EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002687 (Gene tree)
Gene ID: 102686698
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5388 bases
Position: chrLG18:6175471-6180858
Accession: 102686698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003155	LSM	PF01423.22	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003162	-	1109	XM_006639532	ENSLOCP00000003155	238 (aa)	XP_015220222	W5M447

Gene Model

Click here to download ENSLOCG00000002687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002687's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002687	snrpb	70	95.238	ENSG00000125835	SNRPB	74	100.000	Homo_sapiens
ENSLOCG00000002687	snrpb	99	97.899	ENSAPOG00000019606	snrpb	81	97.899	Acanthochromis_polyacanthus
ENSLOCG00000002687	snrpb	69	95.210	ENSAMEG00000011353	SNRPB	69	94.012	Ailuropoda_melanoleuca
ENSLOCG00000002687	snrpb	93	97.758	ENSACIG00000014480	snrpb	99	97.758	Amphilophus_citrinellus
ENSLOCG00000002687	snrpb	99	97.479	ENSAOCG00000006876	snrpb	99	97.479	Amphiprion_ocellaris
ENSLOCG00000002687	snrpb	99	97.479	ENSAPEG00000021585	snrpb	99	97.479	Amphiprion_percula
ENSLOCG00000002687	snrpb	99	97.059	ENSATEG00000009836	snrpb	99	97.059	Anabas_testudineus
ENSLOCG00000002687	snrpb	66	96.250	ENSACAG00000002053	SNRPB	69	95.000	Anolis_carolinensis
ENSLOCG00000002687	snrpb	96	88.312	ENSANAG00000036271	-	68	85.714	Aotus_nancymaae
ENSLOCG00000002687	snrpb	70	95.238	ENSANAG00000024443	-	73	94.048	Aotus_nancymaae
ENSLOCG00000002687	snrpb	99	97.899	ENSACLG00000014707	snrpb	99	97.899	Astatotilapia_calliptera
ENSLOCG00000002687	snrpb	100	98.739	ENSAMXG00000029434	snrpb	100	98.739	Astyanax_mexicanus
ENSLOCG00000002687	snrpb	91	84.163	ENSBTAG00000001038	SNRPB	73	94.048	Bos_taurus
ENSLOCG00000002687	snrpb	70	95.238	ENSCJAG00000020971	-	73	94.048	Callithrix_jacchus
ENSLOCG00000002687	snrpb	89	86.916	ENSCJAG00000023097	-	70	87.500	Callithrix_jacchus
ENSLOCG00000002687	snrpb	70	95.238	ENSCAFG00000006693	-	73	94.048	Canis_familiaris
ENSLOCG00000002687	snrpb	76	82.065	ENSCAFG00000031109	-	70	82.249	Canis_familiaris
ENSLOCG00000002687	snrpb	70	95.238	ENSCAFG00020016981	-	70	94.048	Canis_lupus_dingo
ENSLOCG00000002687	snrpb	76	95.082	ENSCHIG00000025449	-	73	94.048	Capra_hircus
ENSLOCG00000002687	snrpb	70	95.238	ENSTSYG00000014498	-	73	94.048	Carlito_syrichta
ENSLOCG00000002687	snrpb	97	73.913	ENSTSYG00000032303	-	55	76.667	Carlito_syrichta
ENSLOCG00000002687	snrpb	69	95.210	ENSCAPG00000012669	SNRPB	73	94.012	Cavia_aperea
