EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002680 (Gene tree)
Gene ID: 102684068
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 17506 bases
Position: chrLG9:1790358-1807863
Accession: 102684068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003144	MMR_HSR1	PF01926.23	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003151	-	2988	XM_006633872	ENSLOCP00000003144	248 (aa)	XP_006633935	W5M436

Gene Model

Click here to download ENSLOCG00000002680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002680	rab12	65	30.061	ENSLOCG00000010440	nras	92	31.285
ENSLOCG00000002680	rab12	82	39.130	ENSLOCG00000003453	rab42a	84	41.899
ENSLOCG00000002680	rab12	72	30.688	ENSLOCG00000016767	rabl2	81	30.688
ENSLOCG00000002680	rab12	79	45.178	ENSLOCG00000014692	zgc:171927	83	48.023
ENSLOCG00000002680	rab12	84	36.792	ENSLOCG00000005509	rab14	80	41.040
ENSLOCG00000002680	rab12	80	37.799	ENSLOCG00000003467	si:dkey-34d22.5	79	39.412
ENSLOCG00000002680	rab12	71	37.778	ENSLOCG00000015825	-	84	37.778
ENSLOCG00000002680	rab12	83	39.234	ENSLOCG00000008865	rab11al	76	43.636
ENSLOCG00000002680	rab12	63	30.573	ENSLOCG00000001886	mras	80	32.164
ENSLOCG00000002680	rab12	66	40.120	ENSLOCG00000017482	rab9b	82	40.120
ENSLOCG00000002680	rab12	69	41.143	ENSLOCG00000005904	zgc:101559	74	41.143
ENSLOCG00000002680	rab12	67	44.311	ENSLOCG00000014927	rab39bb	76	44.311
ENSLOCG00000002680	rab12	68	44.706	ENSLOCG00000006748	-	79	44.706
ENSLOCG00000002680	rab12	67	47.590	ENSLOCG00000001637	rab35b	80	47.590
ENSLOCG00000002680	rab12	67	34.503	ENSLOCG00000014749	si:dkey-13a21.4	81	34.911
ENSLOCG00000002680	rab12	66	33.537	ENSLOCG00000007682	rhebl1	88	33.537
ENSLOCG00000002680	rab12	81	36.893	ENSLOCG00000014547	RAB7A	81	38.462
ENSLOCG00000002680	rab12	62	43.137	ENSLOCG00000008881	rab25a	88	43.137
ENSLOCG00000002680	rab12	83	38.863	ENSLOCG00000013835	rab11a	75	43.636
ENSLOCG00000002680	rab12	60	30.464	ENSLOCG00000000684	hrasb	86	31.737
ENSLOCG00000002680	rab12	79	44.388	ENSLOCG00000012406	rab15	83	46.893
ENSLOCG00000002680	rab12	68	50.296	ENSLOCG00000016037	rab1ab	82	50.296
ENSLOCG00000002680	rab12	66	34.731	ENSLOCG00000017414	rab9a	83	34.731
ENSLOCG00000002680	rab12	67	39.053	ENSLOCG00000015576	zgc:100918	82	39.053
ENSLOCG00000002680	rab12	75	38.743	ENSLOCG00000015358	rab33a	67	41.718
ENSLOCG00000002680	rab12	66	50.610	ENSLOCG00000007491	rab18a	79	50.610
ENSLOCG00000002680	rab12	79	30.198	ENSLOCG00000014119	rasl11b	75	30.556
ENSLOCG00000002680	rab12	65	31.677	ENSLOCG00000017761	rasd4	77	31.677
ENSLOCG00000002680	rab12	67	32.335	ENSLOCG00000010004	rheb	89	32.335
ENSLOCG00000002680	rab12	68	33.918	ENSLOCG00000017737	-	84	33.918
ENSLOCG00000002680	rab12	70	35.838	ENSLOCG00000007029	rab22a	87	35.838
