	73.620	Nomascus_leucogenys
ENSLOCG00000002628	srp72	95	67.757	ENSMEUG00000005164	SRP72	87	75.356	Notamacropus_eugenii
ENSLOCG00000002628	srp72	95	77.067	ENSOPRG00000012521	SRP72	97	76.687	Ochotona_princeps
ENSLOCG00000002628	srp72	95	76.050	ENSODEG00000012214	SRP72	97	75.804	Octodon_degus
ENSLOCG00000002628	srp72	98	83.056	ENSONIG00000001446	srp72	97	83.232	Oreochromis_niloticus
ENSLOCG00000002628	srp72	96	62.901	ENSOANG00000008562	SRP72	97	62.594	Ornithorhynchus_anatinus
ENSLOCG00000002628	srp72	97	78.615	ENSOCUG00000012226	SRP72	97	78.528	Oryctolagus_cuniculus
ENSLOCG00000002628	srp72	97	81.957	ENSORLG00000020418	srp72	98	81.902	Oryzias_latipes
ENSLOCG00000002628	srp72	97	81.651	ENSORLG00020009138	srp72	95	81.595	Oryzias_latipes_hni
ENSLOCG00000002628	srp72	97	81.346	ENSORLG00015018251	srp72	98	81.288	Oryzias_latipes_hsok
ENSLOCG00000002628	srp72	99	80.510	ENSOMEG00000022008	srp72	98	82.055	Oryzias_melastigma
ENSLOCG00000002628	srp72	97	78.495	ENSOGAG00000003578	SRP72	97	78.528	Otolemur_garnettii
ENSLOCG00000002628	srp72	97	77.727	ENSOARG00000004329	SRP72	97	78.067	Ovis_aries
ENSLOCG00000002628	srp72	98	56.647	ENSPPAG00000011428	-	99	55.572	Pan_paniscus
ENSLOCG00000002628	srp72	82	60.617	ENSPPAG00000032490	-	96	58.596	Pan_paniscus
ENSLOCG00000002628	srp72	97	79.109	ENSPPAG00000042265	SRP72	97	78.988	Pan_paniscus
ENSLOCG00000002628	srp72	95	78.972	ENSPPRG00000015991	SRP72	97	79.294	Panthera_pardus
ENSLOCG00000002628	srp72	95	78.972	ENSPTIG00000018786	SRP72	97	79.294	Panthera_tigris_altaica
ENSLOCG00000002628	srp72	98	58.574	ENSPTRG00000048100	-	99	57.413	Pan_troglodytes
ENSLOCG00000002628	srp72	97	79.109	ENSPTRG00000048466	-	97	78.988	Pan_troglodytes
ENSLOCG00000002628	srp72	80	61.381	ENSPTRG00000043609	-	96	58.596	Pan_troglodytes
ENSLOCG00000002628	srp72	97	78.955	ENSPANG00000005495	SRP72	97	78.834	Papio_anubis
ENSLOCG00000002628	srp72	93	63.291	ENSPANG00000030230	-	97	63.738	Papio_anubis
ENSLOCG00000002628	srp72	93	79.233	ENSPSIG00000003003	SRP72	97	79.582	Pelodiscus_sinensis
ENSLOCG00000002628	srp72	95	78.037	ENSPEMG00000012828	-	97	77.863	Peromyscus_maniculatus_bairdii
ENSLOCG00000002628	srp72	98	77.238	ENSPCIG00000000732	SRP72	98	77.273	Phascolarctos_cinereus
ENSLOCG00000002628	srp72	98	82.879	ENSPFOG00000003480	srp72	98	83.053	Poecilia_formosa
ENSLOCG00000002628	srp72	98	83.030	ENSPLAG00000020122	srp72	98	83.206	Poecilia_latipinna
ENSLOCG00000002628	srp72	98	82.424	ENSPMEG00000019988	srp72	98	82.595	Poecilia_mexicana
ENSLOCG00000002628	srp72	98	83.030	ENSPREG00000006218	srp72	98	83.206	Poecilia_reticulata