ENSLOCG00000002687	snrpb	70	95.238	ENSCPOG00000039408	SNRPB	73	94.048	Cavia_porcellus
ENSLOCG00000002687	snrpb	53	84.252	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSLOCG00000002687	snrpb	70	95.238	ENSCCAG00000026002	SNRPB	73	94.048	Cebus_capucinus
ENSLOCG00000002687	snrpb	70	95.238	ENSCATG00000030230	SNRPB	73	94.048	Cercocebus_atys
ENSLOCG00000002687	snrpb	70	95.238	ENSCLAG00000012442	SNRPB	71	94.048	Chinchilla_lanigera
ENSLOCG00000002687	snrpb	70	95.238	ENSCSAG00000010840	SNRPB	73	94.048	Chlorocebus_sabaeus
ENSLOCG00000002687	snrpb	100	97.500	ENSCPBG00000026801	SNRPB	100	97.500	Chrysemys_picta_bellii
ENSLOCG00000002687	snrpb	70	95.238	ENSCANG00000019461	SNRPB	73	94.048	Colobus_angolensis_palliatus
ENSLOCG00000002687	snrpb	70	95.238	ENSCGRG00001023046	Snrpb	73	94.048	Cricetulus_griseus_chok1gshd
ENSLOCG00000002687	snrpb	68	95.092	ENSCGRG00000010423	Snrpb	71	93.750	Cricetulus_griseus_crigri
ENSLOCG00000002687	snrpb	99	98.729	ENSCSEG00000020328	snrpb	99	98.729	Cynoglossus_semilaevis
ENSLOCG00000002687	snrpb	99	99.153	ENSDARG00000011125	snrpb	99	99.153	Danio_rerio
ENSLOCG00000002687	snrpb	70	95.238	ENSDNOG00000015545	-	70	94.048	Dasypus_novemcinctus
ENSLOCG00000002687	snrpb	70	89.286	ENSDNOG00000007896	-	69	88.095	Dasypus_novemcinctus
ENSLOCG00000002687	snrpb	74	94.915	ENSDORG00000029558	Snrpb	70	93.827	Dipodomys_ordii
ENSLOCG00000002687	snrpb	63	69.799	FBgn0262601	SmB	74	69.799	Drosophila_melanogaster
ENSLOCG00000002687	snrpb	75	80.978	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSLOCG00000002687	snrpb	70	94.643	ENSEASG00005012991	SNRPB	73	93.452	Equus_asinus_asinus
ENSLOCG00000002687	snrpb	70	95.238	ENSECAG00000011944	SNRPB	73	94.048	Equus_caballus
ENSLOCG00000002687	snrpb	70	95.238	ENSEEUG00000015568	SNRPB	59	94.048	Erinaceus_europaeus
ENSLOCG00000002687	snrpb	100	98.319	ENSELUG00000014564	snrpb	100	98.319	Esox_lucius
ENSLOCG00000002687	snrpb	70	95.238	ENSFCAG00000034090	-	73	94.048	Felis_catus
ENSLOCG00000002687	snrpb	97	96.983	ENSFALG00000004866	SNRPB	100	96.983	Ficedula_albicollis
ENSLOCG00000002687	snrpb	70	95.238	ENSFDAG00000009937	SNRPB	73	94.048	Fukomys_damarensis
ENSLOCG00000002687	snrpb	100	97.083	ENSGALG00000035421	SNRPN	100	97.083	Gallus_gallus
ENSLOCG00000002687	snrpb	71	98.824	ENSGAFG00000019558	snrpb	72	98.788	Gambusia_affinis
ENSLOCG00000002687	snrpb	99	97.881	ENSGACG00000003262	snrpb	99	97.881	Gasterosteus_aculeatus
ENSLOCG00000002687	snrpb	100	97.500	ENSGAGG00000001308	SNRPB	100	97.500	Gopherus_agassizii
ENSLOCG00000002687	snrpb	70	95.238	ENSGGOG00000016138	SNRPB	73	94.048	Gorilla_gorilla