ENSLOCG00000002680	rab12	72	38.547	ENSLOCG00000006591	rab5ab	81	38.547
ENSLOCG00000002680	rab12	60	32.450	ENSLOCG00000015334	kras	86	33.533
ENSLOCG00000002680	rab12	75	38.421	ENSLOCG00000010535	rab33ba	81	38.298
ENSLOCG00000002680	rab12	66	40.120	ENSLOCG00000018352	rab9b	82	40.120
ENSLOCG00000002680	rab12	69	47.093	ENSLOCG00000005884	rab30	81	48.193
ENSLOCG00000002680	rab12	68	44.643	ENSLOCG00000005108	rab2a	79	44.643
ENSLOCG00000002680	rab12	63	37.037	ENSLOCG00000005802	rab34a	60	37.037
ENSLOCG00000002680	rab12	62	37.662	ENSLOCG00000016999	rab23	68	37.349
ENSLOCG00000002680	rab12	81	36.634	ENSLOCG00000015191	rab41	75	40.252
ENSLOCG00000002680	rab12	69	38.953	ENSLOCG00000012566	rab5c	78	38.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002680	rab12	100	85.081	ENSG00000206418	RAB12	100	85.141	Homo_sapiens
ENSLOCG00000002680	rab12	90	82.883	ENSAMEG00000007452	RAB12	97	82.222	Ailuropoda_melanoleuca
ENSLOCG00000002680	rab12	100	87.097	ENSACIG00000020616	rab12	93	87.336	Amphilophus_citrinellus
ENSLOCG00000002680	rab12	100	86.290	ENSAOCG00000002130	rab12	100	82.258	Amphiprion_ocellaris
ENSLOCG00000002680	rab12	100	86.290	ENSAPEG00000013255	rab12	100	82.258	Amphiprion_percula
ENSLOCG00000002680	rab12	100	87.097	ENSATEG00000019683	rab12	93	86.900	Anabas_testudineus
ENSLOCG00000002680	rab12	89	89.140	ENSACAG00000003360	RAB12	88	88.938	Anolis_carolinensis
ENSLOCG00000002680	rab12	100	87.903	ENSACLG00000007696	rab12	100	83.871	Astatotilapia_calliptera
ENSLOCG00000002680	rab12	100	84.739	ENSAMXG00000004882	rab12	93	85.217	Astyanax_mexicanus
ENSLOCG00000002680	rab12	90	89.732	ENSBTAG00000010356	RAB12	95	87.554	Bos_taurus
ENSLOCG00000002680	rab12	100	85.887	ENSCJAG00000015468	RAB12	72	85.887	Callithrix_jacchus
ENSLOCG00000002680	rab12	100	85.081	ENSCAFG00020023721	RAB12	84	85.141	Canis_lupus_dingo
ENSLOCG00000002680	rab12	90	89.732	ENSCHIG00000016103	RAB12	95	87.554	Capra_hircus
ENSLOCG00000002680	rab12	85	90.476	ENSCPOG00000022689	RAB12	100	90.476	Cavia_porcellus
ENSLOCG00000002680	rab12	100	85.887	ENSCCAG00000022862	RAB12	100	85.887	Cebus_capucinus
ENSLOCG00000002680	rab12	90	89.732	ENSCATG00000037784	RAB12	95	88.261	Cercocebus_atys
ENSLOCG00000002680	rab12	100	85.887	ENSCSAG00000017569	RAB12	72	85.887	Chlorocebus_sabaeus
ENSLOCG00000002680	rab12	100	85.484	ENSCPBG00000028375	RAB12	92	90.265	Chrysemys_picta_bellii
ENSLOCG00000002680	rab12	89	89.545	ENSCANG00000031453	RAB12	100	89.545	Colobus_angolensis_palliatus
ENSLOCG00000002680	rab12	100	84.337	ENSCGRG00001006958	Rab12	76	89.286	Cricetulus_griseus_chok1gshd
ENSLOCG00000002680	rab12	100	86.290	ENSCSEG00000016933	rab12	100	83.871	Cynoglossus_semilaevis
