EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 1646 bases
Position: chrLG20:3416259-3417904
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003228	RVT_1	PF00078.27	1.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003235	-	1533	-	ENSLOCP00000003228	510 (aa)	-	W5M4C0

Gene Model

Click here to download ENSLOCG00000002743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002743	-	100	39.888	ENSACIG00000009025	-	60	39.888	Amphilophus_citrinellus
ENSLOCG00000002743	-	100	40.449	ENSACIG00000013116	-	53	40.449	Amphilophus_citrinellus
ENSLOCG00000002743	-	100	39.212	ENSCVAG00000004138	-	51	39.212	Cyprinodon_variegatus
ENSLOCG00000002743	-	95	42.085	ENSELUG00000004597	-	54	41.779	Esox_lucius
ENSLOCG00000002743	-	100	38.734	ENSFHEG00000007211	-	52	38.734	Fundulus_heteroclitus
ENSLOCG00000002743	-	100	40.943	ENSFHEG00000022106	-	50	40.672	Fundulus_heteroclitus
ENSLOCG00000002743	-	81	41.149	ENSGMOG00000005227	-	75	41.149	Gadus_morhua
ENSLOCG00000002743	-	62	39.377	ENSGACG00000015045	-	69	39.377	Gasterosteus_aculeatus
ENSLOCG00000002743	-	62	38.527	ENSGACG00000000426	-	68	38.527	Gasterosteus_aculeatus
ENSLOCG00000002743	-	100	42.272	ENSHCOG00000007389	-	50	42.272	Hippocampus_comes
ENSLOCG00000002743	-	100	37.546	ENSLBEG00000003745	-	63	37.546	Labrus_bergylta
ENSLOCG00000002743	-	99	39.922	ENSLACG00000006357	-	64	39.922	Latimeria_chalumnae
ENSLOCG00000002743	-	81	36.768	ENSLACG00000009240	-	74	36.768	Latimeria_chalumnae
ENSLOCG00000002743	-	62	47.191	ENSPSIG00000001947	-	95	47.191	Pelodiscus_sinensis
ENSLOCG00000002743	-	100	34.196	ENSPMGG00000017392	-	56	34.196	Periophthalmus_magnuspinnatus
ENSLOCG00000002743	-	98	35.838	ENSPMGG00000001593	-	53	35.838	Periophthalmus_magnuspinnatus
ENSLOCG00000002743	-	100	38.752	ENSPLAG00000022994	-	50	38.752	Poecilia_latipinna
ENSLOCG00000002743	-	99	39.734	ENSPLAG00000023379	-	63	39.734	Poecilia_latipinna
ENSLOCG00000002743	-	100	38.752	ENSPLAG00000011810	-	50	38.752	Poecilia_latipinna
ENSLOCG00000002743	-	100	38.241	ENSPLAG00000011817	-	51	38.241	Poecilia_latipinna
ENSLOCG00000002743	-	100	39.771	ENSPMEG00000003431	-	50	40.304	Poecilia_mexicana
ENSLOCG00000002743	-	99	43.623	ENSPNAG00000017596	-	56	43.623	Pygocentrus_nattereri
ENSLOCG00000002743	-	100	40.341	ENSXCOG00000008881	-	60	40.341	Xiphophorus_couchianus