ENSLOCG00000002687	snrpb	99	97.899	ENSHBUG00000008369	snrpb	99	97.899	Haplochromis_burtoni
ENSLOCG00000002687	snrpb	70	95.238	ENSHGLG00000016241	-	73	94.048	Heterocephalus_glaber_female
ENSLOCG00000002687	snrpb	63	86.667	ENSHGLG00000016505	-	72	86.667	Heterocephalus_glaber_female
ENSLOCG00000002687	snrpb	63	86.667	ENSHGLG00100004178	-	72	86.667	Heterocephalus_glaber_male
ENSLOCG00000002687	snrpb	70	95.238	ENSHGLG00100012877	-	73	94.048	Heterocephalus_glaber_male
ENSLOCG00000002687	snrpb	99	98.305	ENSHCOG00000014888	snrpb	99	98.305	Hippocampus_comes
ENSLOCG00000002687	snrpb	100	99.580	ENSIPUG00000024569	SNRPB	100	99.580	Ictalurus_punctatus
ENSLOCG00000002687	snrpb	70	93.452	ENSSTOG00000033664	-	70	92.262	Ictidomys_tridecemlineatus
ENSLOCG00000002687	snrpb	90	78.505	ENSSTOG00000027821	-	62	95.588	Ictidomys_tridecemlineatus
ENSLOCG00000002687	snrpb	70	95.238	ENSJJAG00000024170	Snrpb	73	94.048	Jaculus_jaculus
ENSLOCG00000002687	snrpb	95	97.380	ENSKMAG00000014494	snrpb	93	97.380	Kryptolebias_marmoratus
ENSLOCG00000002687	snrpb	99	98.729	ENSLBEG00000005678	snrpb	99	98.729	Labrus_bergylta
ENSLOCG00000002687	snrpb	100	95.833	ENSLACG00000011459	SNRPB	100	95.833	Latimeria_chalumnae
ENSLOCG00000002687	snrpb	76	90.659	ENSLAFG00000017588	SNRPB	71	89.222	Loxodonta_africana
ENSLOCG00000002687	snrpb	70	95.238	ENSMFAG00000038756	SNRPB	73	94.048	Macaca_fascicularis
ENSLOCG00000002687	snrpb	70	95.238	ENSMMUG00000010050	SNRPB	73	94.048	Macaca_mulatta
ENSLOCG00000002687	snrpb	70	95.238	ENSMNEG00000027954	SNRPB	73	94.048	Macaca_nemestrina
ENSLOCG00000002687	snrpb	70	95.238	ENSMLEG00000022346	SNRPB	73	94.048	Mandrillus_leucophaeus
ENSLOCG00000002687	snrpb	99	97.890	ENSMAMG00000009294	snrpb	96	97.890	Mastacembelus_armatus
ENSLOCG00000002687	snrpb	99	97.899	ENSMZEG00005011856	snrpb	99	97.899	Maylandia_zebra
ENSLOCG00000002687	snrpb	75	85.083	ENSMICG00000015983	-	77	83.929	Microcebus_murinus
ENSLOCG00000002687	snrpb	76	95.082	ENSMICG00000016519	SNRPB	73	94.048	Microcebus_murinus
ENSLOCG00000002687	snrpb	58	79.137	ENSMOCG00000021362	-	58	79.137	Microtus_ochrogaster
ENSLOCG00000002687	snrpb	70	94.643	ENSMOCG00000002892	-	73	93.452	Microtus_ochrogaster
ENSLOCG00000002687	snrpb	95	98.673	ENSMMOG00000013226	snrpb	97	98.673	Mola_mola
ENSLOCG00000002687	snrpb	99	97.059	ENSMALG00000020839	snrpb	80	97.059	Monopterus_albus
ENSLOCG00000002687	snrpb	70	95.238	MGP_CAROLIEiJ_G0024293	Snrpb	74	100.000	Mus_caroli
ENSLOCG00000002687	snrpb	70	95.238	ENSMUSG00000027404	Snrpb	74	100.000	Mus_musculus