ENSLOCG00000002680	rab12	100	85.081	ENSCVAG00000003539	rab12	100	83.936	Cyprinodon_variegatus
ENSLOCG00000002680	rab12	100	83.871	ENSDARG00000089428	rab12	88	90.821	Danio_rerio
ENSLOCG00000002680	rab12	90	89.286	ENSDNOG00000046064	RAB12	53	87.826	Dasypus_novemcinctus
ENSLOCG00000002680	rab12	91	89.778	ENSDORG00000008920	Rab12	99	89.778	Dipodomys_ordii
ENSLOCG00000002680	rab12	78	65.979	ENSEBUG00000006581	rab12	92	66.667	Eptatretus_burgeri
ENSLOCG00000002680	rab12	100	85.484	ENSEASG00005002926	RAB12	83	84.677	Equus_asinus_asinus
ENSLOCG00000002680	rab12	100	84.677	ENSECAG00000007384	RAB12	71	84.677	Equus_caballus
ENSLOCG00000002680	rab12	100	85.081	ENSELUG00000007123	rab12	93	84.716	Esox_lucius
ENSLOCG00000002680	rab12	100	85.081	ENSFCAG00000027710	RAB12	72	85.141	Felis_catus
ENSLOCG00000002680	rab12	100	86.290	ENSFHEG00000004319	rab12	100	84.274	Fundulus_heteroclitus
ENSLOCG00000002680	rab12	85	84.906	ENSGMOG00000012335	rab12	87	84.906	Gadus_morhua
ENSLOCG00000002680	rab12	91	88.938	ENSGALG00000033608	RAB12	90	88.938	Gallus_gallus
ENSLOCG00000002680	rab12	89	85.520	ENSGACG00000016639	rab12	100	85.520	Gasterosteus_aculeatus
ENSLOCG00000002680	rab12	100	85.484	ENSGAGG00000007278	RAB12	92	90.265	Gopherus_agassizii
ENSLOCG00000002680	rab12	100	87.903	ENSHBUG00000008497	rab12	100	83.871	Haplochromis_burtoni
ENSLOCG00000002680	rab12	96	84.937	ENSHGLG00000006189	RAB12	86	89.545	Heterocephalus_glaber_female
ENSLOCG00000002680	rab12	100	84.000	ENSHCOG00000012376	rab12	100	82.258	Hippocampus_comes
ENSLOCG00000002680	rab12	92	90.308	ENSIPUG00000017401	rab12	94	84.549	Ictalurus_punctatus
ENSLOCG00000002680	rab12	90	88.789	ENSSTOG00000025122	RAB12	98	89.189	Ictidomys_tridecemlineatus
ENSLOCG00000002680	rab12	91	89.381	ENSJJAG00000019064	Rab12	99	89.381	Jaculus_jaculus
ENSLOCG00000002680	rab12	100	84.677	ENSKMAG00000020056	rab12	93	85.153	Kryptolebias_marmoratus
ENSLOCG00000002680	rab12	100	85.887	ENSLBEG00000013756	rab12	100	83.065	Labrus_bergylta
ENSLOCG00000002680	rab12	90	91.480	ENSLACG00000010461	RAB12	94	89.700	Latimeria_chalumnae
ENSLOCG00000002680	rab12	100	85.484	ENSMFAG00000043551	RAB12	100	85.081	Macaca_fascicularis
ENSLOCG00000002680	rab12	90	89.732	ENSMNEG00000040853	RAB12	91	88.261	Macaca_nemestrina
ENSLOCG00000002680	rab12	100	86.694	ENSMAMG00000006862	rab12	100	83.871	Mastacembelus_armatus
ENSLOCG00000002680	rab12	100	87.903	ENSMZEG00005024316	rab12	100	83.871	Maylandia_zebra
ENSLOCG00000002680	rab12	82	89.706	ENSMGAG00000009197	RAB12	100	89.706	Meleagris_gallopavo
ENSLOCG00000002680	rab12	100	84.337	ENSMAUG00000008371	Rab12	76	89.286	Mesocricetus_auratus
ENSLOCG00000002680	rab12	90	89.286	ENSMICG00000030661	RAB12	98	87.607	Microcebus_murinus