ENSLOCG00000002628	srp72	97	78.604	ENSPPYG00000014752	-	76	78.843	Pongo_abelii
ENSLOCG00000002628	srp72	56	63.613	ENSPPYG00000009152	-	96	62.924	Pongo_abelii
ENSLOCG00000002628	srp72	97	76.959	ENSPVAG00000005590	SRP72	97	77.301	Pteropus_vampyrus
ENSLOCG00000002628	srp72	98	83.460	ENSPNYG00000001916	srp72	98	83.639	Pundamilia_nyererei
ENSLOCG00000002628	srp72	98	84.627	ENSPNAG00000022424	srp72	98	84.816	Pygocentrus_nattereri
ENSLOCG00000002628	srp72	97	77.112	ENSRNOG00000002100	LOC108348180	97	77.454	Rattus_norvegicus
ENSLOCG00000002628	srp72	97	73.579	ENSRBIG00000042069	SRP72	97	73.620	Rhinopithecus_bieti
ENSLOCG00000002628	srp72	98	61.631	ENSRBIG00000029328	-	98	61.724	Rhinopithecus_bieti
ENSLOCG00000002628	srp72	97	78.955	ENSRROG00000035704	SRP72	97	78.834	Rhinopithecus_roxellana
ENSLOCG00000002628	srp72	92	77.814	ENSSHAG00000000614	SRP72	97	75.267	Sarcophilus_harrisii
ENSLOCG00000002628	srp72	97	86.043	ENSSFOG00015002026	srp72	98	86.043	Scleropages_formosus
ENSLOCG00000002628	srp72	98	82.175	ENSSMAG00000007639	srp72	98	82.648	Scophthalmus_maximus
ENSLOCG00000002628	srp72	98	83.812	ENSSDUG00000007345	srp72	96	84.332	Seriola_dumerili
ENSLOCG00000002628	srp72	98	83.812	ENSSLDG00000021819	srp72	98	83.257	Seriola_lalandi_dorsalis
ENSLOCG00000002628	srp72	73	75.263	ENSSARG00000005804	SRP72	74	75.066	Sorex_araneus
ENSLOCG00000002628	srp72	95	78.816	ENSSPUG00000009740	SRP72	97	78.528	Sphenodon_punctatus
ENSLOCG00000002628	srp72	98	83.308	ENSSPAG00000011565	srp72	98	83.792	Stegastes_partitus
ENSLOCG00000002628	srp72	98	75.532	ENSSSCG00000008900	SRP72	97	75.613	Sus_scrofa
ENSLOCG00000002628	srp72	95	80.093	ENSTGUG00000004767	SRP72	97	79.326	Taeniopygia_guttata
ENSLOCG00000002628	srp72	97	80.982	ENSTRUG00000009831	srp72	98	80.982	Takifugu_rubripes
ENSLOCG00000002628	srp72	98	81.241	ENSTNIG00000013073	srp72	97	81.402	Tetraodon_nigroviridis
ENSLOCG00000002628	srp72	87	71.930	ENSTBEG00000007394	SRP72	88	71.930	Tupaia_belangeri
ENSLOCG00000002628	srp72	92	77.508	ENSTTRG00000010945	SRP72	98	77.868	Tursiops_truncatus
ENSLOCG00000002628	srp72	57	78.478	ENSUAMG00000001701	SRP72	96	79.058	Ursus_americanus
ENSLOCG00000002628	srp72	95	78.816	ENSUMAG00000008151	SRP72	97	78.834	Ursus_maritimus
ENSLOCG00000002628	srp72	97	76.959	ENSVPAG00000000458	SRP72	97	77.301	Vicugna_pacos
ENSLOCG00000002628	srp72	97	78.802	ENSVVUG00000006020	SRP72	97	79.141	Vulpes_vulpes
ENSLOCG00000002628	srp72	92	75.523	ENSXETG00000010205	srp72	98	75.402	Xenopus_tropicalis
ENSLOCG00000002628	srp72	98	82.451	ENSXMAG00000018000	srp72	98	82.040	Xiphophorus_maculatus