ENSLOCG00000002687	snrpb	70	95.238	MGP_PahariEiJ_G0025738	Snrpb	74	100.000	Mus_pahari
ENSLOCG00000002687	snrpb	70	95.238	MGP_SPRETEiJ_G0025213	Snrpb	73	100.000	Mus_spretus
ENSLOCG00000002687	snrpb	70	95.238	ENSMPUG00000009283	SNRPB	73	94.048	Mustela_putorius_furo
ENSLOCG00000002687	snrpb	92	90.498	ENSMLUG00000016951	SNRPB	92	90.950	Myotis_lucifugus
ENSLOCG00000002687	snrpb	70	95.238	ENSNGAG00000012051	Snrpb	73	94.048	Nannospalax_galili
ENSLOCG00000002687	snrpb	95	95.633	ENSNBRG00000006353	snrpb	87	95.633	Neolamprologus_brichardi
ENSLOCG00000002687	snrpb	70	95.238	ENSNLEG00000029067	SNRPB	70	94.048	Nomascus_leucogenys
ENSLOCG00000002687	snrpb	69	95.210	ENSMEUG00000015625	SNRPB	74	94.012	Notamacropus_eugenii
ENSLOCG00000002687	snrpb	70	95.238	ENSODEG00000004305	-	73	94.048	Octodon_degus
ENSLOCG00000002687	snrpb	70	89.881	ENSODEG00000016060	-	70	88.690	Octodon_degus
ENSLOCG00000002687	snrpb	99	97.899	ENSONIG00000000248	snrpb	99	97.899	Oreochromis_niloticus
ENSLOCG00000002687	snrpb	89	66.667	ENSOCUG00000026813	-	63	67.568	Oryctolagus_cuniculus
ENSLOCG00000002687	snrpb	74	88.827	ENSOCUG00000022423	-	86	89.286	Oryctolagus_cuniculus
ENSLOCG00000002687	snrpb	76	95.082	ENSOCUG00000014042	-	70	94.048	Oryctolagus_cuniculus
ENSLOCG00000002687	snrpb	89	90.233	ENSOCUG00000021456	-	70	90.476	Oryctolagus_cuniculus
ENSLOCG00000002687	snrpb	89	92.488	ENSOCUG00000028215	-	70	91.667	Oryctolagus_cuniculus
ENSLOCG00000002687	snrpb	74	98.857	ENSORLG00000021862	snrpb	69	99.398	Oryzias_latipes
ENSLOCG00000002687	snrpb	70	95.238	ENSOGAG00000016149	SNRPB	70	94.048	Otolemur_garnettii
ENSLOCG00000002687	snrpb	76	95.082	ENSOARG00000006740	SNRPB	73	94.048	Ovis_aries
ENSLOCG00000002687	snrpb	70	95.238	ENSPPAG00000036314	SNRPB	73	94.048	Pan_paniscus
ENSLOCG00000002687	snrpb	70	95.238	ENSPPRG00000003233	-	73	94.048	Panthera_pardus
ENSLOCG00000002687	snrpb	69	95.210	ENSPTIG00000007468	SNRPB	72	94.012	Panthera_tigris_altaica
ENSLOCG00000002687	snrpb	70	95.238	ENSPTRG00000013176	SNRPB	73	94.048	Pan_troglodytes
ENSLOCG00000002687	snrpb	70	95.238	ENSPANG00000020362	SNRPB	70	94.048	Papio_anubis
ENSLOCG00000002687	snrpb	100	98.739	ENSPKIG00000002865	snrpb	100	98.739	Paramormyrops_kingsleyae
ENSLOCG00000002687	snrpb	99	97.490	ENSPSIG00000014125	SNRPB	98	97.490	Pelodiscus_sinensis
ENSLOCG00000002687	snrpb	74	96.023	ENSPMGG00000016349	snrpb	69	96.894	Periophthalmus_magnuspinnatus
ENSLOCG00000002687	snrpb	70	95.238	ENSPEMG00000007948	Snrpb	73	94.048	Peromyscus_maniculatus_bairdii