ENSLOCG00000002680	rab12	88	89.498	ENSMOCG00000000452	Rab12	100	89.498	Microtus_ochrogaster
ENSLOCG00000002680	rab12	92	88.210	ENSMODG00000021452	RAB12	68	88.261	Monodelphis_domestica
ENSLOCG00000002680	rab12	100	85.484	ENSMALG00000015762	rab12	93	85.590	Monopterus_albus
ENSLOCG00000002680	rab12	100	84.337	MGP_CAROLIEiJ_G0021839	Rab12	77	89.732	Mus_caroli
ENSLOCG00000002680	rab12	100	84.337	ENSMUSG00000023460	Rab12	95	87.931	Mus_musculus
ENSLOCG00000002680	rab12	100	84.337	MGP_PahariEiJ_G0020826	Rab12	95	87.931	Mus_pahari
ENSLOCG00000002680	rab12	100	84.337	MGP_SPRETEiJ_G0022750	Rab12	77	89.732	Mus_spretus
ENSLOCG00000002680	rab12	100	84.677	ENSMLUG00000002883	RAB12	100	84.677	Myotis_lucifugus
ENSLOCG00000002680	rab12	95	86.441	ENSNGAG00000024103	-	97	88.938	Nannospalax_galili
ENSLOCG00000002680	rab12	90	78.571	ENSNGAG00000019722	-	95	76.824	Nannospalax_galili
ENSLOCG00000002680	rab12	100	87.903	ENSNBRG00000014428	rab12	100	83.871	Neolamprologus_brichardi
ENSLOCG00000002680	rab12	100	85.081	ENSNLEG00000006939	RAB12	100	85.141	Nomascus_leucogenys
ENSLOCG00000002680	rab12	100	85.081	ENSMEUG00000000493	RAB12	93	88.261	Notamacropus_eugenii
ENSLOCG00000002680	rab12	88	89.954	ENSODEG00000006414	RAB12	100	89.954	Octodon_degus
ENSLOCG00000002680	rab12	100	87.500	ENSONIG00000018469	rab12	93	87.336	Oreochromis_niloticus
ENSLOCG00000002680	rab12	100	86.694	ENSORLG00000003902	rab12	100	82.661	Oryzias_latipes
ENSLOCG00000002680	rab12	100	86.290	ENSORLG00020005131	rab12	93	86.026	Oryzias_latipes_hni
ENSLOCG00000002680	rab12	100	86.290	ENSORLG00015007869	rab12	100	82.661	Oryzias_latipes_hsok
ENSLOCG00000002680	rab12	100	87.500	ENSOMEG00000008191	rab12	100	83.468	Oryzias_melastigma
ENSLOCG00000002680	rab12	85	90.476	ENSOGAG00000028002	RAB12	99	90.476	Otolemur_garnettii
ENSLOCG00000002680	rab12	85	90.000	ENSOARG00000000728	RAB12	93	85.903	Ovis_aries
ENSLOCG00000002680	rab12	83	90.338	ENSPPAG00000009152	RAB12	97	90.777	Pan_paniscus
ENSLOCG00000002680	rab12	100	85.081	ENSPPRG00000024521	RAB12	100	85.141	Panthera_pardus
ENSLOCG00000002680	rab12	100	85.081	ENSPTRG00000009853	RAB12	100	85.141	Pan_troglodytes
ENSLOCG00000002680	rab12	100	86.290	ENSPANG00000009320	RAB12	100	86.290	Papio_anubis
ENSLOCG00000002680	rab12	87	90.698	ENSPKIG00000008579	rab12	100	85.081	Paramormyrops_kingsleyae
ENSLOCG00000002680	rab12	100	82.661	ENSPMGG00000001890	rab12	93	84.279	Periophthalmus_magnuspinnatus
ENSLOCG00000002680	rab12	100	84.739	ENSPEMG00000021032	Rab12	77	89.732	Peromyscus_maniculatus_bairdii
ENSLOCG00000002680	rab12	100	85.081	ENSPCIG00000010453	RAB12	57	88.261	Phascolarctos_cinereus
ENSLOCG00000002680	rab12	100	85.484	ENSPFOG00000001579	rab12	100	83.468	Poecilia_formosa
ENSLOCG00000002680	rab12	100	85.484	ENSPLAG00000013594	rab12	100	83.468	Poecilia_latipinna
ENSLOCG00000002680	rab12	100	85.484	ENSPMEG00000010417	rab12	100	83.468	Poecilia_mexicana
ENSLOCG00000002680	rab12	100	85.887	ENSPREG00000017487	rab12	100	83.871	Poecilia_reticulata
ENSLOCG00000002680	rab12	100	84.274	ENSPPYG00000009015	-	72	85.141	Pongo_abelii
ENSLOCG00000002680	rab12	100	84.274	ENSPCAG00000015007	RAB12	95	87.879	Procavia_capensis
ENSLOCG00000002680	rab12	100	84.677	ENSPCOG00000019816	RAB12	100	84.739	Propithecus_coquereli
ENSLOCG00000002680	rab12	100	84.677	ENSPVAG00000002757	RAB12	100	84.739	Pteropus_vampyrus
ENSLOCG00000002680	rab12	100	87.903	ENSPNYG00000005654	rab12	100	83.871	Pundamilia_nyererei
ENSLOCG00000002680	rab12	100	87.903	ENSPNYG00000023905	rab12	100	83.871	Pundamilia_nyererei
ENSLOCG00000002680	rab12	100	85.542	ENSPNAG00000015031	rab12	93	86.087	Pygocentrus_nattereri
ENSLOCG00000002680	rab12	92	83.550	ENSRNOG00000019295	Rab12	84	88.835	Rattus_norvegicus
ENSLOCG00000002680	rab12	90	89.732	ENSRBIG00000028760	RAB12	99	88.261	Rhinopithecus_bieti
ENSLOCG00000002680	rab12	91	89.381	ENSRROG00000019249	RAB12	95	89.381	Rhinopithecus_roxellana
ENSLOCG00000002680	rab12	92	83.700	ENSSBOG00000021125	RAB12	88	83.043	Saimiri_boliviensis_boliviensis
ENSLOCG00000002680	rab12	92	83.772	ENSSHAG00000001489	RAB12	93	87.143	Sarcophilus_harrisii
ENSLOCG00000002680	rab12	100	84.677	ENSSMAG00000012678	rab12	100	83.065	Scophthalmus_maximus
ENSLOCG00000002680	rab12	100	87.097	ENSSDUG00000008505	rab12	100	84.274	Seriola_dumerili
ENSLOCG00000002680	rab12	100	87.097	ENSSLDG00000022239	rab12	100	84.274	Seriola_lalandi_dorsalis
ENSLOCG00000002680	rab12	90	89.686	ENSSPUG00000003222	RAB12	92	89.823	Sphenodon_punctatus
ENSLOCG00000002680	rab12	100	86.694	ENSSPAG00000010822	rab12	93	86.463	Stegastes_partitus
ENSLOCG00000002680	rab12	100	85.081	ENSSSCG00000038026	RAB12	100	85.081	Sus_scrofa
ENSLOCG00000002680	rab12	91	88.938	ENSTGUG00000009889	RAB12	90	88.938	Taeniopygia_guttata
ENSLOCG00000002680	rab12	100	84.274	ENSTRUG00000024455	rab12	85	90.291	Takifugu_rubripes
ENSLOCG00000002680	rab12	100	85.081	ENSTNIG00000014859	rab12	100	81.452	Tetraodon_nigroviridis
ENSLOCG00000002680	rab12	90	89.189	ENSTTRG00000008711	RAB12	100	89.189	Tursiops_truncatus
ENSLOCG00000002680	rab12	100	85.081	ENSUAMG00000018092	RAB12	100	85.141	Ursus_americanus
ENSLOCG00000002680	rab12	91	88.000	ENSVVUG00000011748	RAB12	100	88.000	Vulpes_vulpes
ENSLOCG00000002680	rab12	100	84.739	ENSXETG00000004289	rab12	79	84.739	Xenopus_tropicalis
ENSLOCG00000002680	rab12	100	85.484	ENSXCOG00000019310	rab12	100	81.855	Xiphophorus_couchianus
ENSLOCG00000002680	rab12	100	85.887	ENSXMAG00000023617	rab12	100	83.871	Xiphophorus_maculatus