ENSLOCG00000002687	snrpb	69	94.611	ENSPCIG00000004694	SNRPB	69	93.413	Phascolarctos_cinereus
ENSLOCG00000002687	snrpb	89	68.545	ENSPREG00000015515	snrpb	62	99.259	Poecilia_reticulata
ENSLOCG00000002687	snrpb	70	95.238	ENSPPYG00000010841	SNRPB	73	94.048	Pongo_abelii
ENSLOCG00000002687	snrpb	70	95.238	ENSPCOG00000013686	SNRPB	73	94.048	Propithecus_coquereli
ENSLOCG00000002687	snrpb	70	94.048	ENSPVAG00000017013	SNRPB	59	92.857	Pteropus_vampyrus
ENSLOCG00000002687	snrpb	99	97.899	ENSPNYG00000014788	snrpb	99	97.899	Pundamilia_nyererei
ENSLOCG00000002687	snrpb	100	99.160	ENSPNAG00000016126	snrpb	100	99.160	Pygocentrus_nattereri
ENSLOCG00000002687	snrpb	70	95.238	ENSRNOG00000006961	Snrpb	73	100.000	Rattus_norvegicus
ENSLOCG00000002687	snrpb	70	95.238	ENSRBIG00000040505	SNRPB	73	94.048	Rhinopithecus_bieti
ENSLOCG00000002687	snrpb	70	95.238	ENSRROG00000036094	SNRPB	73	94.048	Rhinopithecus_roxellana
ENSLOCG00000002687	snrpb	70	95.238	ENSSBOG00000027310	SNRPB	73	94.048	Saimiri_boliviensis_boliviensis
ENSLOCG00000002687	snrpb	70	95.833	ENSSHAG00000010394	SNRPB	70	94.643	Sarcophilus_harrisii
ENSLOCG00000002687	snrpb	100	98.319	ENSSFOG00015002870	snrpb	100	98.319	Scleropages_formosus
ENSLOCG00000002687	snrpb	99	98.305	ENSSMAG00000006766	snrpb	99	98.305	Scophthalmus_maximus
ENSLOCG00000002687	snrpb	99	97.899	ENSSDUG00000018539	snrpb	99	97.899	Seriola_dumerili
ENSLOCG00000002687	snrpb	99	97.899	ENSSLDG00000022391	snrpb	99	97.899	Seriola_lalandi_dorsalis
ENSLOCG00000002687	snrpb	71	77.907	ENSSARG00000003084	SNRPB	74	78.488	Sorex_araneus
ENSLOCG00000002687	snrpb	99	97.490	ENSSPUG00000015659	SNRPB	100	97.490	Sphenodon_punctatus
ENSLOCG00000002687	snrpb	99	97.899	ENSSPAG00000021992	snrpb	99	97.899	Stegastes_partitus
ENSLOCG00000002687	snrpb	76	95.082	ENSSSCG00000040857	-	73	94.048	Sus_scrofa
ENSLOCG00000002687	snrpb	95	74.672	ENSSSCG00000011966	-	77	70.492	Sus_scrofa
ENSLOCG00000002687	snrpb	74	81.356	ENSTGUG00000005684	SNRPB	59	97.857	Taeniopygia_guttata
ENSLOCG00000002687	snrpb	95	98.238	ENSTRUG00000023094	snrpb	99	98.238	Takifugu_rubripes
ENSLOCG00000002687	snrpb	99	98.305	ENSTNIG00000002991	snrpb	99	98.305	Tetraodon_nigroviridis
ENSLOCG00000002687	snrpb	70	95.238	ENSUAMG00000005984	-	80	94.048	Ursus_americanus
ENSLOCG00000002687	snrpb	70	94.643	ENSVVUG00000025654	-	70	93.452	Vulpes_vulpes
ENSLOCG00000002687	snrpb	100	72.917	ENSVVUG00000010086	-	71	75.595	Vulpes_vulpes
ENSLOCG00000002687	snrpb	63	98.667	ENSXETG00000027266	snrpb	63	98.667	Xenopus_tropicalis